Contig 000606:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF044M05+                                               TTCCCTTTCTCTCACAACGTTATC
                      ____________________________________________________________
consensus                                                 TTCCCTTTCTCTCACAACGTTATC
 
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JMSF044M05+           TCTAAATTCTTCAACTGTCCAATTATTCCCTTCATCACTGTCAAAATCTCCCTCAAGAAC
                      ____________________________________________________________
consensus             TCTAAATTCTTCAACTGTCCAATTATTCCCTTCATCACTGTCAAAATCTCCCTCAAGAAC
 
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JMSF044M05+           TACAATTTCCACCTTTGCAGATGATTCTGGGCCAGTTGTCACAACTTGTCCGGTAAGAGC
                      ____________________________________________________________
consensus             TACAATTTCCACCTTTGCAGATGATTCTGGGCCAGTTGTCACAACTTGTCCGGTAAGAGC
 
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JMSF044M05+           ATCAACCAAAGCGACTCTAAGACTTGAGCCATCCTCTCCTTCTATACGAGTTCCAGTAAA
                      ____________________________________________________________
consensus             ATCAACCAAAGCGACTCTAAGACTTGAGCCATCCTCTCCTTCTATACGAGTTCCAGTAAA
 
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JMSF044M05+           TACAGGAGGAGATATAGAATCTAAAAATTTTAACTTGAGGCTTCTTAATTCATAAGGGTG
                      ____________________________________________________________
consensus             TACAGGAGGAGATATAGAATCTAAAAATTTTAACTTGAGGCTTCTTAATTCATAAGGGTG
 
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JMFF024E01+                           TTCCGTTTCAAACTGGTCACGTACTTTCTCAATGCTATGTCAAC
JMSF044M05+           TGCATCTTTCCCACCATTCCGTTTCAAACTGGTCACGTACTTTCTCAATGCTATGTCAAC
                      ____________________________________________________________
consensus             TGCATCTTTCCCACCATTCCGTTTCAAACTGGTCACGTACTTTCTCAATGCTATGTCAAC
 
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JMFF024E01+           TTCCTCTTTTACAACTCTACGTATCAAAGGCTCCAAAACGGGCTCCATAAAAGTCTGCAT
JMSF044M05+           TTCCTCTTTTACAACTCTACGTATCAAAGGCTCCAAAACGGGCTCCATAAAAGTCTGCAT
                      ____________________________________________________________
consensus             TTCCTCTTTTACAACTCTACGTATCAAAGGCTCCAAAACGGGCTCCATAAAAGTCTGCAT
 
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JMFF024E01+           TTTTCGCATATTCATAACCTCCAACACCACACTTTTGAGGGAAGGAATCTTCCGGCGGCG
JMSF044M05+           TTTTCGCATATTCATAACCTCCAACACCACACTTTTGAGGGAAGGAATCTTCCGGCGGCG
                      ____________________________________________________________
consensus             TTTTCGCATATTCATAACCTCCAACACCACACTTTTGAGGGAAGGAATCTTCCGGCGGCG
 
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JMFF024E01+           TTTATCGTCGGAAAGTCCGCCGTCGGGTAGAGACTTGTAATCCTCCTCGGGCTGCCGCTT
JMSF044M05+           TTTATCGTCGGAAAGTCCGCCGTCGGGTAGAGACTTGTAATCCTCCTCGGGCTGCCGCTT
JMSF006N09+                                                        CTCGGGCTGCCGCTT
                      ____________________________________________________________
consensus             TTTATCGTCGGAAAGTCCGCCGTCGGGTAGAGACTTGTAATCCTCCTCGGGCTGCCGCTT
 
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JMFF024E01+           CTGTGACATTTCCGATGACGGTCTGAAACTCCACAAGATACGGCGGCGTTAATGCTGATA
JMSF044M05+           CTGTGACATTTCCGATGACGGTCTGAAACTCCACAAGATGCGGCGGCGTTAATGCTGATA
JMSF006N09+           CTGTGACATTTCCGATGACGGTCTGAAACTCCACAAGATACGGCGGCGTTAATGCTGATA
                      ____________________________________________________________
consensus             CTGTGACATTTCCGATGACGGTCTGAAACTCCACAAGATACGGCGGCGTTAATGCTGATA
 
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JMFF024E01+           ACATTAAAAGTAATCCAATCAATCAGCAGGCGGAGCAAGCTAAGCACAGAGAGTGATGAT
JMSF044M05+           ACATTAAAAGTAATCCAATCAATCAGCAGGCGGAGCAAGCTAAGCACAGAGAGTGATGAT
JMSF006N09+           ACATTAAAAGTAATCCAATCAATCAGCAGGCGGAGCAAGCTAAGCACAGAGAGTGATGAT
                      ____________________________________________________________
consensus             ACATTAAAAGTAATCCAATCAATCAGCAGGCGGAGCAAGCTAAGCACAGAGAGTGATGAT
 
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JMFF024E01+           GGAGATGGAGGAGAAAATCTGATTGTCCCAGAGGAGACAAGAAGACCAACATGCGTTAGG
JMSF044M05+           GGAGATGGAGGAGAAAATCTGATTGTCCCAGAGGAGACAAGAAGACCAACATGCGTTAGG
JMSF006N09+           GGAGATGGAGGAGAAAATCTGATTGTCCCAGAGGAGACAAGAAGACCAACATGCGTTAGG
                      ____________________________________________________________
consensus             GGAGATGGAGGAGAAAATCTGATTGTCCCAGAGGAGACAAGAAGACCAACATGCGTTAGG
 
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JMFF024E01+           CGATGATGATGAAGCAGAAGATCAGAAGAAGATACGAATAAATAAAATAATACACT    
JMSF044M05+           CGATGATGATGAAGCAGAAGATCAGAAGAAGATACGAATAAATAAAATAATACACT    
JMSF006N09+           CGATGATGATGAAGCAGAAGATCAGAAGAAGATACGAATAAATAAAATAATACACTAATC
                      ____________________________________________________________
consensus             CGATGATGATGAAGCAGAAGATCAGAAGAAGATACGAATAAATAAAATAATACACTAATC