Contig 000688:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS068D04Sequence627000688 (4)ref|XP_006346139.1|4e-28PREDICTED: axoneme-associated protein mst101(2)-like [Solanum tuberosum]
JMFS121C02Sequence591000688 (4)ref|XP_004244042.1|2e-72PREDICTED: protein DEK [Solanum lycopersicum]
JMFS155A02Sequence623000688 (4)ref|XP_009602972.1|3e-04PREDICTED: DNA ligase 1 [Nicotiana tomentosiformis] ref|XP_009602973.1| PREDICTE
JMSF016D21Sequence241000688 (4)705011731 (2)ref|XP_009773123.1|1e-24PREDICTED: DNA ligase 1-like [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS121C02+ CGGAAACACCATTAGCTTTTCTTTCATGTTCGGGTTCTTCCT
                      ____________________________________________________________
consensus CGGAAACACCATTAGCTTTTCTTTCATGTTCGGGTTCTTCCT
 
. : . : . : . : . : . :
JMFS121C02+ CTGAGTCATTTTCTGATTCATGTACGTCCTTCTTCTTCTCACCCTTCTTAGATGCACTCT
                      ____________________________________________________________
consensus CTGAGTCATTTTCTGATTCATGTACGTCCTTCTTCTTCTCACCCTTCTTAGATGCACTCT
 
. : . : . : . : . : . :
JMFS121C02+ CAGTCTTGCGACTCTTAGCTGAGCCTTTTGAACTTCCAGAAGCAGAGGATCCACTTTTAT
                      ____________________________________________________________
consensus CAGTCTTGCGACTCTTAGCTGAGCCTTTTGAACTTCCAGAAGCAGAGGATCCACTTTTAT
 
. : . : . : . : . : . :
JMFS121C02+ TGCTAGCCCTCTTACGCTTTCCCTTGCTTGACTGCTCTTTTTCAGCAAGCAGTTCAGAAG
                      ____________________________________________________________
consensus TGCTAGCCCTCTTACGCTTTCCCTTGCTTGACTGCTCTTTTTCAGCAAGCAGTTCAGAAG
 
. : . : . : . : . : . :
JMFS121C02+ TCGTAGCATGAGGTGCCTCCAAAAATTCCATCAACTTTACAACTACATCTTCCTTCTTTG
                      ____________________________________________________________
consensus TCGTAGCATGAGGTGCCTCCAAAAATTCCATCAACTTTACAACTACATCTTCCTTCTTTG
 
. : . : . : . : . : . :
JMFS121C02+ ATGTAGCCTTGGCAACAGGTATGTCAAGTATATCACAGAATTCCATCAATTTCTCTTTTA
                      ____________________________________________________________
consensus ATGTAGCCTTGGCAACAGGTATGTCAAGTATATCACAGAATTCCATCAATTTCTCTTTTA
 
. : . : . : . : . : . :
JMFS121C02+ CACACTTGTCAAATTTTTCTTTAACCTTCATCCTTTGCTTTTCCTCATTGTCATGCCACA
                      ____________________________________________________________
consensus CACACTTGTCAAATTTTTCTTTAACCTTCATCCTTTGCTTTTCCTCATTGTCATGCCACA
 
. : . : . : . : . : . :
JMFS121C02+ CAAAGCCAGAAAACCGTGACAAGTGATTCTTAAATTGAGCTGCCTTTCCTCTCCTTCCAA
                      ____________________________________________________________
consensus CAAAGCCAGAAAACCGTGACAAGTGATTCTTAAATTGAGCTGCCTTTCCTCTCCTTCCAA
 
. : . : . : . : . : . :
JMFS121C02+ AGAGTATTGAATGTAGCATCTTGAATGAATCCTCAGTCTTCTTTCTGGATAATTTATATG
JMFS068D04+ AATGTAGCATCTTGAATGAATCCTCAGTCTTCTTTCTGGATAATTTATATG
                      ____________________________________________________________
consensus AGAGTATTGAATGTAGCATCTTGAATGAATCCTCAGTCTTCTTTCTGGATAATTTATATG
 
. : . : . : . : . : . :
JMFS121C02+ CCACATTTGGTATGTCCTTCAGTGCAGTTCCACGACCCTTTTCTACACGGAATTCCTTGA
JMFS068D04+ CCACATTTGGTATGTCCTTCAGTGCAGTTCCACGACCCTTTTCTACACGGAATTCCTTGA
                      ____________________________________________________________
consensus CCACATTTGGTATGTCCTTCAGTGCAGTTCCACGACCCTTTTCTACACGGAATTCCTTGA
 
. : . : . : . : . : . :
JMFS121C02+ CAGCATCTT
JMFS068D04+ CAGCATCTTTCTCAATGGATGCAACTAGCCTTTCAACTGATTTTCGTTAACGGACAGGAC
                      ____________________________________________________________
consensus CAGCATCTTTCTCAATGGATGCAACTAGCCTTTCAACTGATTTTCGTTAACGGACAGGAC
 
. : . : . : . : . : . :
JMFS068D04+ GGTCAATAGTAGGTGGCATGGGAGTTCTCGGTTCCTTCTCCTTCTTATCTTCCACTGCCT
                      ____________________________________________________________
consensus GGTCAATAGTAGGTGGCATGGGAGTTCTCGGTTCCTTCTCCTTCTTATCTTCCACTGCCT
 
. : . : . : . : . : . :
JMFS068D04+ TTTTCTTCTTTTTGTCTTTCTCCACAGAATTGCTTTTTGATTTAGCATTCTTCTTTGACC
                      ____________________________________________________________
consensus TTTTCTTCTTTTTGTCTTTCTCCACAGAATTGCTTTTTGATTTAGCATTCTTCTTTGACC
 
. : . : . : . : . : . :
JMFS068D04+ CTTTCCCAGCAGTAGGCTTAGGCTCTTCCGCAGTATCCTGTTCTTTTTCCTCCTTCACTG
JMFS155A02+ TCCGCAGTATCCTGTTCTTTTTCCTCCTTCACTG
                      ____________________________________________________________
consensus CTTTCCCAGCAGTAGGCTTAGGCTCTTCCGCAGTATCCTGTTCTTTTTCCTCCTTCACTG
 
. : . : . : . : . : . :
JMFS068D04+ CATCAGCCTCTTTTTCAACTTTACCCTCATCCTCATCCTCATCCTCATCCAGTTTTTCCT
JMFS155A02+ CATCAGCCTCTTTTTCAACTTTACCCTCATCCTCATCCTCATCCTCATCCAGTTTTTCCT
                      ____________________________________________________________
consensus CATCAGCCTCTTTTTCAACTTTACCCTCATCCTCATCCTCATCCTCATCCAGTTTTTCCT
 
. : . : . : . : . : . :
JMFS068D04+ CAGCTTCCTCTTCATCCATTGCCTCACCCTTGTCCTCCAATTTATCATCCTCCACTTTTC
JMFS155A02+ CAGCTTCCTCTTCATCCATTGCCTCACCCTTGTCCTCCAATTTATCATCCTCCACTTTTC
                      ____________________________________________________________
consensus CAGCTTCCTCTTCATCCATTGCCTCACCCTTGTCCTCCAATTTATCATCCTCCACTTTTC
 
. : . : . : . : . : . :
JMFS068D04+ CTTCCTCATCTCCCTTTTCTTCTTTTCCTTCTTCATCATTGCTTTCCTCGTTTCCTTCCT
JMFS155A02+ CTTCCTCATCTCCCTTTTCTTCTTTTCCTTCTTCATCATTGCTTTCCTCGTTTCCTTCCT
                      ____________________________________________________________
consensus CTTCCTCATCTCCCTTTTCTTCTTTTCCTTCTTCATCATTGCTTTCCTCGTTTCCTTCCT
 
. : . : . : . : . : . :
JMFS068D04+ CATCTCCCTTTTCTTCTTTTCCTTCCTCATCTTTGCTTTCCTCGTTTTCCTTCACCTGTC
JMFS155A02+ CATCTCCCTTTTCTTCTTTTCCTTCCTCATCTTTGCTTTCCTCGTTTTCCTTCACCTGTC
                      ____________________________________________________________
consensus CATCTCCCTTTTCTTCTTTTCCTTCCTCATCTTTGCTTTCCTCGTTTTCCTTCACCTGTC
 
. : . : . : . : . : . :
JMFS068D04+ CTTCATCTACATCCATTTTATCAGCATCCAC
JMFS155A02+ CTTCATCTACATCCATTTTATCAGCATCCACCTTATCACTCTCCTGCTTACTATCTTCCT
                      ____________________________________________________________
consensus CTTCATCTACATCCATTTTATCAGCATCCACCTTATCACTCTCCTGCTTACTATCTTCCT
 
. : . : . : . : . : . :
JMFS155A02+ CCATCTCCTTTACACCACTGTCCCCAGTGTCCTTCTTCTCCACAGAAGCTTCACTCTTTT
JMSF016D21+ T
                      ____________________________________________________________
consensus CCATCTCCTTTACACCACTGTCCCCAGTGTCCTTCTTCTCCACAGAAGCTTCACTCTTTT
 
. : . : . : . : . : . :
JMFS155A02+ CCTCCGGTGCTGCATTACCATTCACAGTTGACTCCGGCAATTCAGATACAGTATCTCCCT
JMSF016D21+ CCTCCGGTGCTGCATTACCATTCACAGTNGACTCCGGCAATTCAGATACAGTATCTCCCT
                      ____________________________________________________________
consensus CCTCCGGTGCTGCATTACCATTCACAGTTGACTCCGGCAATTCAGATACAGTATCTCCCT
 
. : . : . : . : . : . :
JMFS155A02+ CCCCCATAACTTACAGCAGCAGAAGCAGTACACCAACACAAAATCTTCTCTCCCAATACG
JMSF016D21+ CCCCCATAACTTACAGCAGCAGAAGCAGTACACCAACACAAAATCTTCTCTCCCAATACG
                      ____________________________________________________________
consensus CCCCCATAACTTACAGCAGCAGAAGCAGTACACCAACACAAAATCTTCTCTCCCAATACG
 
. : . : . : . : . : . :
JMFS155A02+ AAAAACGAGATTTAGAGAGCTGAATTCCACGGCTTTGAGGGCTAACACTCACTCACACTC
JMSF016D21+ AAAAACGAGATTTAGAGAGCTGAATTCCACGGCTTTGAGGGCTAACACTCACTCACACTC
                      ____________________________________________________________
consensus AAAAACGAGATTTAGAGAGCTGAATTCCACGGCTTTGAGGGCTAACACTCACTCACACTC
 
. : . : . : . : . : . :
JMFS155A02+ GTATCAGTGGTTTGTATTTGCCTTTTTTTCTCTCTTTTCAACGATTCCA
JMSF016D21+ GTATCAGTGGTTTGTATTTGCCTTTTTTTCTCTCTTTTCAACGATTCCACACTTCGAATC
                      ____________________________________________________________
consensus GTATCAGTGGTTTGTATTTGCCTTTTTTTCTCTCTTTTCAACGATTCCACACTTCGAATC