clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF002H20 | Sequence | 530 | 000669 (7) | ref|XP_009804525.1| | 4e-65 | PREDICTED: serine/threonine-protein phosphatase PP2A catalytic subunit isoform | 732 | 016911 | ref|XP_011039507.1| | 1e-70 | PREDICTED: serine/threonine-protein phosphatase PP2A catalytic subunit-like iso |
JMSF001A06 | Sequence | 281 | 000669 (7) | ref|XP_009804525.1| | 3e-32 | PREDICTED: serine/threonine-protein phosphatase PP2A catalytic subunit isoform | 744 | 011408 (5) | gb|ACU17345.1| | 7e-31 | unknown [Glycine max] |
JMSF002K12 | Sequence | 313 | 000669 (7) | ref|XP_009804525.1| | 3e-13 | PREDICTED: serine/threonine-protein phosphatase PP2A catalytic subunit isoform | 745 | 000714 (77) | ref|XP_011085268.1| | 2e-161 | PREDICTED: chlorophyll a-b binding protein 21, chloroplastic-like [Sesamum indi |
JMSF004C20 | Sequence | 406 | 000669 (7) | ref|XP_009804525.1| | 1e-62 | PREDICTED: serine/threonine-protein phosphatase PP2A catalytic subunit isoform | |||||
JMSF013G14 | Sequence | 537 | 000669 (7) | ref|XP_009804525.1| | 1e-51 | PREDICTED: serine/threonine-protein phosphatase PP2A catalytic subunit isoform | 738 | 011408 (5) | gb|ACU17345.1| | 2e-27 | unknown [Glycine max] |
JMSF026N12 | Sequence | 684 | 000669 (7) | ref|XP_009804525.1| | 4e-91 | PREDICTED: serine/threonine-protein phosphatase PP2A catalytic subunit isoform | 759 | 011408 (5) | gb|ACU17345.1| | 4e-29 | unknown [Glycine max] |
JMSF043O02 | Sequence | 747 | 000669 (7) | ref|XP_009804525.1| | 2e-112 | PREDICTED: serine/threonine-protein phosphatase PP2A catalytic subunit isoform | 801 | 011408 (5) | ref|XP_010243441.1| | 3e-42 | PREDICTED: serine/threonine-protein phosphatase PP2A-4 catalytic subunit-like [ |
This contig is upended
. : . : . : . : . : . :
JMSF043O02+ TTCAACCAAAGCAGTAAGTGGGAAATAGTCGAACAGATCAGTGAAA
____________________________________________________________
consensus TTCAACCAAAGCAGTAAGTGGGAAATAGTCGAACAGATCAGTGAAA
. : . : . : . : . : . :
JMSF043O02+ GTCTTCCACACATTAGCATTTCCATATTTCCTCAAGCATTCATCATAAAACCCATAAACT
JMSF026N12+ AAGCATTCATCATAAAACCCATAAACT
____________________________________________________________
consensus GTCTTCCACACATTAGCATTTCCATATTTCCTCAAGCATTCATCATAAAACCCATAAACT
. : . : . : . : . : . :
JMSF043O02+ TGAGTAATCTGTCGACTTTCATGATTTCCTCTCAAGATTGTAATTCGTTGAGGATAGCGA
JMSF026N12+ TGAGTAATCTGTCGACTTTCATGATTTCCTCTCAAGATTGTAATTCGTTGAGGATAGCGA
____________________________________________________________
consensus TGAGTAATCTGTCGACTTTCATGATTTCCTCTCAAGATTGTAATTCGTTGAGGATAGCGA
. : . : . : . : . : . :
JMSF004C20+ TCAACAGAATAGTATCCACGATCTACATAA
JMFF002H20+ TCAACAGAGTAGTATCCACGATCCACATAA
JMSF043O02+ ACTTTGAGAGACACCAAAAGCGTTACTGTTTCAACAGAATAGTATCCACGATCTACATAA
JMSF026N12+ ACTTTGAGAGACACCAAAAGCGTTACTGTTTCAACAGAATAGTATCCACGATCTACATAA
____________________________________________________________
consensus ACTTTGAGAGACACCAAAAGCGTTACTGTTTCAACAGAATAGTATCCACGATCTACATAA
. : . : . : . : . : . :
JMSF004C20+ TCTCCCATGAACAAATAATTGGTATCTGGACACTTTCCACCAATTCGGAAGAGCTCAGCA
JMFF002H20+ TCTCCCATGAACAAATAATTGGTATCTGGGCACTTCCCACCGATCCGGAAAAGCTCAGCA
JMSF043O02+ TCTCCCATGAACAAATAATTGGTATCTGGACACTTTCCACCAATTCGGAAGAGCTCAGCA
JMSF026N12+ TCTCCCATGAACAAATAATTGGTATCTGGACACTTTCCACCAATTCGGAAGAGCTCAGCA
JMSF013G14+ CCCATGAACAAATAATTGGTATCTGGACACTTTCCACCAATTCGGAAGAGCTCAGCA
____________________________________________________________
consensus TCTCCCATGAACAAATAATTGGTATCTGGACACTTTCCACCAATTCGGAAGAGCTCAGCA
. : . : . : . : . : . :
JMSF004C20+ AGATCATGAAACTGCCCATGAATATCACCACATATGGTCACAGGGCTTTTCACAGGCTGT
JMSF001A06+ ATGAATATCACCACATATGGTCACAGGGCTTTTCACAGGCTGT
JMFF002H20+ AGATCATGGAACTGCCCATGAATATCGCCACATATAGTCACAGGGCTTTTCACAGGCTGT
JMSF043O02+ AGATCATGAAACTGCCCATGAATATCACCACATATGGTCACAGGGCTTTTCACAGGCTGT
JMSF026N12+ AGATCATGAAACTGCCCATGAATATCACCACATATGGTCACAGGGCTTTTCACAGGCTGT
JMSF013G14+ AGATCATGAAACTGCCCATGAATATCACCACATATGGTCACAGGGCTTTTCACAGGCTGT
____________________________________________________________
consensus AGATCATGAAACTGCCCATGAATATCACCACATATGGTCACAGGGCTTTTCACAGGCTGT
. : . : . : . : . : . :
JMSF004C20+ ACATTGCTCTCGTTCATCAGAACTTCCTTAGCTTTCTCACATAGCACTCGCACCTCTTGT
JMSF002K12+ CTCACATAGCACTCGCACCTCTTGT
JMSF001A06+ ACATTGCTCTCGTTCATCAGAACTTCCTTAGCTTTCTCACATAGCACTCGCACCTCTTGT
JMFF002H20+ ACATTGCTCTCATCCATCAGAATCTCTTTCGCTTTCTCACAAAGCACCCTCACCTCTTGC
JMSF043O02+ ACATTGCTCTCGTTCATCAGAACTTCCTTAGCTTTCTCACATAGCACTCGCACCTCTTGT
JMSF026N12+ ACATTGCTCTCGTTCATCAGAACTTCCTTAGCTTTCTCACATAGCACTCGCACCTCTTGT
JMSF013G14+ ACATTGCTCTCGTTCATCAGAACTTCCTTAGCTTTCTCACATAGCACTCGCACCTCTTGT
____________________________________________________________
consensus ACATTGCTCTCGTTCATCAGAACTTCCTTAGCTTTCTCACATAGCACTCGCACCTCTTGT
. : . : . : . : . : . :
JMSF004C20+ TCGGACAAGGGCTTGCACTGCATGAGCTGAGCTATATTTTCATCGAGGTTTCCATGAGCA
JMSF002K12+ TCGGACAAGGGCTTGCACTGCATGAGCTGAGCTATATTTTCATCGAGGTTTCCATGAGCA
JMSF001A06+ TCGGACAAGGGCTTGCACTGCATGAGCTGAGCTATATTTTCATCGAGGTTTCCATGAGCA
JMFF002H20+ TCTGACAAGGGTTTGCACTGCATGAGCTGAGCAATCTGCTCATCGAGATTCCCGTGAGCA
JMSF043O02+ TCGGACAAGGGCTTGCACTGCATGAGCTGAGCTATATTTTCATCGAGGTTTCCATGAGCA
JMSF026N12+ TCGGACAAGGGCTTGCACTGCATGAGCTGAGCTATATTTTCATCGAGGTTTCCATGAGCA
JMSF013G14+ TCGGACAAGGGCTTGCACTGCATGAGCTGAGCTATATTTTCATCGAGGTTTCCATGAGCA
____________________________________________________________
consensus TCGGACAAGGGCTTGCACTGCATGAGCTGAGCTATATTTTCATCGAGGTTTCCATGAGCA
. : . : . : . : . : . :
JMSF004C20+ GCGCTCGACGGCACTGGATCCATGCTGCTCCGTGTTCTCCTGGTACGGCGTCGTTCCTTC
JMSF002K12+ GCGCTCGACGGCACTGGATCCATGCTGCTCCGTGTTCTCCTGGTACGGCGTCGTTCCTTC
JMSF001A06+ GCGCTCGACGGCACTGGATCCATGCTGCTCCGTGTTCTCCTGGTACGGCGTCGTTCCTTC
JMFF002H20+ GCGCTCGACGGCACCGAATCCATGCTGCTC
JMSF043O02+ GCGCTCGACGGCACTGGATCCATGCTGCTCCGTGTTCTCCTGGTACGGCGTCGTTCCTTC
JMSF026N12+ GCGCTCGACGGCACTGGATCCATGCTGCTCCGTGTTCTCCTGGTACGGCGTCGTTCCTTC
JMSF013G14+ GCGCTCGACGGCACTGGATCCATGCTGCTCCGTGTTCTCCTGGTANGGCGTCGTTCCTTC
____________________________________________________________
consensus GCGCTCGACGGCACTGGATCCATGCTGCTCCGTGTTCTCCTGGTACGGCGTCGTTCCTTC
. : . : . : . : . : . :
JMSF004C20+ TCTTTTTTATTCGGACAGAGTGCCCTCGGAAGAAGAAAGAAGAAACCCTAGATTGT
JMSF002K12+ TCTTTTTTATTCGGACAGAGTGCCCTCGGAAGAAGAAAGAAGAAACCCTAGATTGTTGGG
JMSF001A06+ TCTTTTTTATTCGGACAGAGTGCCCTCGGAAGAAGAAAGAAGAAACCCTAGATTGTT
JMSF043O02+ TCTTTTTTATTCGGACAGAGTGCCCTCGGAAGAAGAAAGAAGAAACCCTAGATTGTTGGG
JMSF026N12+ TCTTTTTTATTCGGACAGAGTGCCCTCGGAAGAAGAAAGAAGAAACCCTAGATTGTTGGG
JMSF013G14+ TCTTTTTTATTCGGACAGAGTGCCCTCGGAAGAAGAAAGAAGAAACCCTAGATTGTTGGG
____________________________________________________________
consensus TCTTTTTTATTCGGACAGAGTGCCCTCGGAAGAAGAAAGAAGAAACCCTAGATTGTTGGG
. : . : . : . : . : . :
JMSF002K12+ GAGGGAGGGGGGGTGGCGGGGTTCGATTTGAGATTTGATTATTTTCTCACGCTCTCGTTC
JMSF043O02+ GAGGGAGGGGGGGTGGCGGGGTTCGATTTGAGATTTGATTATTTTCTCACGCTCTCGTTC
JMSF026N12+ GAGGGAGGGGGGGTGGCGGGGTTCGATTTGAGATTTGATTATTTTCTCACGCTCTCGTTC
JMSF013G14+ GAGGGAGGGGGGGTGGCGGGGTTCGATTTGAGATTTGATTATTTTCTCACGCTCTCGTTC
____________________________________________________________
consensus GAGGGAGGGGGGGTGGCGGGGTTCGATTTGAGATTTGATTATTTTCTCACGCTCTCGTTC
. : . : . : . : . : . :
JMSF002K12+ TCGTTCCTGAGTATGCGACGTCGTTTGTTCCTCCGGTCTACAGGG
JMSF043O02+ TCGTTCCTGAGTATGCGACGTCGTTTGTTCCTCCGGTCTACAGGGACGAATGAGGAGAGA
JMSF026N12+ TCGTTCCTGAGTATGCGACGTCGTTTGTTCCTCCGGTCTACAGGGACGAATGAGGAGAGA
JMSF013G14+ TCGTTCCTGAGTATGCGACGTCGTTTGTTCCTCCGGTCTACAGGGACGAATGAGGAGAGA
____________________________________________________________
consensus TCGTTCCTGAGTATGCGACGTCGTTTGTTCCTCCGGTCTACAGGGACGAATGAGGAGAGA
. : . : . : . : . : . :
JMSF043O02+ GAAACTGCACGGACATTAATGGCGATGGACTGATGGAGA
JMSF026N12+ GAAACTGCACGGACATTAATGGCGATGGACTGATGGAGATGGAGAACAACAAATCC
JMSF013G14+ GAAACTGCACGGACATTAATGGCGATGGACTGATGGAGATGGAGAACAACAAATCCACTC
____________________________________________________________
consensus GAAACTGCACGGACATTAATGGCGATGGACTGATGGAGATGGAGAACAACAAATCCACTC