Contig 000684:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF027D02Sequence556000684 (5)gb|KHG00634.1|2e-108hypothetical protein F383_17905 [Gossypium arboreum]783012322 (4)gb|KHN44106.1|2e-107Elongation factor G, mitochondrial [Glycine soja]
JMFS034G12Sequence586000684 (5)ref|XP_006347922.1|9e-110PREDICTED: elongation factor G 2, mitochondrial-like [Solanum tuberosum]
JMSF015L04Sequence455000684 (5)ref|XP_006347922.1|1e-63PREDICTED: elongation factor G 2, mitochondrial-like [Solanum tuberosum]747012322 (4)gb|KHN44106.1|8e-99Elongation factor G, mitochondrial [Glycine soja]
JMSF023F22Sequence625000684 (5)ref|XP_006347922.1|2e-111PREDICTED: elongation factor G 2, mitochondrial-like [Solanum tuberosum]734012322 (4)gb|KHN44106.1|8e-104Elongation factor G, mitochondrial [Glycine soja]
JMSF034P23Sequence665000684 (5)ref|XP_006347922.1|1e-115PREDICTED: elongation factor G 2, mitochondrial-like [Solanum tuberosum]640012322 (4)gb|KHN44106.1|5e-85Elongation factor G, mitochondrial [Glycine soja]

Alignment

This contig is upended


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JMFF027D02+                                                  TCTTCACTATTGTTTTGATCA
                      ____________________________________________________________
consensus                                                    TCTTCACTATTGTTTTGATCA
 
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JMFF027D02+           AGAGCATAGTTATTGACTTCAATTGGACAAGGGAGATAATTAAGAACACCATCAAGAAGA
                      ____________________________________________________________
consensus             AGAGCATAGTTATTGACTTCAATTGGACAAGGGAGATAATTAAGAACACCATCAAGAAGA
 
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JMFF027D02+           GGTTGAACGCCCTTGTTCTTGAATGCACTACCCATAAATACGGGCACAAATTCACGTGCT
                      ____________________________________________________________
consensus             GGTTGAACGCCCTTGTTCTTGAATGCACTACCCATAAATACGGGCACAAATTCACGTGCT
 
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JMFF027D02+           ACCGTTGCTCTTCGTATTGCCTCCTCTAGATCATCATTTGATATAGGTTCATCACTCAAA
                      ____________________________________________________________
consensus             ACCGTTGCTCTTCGTATTGCCTCCTCTAGATCATCATTTGATATAGGTTCATCACTCAAA
 
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JMFF027D02+           AATGATTCAGCAAGTTTTTCATCAACCTCAGACACTGCTTCAATAAGCTCACGCCTCTTG
                      ____________________________________________________________
consensus             AATGATTCAGCAAGTTTTTCATCAACCTCAGACACTGCTTCAATAAGCTCACGCCTCTTG
 
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JMFF027D02+           TCTGCAACAAATGCTTCCATATCTGCAGGAATATCTTCTGTGACAACTTTCTCACCACTG
                      ____________________________________________________________
consensus             TCTGCAACAAATGCTTCCATATCTGCAGGAATATCTTCTGTGACAACTTTCTCACCACTG
 
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JMFF027D02+           GAACCATGGAAGTGGTAAGCTTTCATATGCACAAGGTCAATAAGACCCTTGAAGTCATCT
                      ____________________________________________________________
consensus             GAACCATGGAAGTGGTAAGCTTTCATATGCACAAGGTCAATAAGACCCTTGAAGTCATCT
 
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JMFF027D02+           TCTAGCCCAATTGGAACTTGCACTGCAGCAGCATGGTGCCGAAGCTTGGACCTTGCCTGA
                      ____________________________________________________________
consensus             TCTAGCCCAATTGGAACTTGCACTGCAGCAGCATGGTGCCGAAGCTTGGACCTTGCCTGA
 
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JMFF027D02+           TTTAGAACTTTCCATGGGTCTGCCCCCATTCGATCAAGTTTATTGATAAAAGCAAGTCTT
JMSF034P23+                                                                  GTCTT
                      ____________________________________________________________
consensus             TTTAGAACTTTCCATGGGTCTGCCCCCATTCGATCAAGTTTATTGATAAAAGCAAGTCTT
 
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JMFF027D02+           GGAACTTCATATCTTGTCATTTGCCGATCAACAGTGATTGACTGACTCTGCACAC     
JMFS034G12+                                   CGATCAACAGTGATTGACTGACTCTGCACACCACCA
JMSF023F22+                                   CGATCAACAGTGATTGACTGACTCTGCACACCACCA
JMSF034P23+           GGAACTTCATATCTTCTCATTTACCGATCAACAGTGATTGACTGACTCTGCACACCACCA
                      ____________________________________________________________
consensus             GGAACTTCATATCTTGTCATTTGCCGATCAACAGTGATTGACTGACTCTGCACACCACCA
 
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JMFS034G12+           ACACTACAGAGTACAAGAACTGCACCATCAAGAACACGCAACGCCCTCTCAACTTCAATG
JMSF023F22+           ACACTACAGAGTACAAGAACTGCACCATCAAGAACACGCAACGCCCTCTCAACTTCAATG
JMSF034P23+           ACACTACAGAGTACAAGAACTGCACCATCAAGAACACGCAACGCCCTCTCAACTTCAATG
                      ____________________________________________________________
consensus             ACACTACAGAGTACAAGAACTGCACCATCAAGAACACGCAACGCCCTCTCAACTTCAATG
 
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JMFS034G12+           GTGAAATCAACGTGACCTGGAGTGTCAATTATGTTCACCTGGTAGTCTTTCCAAGAACAG
JMSF023F22+           GTGAAATCAACGTGACCTGGAGTGTCAATTATGTTCACCTGGTAGTCTTTCCAAGAACAG
JMSF034P23+           GTGAAATCAACGTGACCTGGAGTGTCAATTATGTTCACCTGGTAGTCTTTCCAAGAACAG
                      ____________________________________________________________
consensus             GTGAAATCAACGTGACCTGGAGTGTCAATTATGTTCACCTGGTAGTCTTTCCAAGAACAG
 
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JMFS034G12+           TAAGTGGCCGCAGACTGAATCGTAATCCCTTTTTCCCTCTCCAAATCCATTGAATCCATC
JMSF023F22+           TAAGTGGCCGCAGACTGAATCGTAATCCCTTTTTCCCTCTCCAAATCCATTGAATCCATC
JMSF034P23+           TAAGTGGCCGCAGACTGAATCGTAATCCCTTTTTCCCTCTCCAAATCCATTGAATCCATC
JMSF015L04+                                    TCCCTTTTTCCCTCTCCAAATCCATTGAATCCATC
                      ____________________________________________________________
consensus             TAAGTGGCCGCAGACTGAATCGTAATCCCTTTTTCCCTCTCCAAATCCATTGAATCCATC
 
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JMFS034G12+           TTAGCTCCAACTCCATCTTTGCCTCTGACCTCATGAATCTCGTGGATCCGACCCGTGTAA
JMSF023F22+           TTAGCTCCAACTCCATCTTTGCCTCTGACCTCATGAATCTCGTGGATCCGACCCGTGTAA
JMSF034P23+           TTAGCTCCAACTCCATCTTTGCCTCTGACCTCATGAATCTCGTGGATCCGACCCGTGTAA
JMSF015L04+           TTAGCTCCAACTCCATCTTTGCCTCTGACCTCATGAATCTCGTGGATCCGACCCGTGTAA
                      ____________________________________________________________
consensus             TTAGCTCCAACTCCATCTTTGCCTCTGACCTCATGAATCTCGTGGATCCGACCCGTGTAA
 
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JMFS034G12+           TAAAGTATCCGCTCCGTCAACGTGGTCTTCCCGGAGTCAATATGTGCCGAAATACCAATG
JMSF023F22+           TAAAGTATCCGCTCCGTCAACGTGGTCTTCCCGGAGTCAATATGTGCCGAAATACCAATG
JMSF034P23+           TAAAGTATCCGCTCCGTCAACGTGGTCTTCCCGGAGTCAATATGTGCCGAAATACCAATG
JMSF015L04+           TAAAGTATCCGCTCCGTCAACGTGGTCTTCCCGGAGTCAATATGTGCCGAAATACCAATG
                      ____________________________________________________________
consensus             TAAAGTATCCGCTCCGTCAACGTGGTCTTCCCGGAGTCAATATGTGCCGAAATACCAATG
 
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JMFS034G12+           TTCCGAACCCTCTCCAGTGACTCTCTCCACACAGCCTCCTTCTCCTCCTTCAGTCGGGTG
JMSF023F22+           TTCCGAACCCTCTCCAGTGACTCTCTCCACACAGCCTCCTTCTCCTCCTTCAGTCGGGTG
JMSF034P23+           TTCCGAACCCTCTCCAGTGACTCTCTCCACACAGCCTCCTTCTCCTCCTTCAGTCGGGTG
JMSF015L04+           TTCCGAACCCTCTCCAGTGACTCTCTCCACACAGCCTCCTTCTCCTCCTTCAGTCGGGTG
                      ____________________________________________________________
consensus             TTCCGAACCCTCTCCAGTGACTCTCTCCACACAGCCTCCTTCTCCTCCTTCAGTCGGGTG
 
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JMFS034G12+           GCGGCAGCACTGCCAGCAGAGAAGTGGCGGAGCTGGAAGTTCCCGGCAAGAAGAGCCGCA
JMSF023F22+           GCGGCAGCACTGCCAGCAGAGAAGTGGCGGAGCTGGAAGTTCCCGGCAAGAAGAGCCGCA
JMSF034P23+           GCGGCAGCACTGCCAGCAGAGAAGTGGCGGAGCTGGAAGTTCCCGGCAAGAAGAGCCGCA
JMSF015L04+           GCGGCAGCACTGCCAGCAGAGAAGTGGCGGAGCTGGAAGTTCCCGGCAAGAAGAGCCGCA
                      ____________________________________________________________
consensus             GCGGCAGCACTGCCAGCAGAGAAGTGGCGGAGCTGGAAGTTCCCGGCAAGAAGAGCCGCA
 
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JMFS034G12+           ATAGGAGTTGGGGCCGGGCATTGAGGCTTCAACAGAGCTGCTTTTGAGGAGGAGCAGATT
JMSF023F22+           ATAGGAGTTGGGGCCGGGCATTGAGGCTTCAACAGAGCTGCTTTTGAGGAGGAGCAGATT
JMSF034P23+           ATAGGAGTTGGGGCCGGGCATTGAGGCTTCAACAGAGCTGCTTTTGAGGAGGAGCAGATT
JMSF015L04+           ATAGGAGTTGGGGCCGGGCATTGAGGCTTCAACAGAGCTGCTTTTGAGGAGGAGCAGATT
                      ____________________________________________________________
consensus             ATAGGAGTTGGGGCCGGGCATTGAGGCTTCAACAGAGCTGCTTTTGAGGAGGAGCAGATT
 
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JMFS034G12+           GTGTAGAGCAGCCGTGTAGCAGAGGAGCGAGTGGACTGCGCCATTGTTGGGGTTTAGGGT
JMSF023F22+           GTGTAGAGCAGCCGTGTAGCAGAGGAGCGAGTGGACTGCGCCATTGTTGGGGTTTAGGGT
JMSF034P23+           GTGTAGAGCAGCCGTGTAGCAGAGGAGCGAGTGGACTGCGCCATTGTTGGGGTTTAGGGT
JMSF015L04+           GTGTAGAGCAGCCGTGTAGCAGAGGAGCGAGTGGACTGCGCCATTGTTGGGGTTTAGGGT
                      ____________________________________________________________
consensus             GTGTAGAGCAGCCGTGTAGCAGAGGAGCGAGTGGACTGCGCCATTGTTGGGGTTTAGGGT
 
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JMFS034G12+           TTTTGGTAAA                                                  
JMSF023F22+           TTTTGGTAAAACCCCTGTGATTCCGCGGAAAATCTCCACTC                   
JMSF034P23+           TTTTGGTAAAACCCCTGTGATTCCGCGGAAAATCTCCACTCTGCGGGAAGCAGAAATG  
JMSF015L04+           TTTTGGTAAAACCCCTGTGATTCCGCGGAAAATCTCCACTCTGCGGGAAGCAGAAATGTC
                      ____________________________________________________________
consensus             TTTTGGTAAAACCCCTGTGATTCCGCGGAAAATCTCCACTCTGCGGGAAGCAGAAATGTC