| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF006L01 | Sequence | 426 | 000604 (4) | ref|XP_004230025.1| | 78.6 | PREDICTED: uncharacterized protein LOC101265170 [Solanum lycopersicum] | 496 | 008666 (5) | ref|XP_004230025.1| | 183 | PREDICTED: uncharacterized protein LOC101265170 [Solanum lycopersicum] |
| JMSF028D16 | Sequence | 601 | 000604 (4) | gb|EYU38284.1| | 2e-49 | hypothetical protein MIMGU_mgv1a014947mg [Erythranthe guttata] | 770 | 008666 (5) | ref|XP_009802888.1| | 3e-102 | PREDICTED: uncharacterized protein LOC104248339 isoform X4 [Nicotiana sylvestri |
| JMSF028G15 | Sequence | 649 | 000604 (4) | gb|EYU38284.1| | 1e-57 | hypothetical protein MIMGU_mgv1a014947mg [Erythranthe guttata] | 747 | 008666 (5) | ref|XP_009802888.1| | 5e-96 | PREDICTED: uncharacterized protein LOC104248339 isoform X4 [Nicotiana sylvestri |
| JMSF049A04 | Sequence | 661 | 000604 (4) | emb|CDP18664.1| | 3e-58 | unnamed protein product [Coffea canephora] | 744 | 008666 (5) | ref|XP_009802888.1| | 3e-95 | PREDICTED: uncharacterized protein LOC104248339 isoform X4 [Nicotiana sylvestri |
This contig is upended
. : . : . : . : . : . :
JMSF049A04+ AT
____________________________________________________________
consensus AT
. : . : . : . : . : . :
JMSF028G15+ CTCCGAAAACCTTTATCAATATACAGGTATCTGTCTAAACATTTAAGAAATT
JMSF028D16+ AATT
JMSF049A04+ TGCTCATCCTCCGAAAACCTTTATCAATATACAGGTATCTGTCTAAACATTTAAGAAATT
____________________________________________________________
consensus TGCTCATCCTCCGAAAACCTTTATCAATATACAGGTATCTGTCTAAACATTTAAGAAATT
. : . : . : . : . : . :
JMSF028G15+ CTTCCGGTGATGACCTGAAGGACGAGCCATAGTGGGAACAATAGTCCATAGAAAGGTCAT
JMSF028D16+ CTTCCGGTGATGACCTGAAGGACGAGCCATAGTGGGAACAATAGTCCATAGAAAGGTCAT
JMSF049A04+ CTTCCGGTGATGACCTGAAGGACGAGCCATAGTGGGAACAATAGTCCATAGAAAGGTCAT
____________________________________________________________
consensus CTTCCGGTGATGACCTGAAGGACGAGCCATAGTGGGAACAATAGTCCATAGAAAGGTCAT
. : . : . : . : . : . :
JMSF028G15+ CCAATCTCGCCAAGAAATCATCCACTGGAAGTGGAACAGAAGAGTGTGAAATCAGCGAGT
JMSF028D16+ CCAATCTCGCCAAGAAATCATCCACTGGAAGTGGAACAGAAGAGTGTGAAATCAGCGAGT
JMSF049A04+ CCAATCTCGCCAAGAAATCATCCACTGGAAGTGGAACAGAAGAGTGTGAAATCAGCGAGT
____________________________________________________________
consensus CCAATCTCGCCAAGAAATCATCCACTGGAAGTGGAACAGAAGAGTGTGAAATCAGCGAGT
. : . : . : . : . : . :
JMSF028G15+ CATCCTCAGCTGCTATATACAGAGCTGCTTTCCCCAAATCAACCCTCCTGTTTATGCTAA
JMSF028D16+ CATCCTCAGCTGCTATATACAGAGCTGCTTTCCCCAAATCAACCCTCCTGTTTATGCTAA
JMSF049A04+ CATCCTCAGCTGCTATATACAGAGCTGCTTTCCCCAAATCAACCCTCCTGTTTATGCTAA
____________________________________________________________
consensus CATCCTCAGCTGCTATATACAGAGCTGCTTTCCCCAAATCAACCCTCCTGTTTATGCTAA
. : . : . : . : . : . :
JMSF028G15+ TGCTCGTTTCTCTCTCAATTTCTGATAGTTTTTGTATCTGTGAGTAGAACCCTTCCCTTG
JMSF028D16+ TGCTCGTTTCTCTCTCAATTTCTGATAGTTTTTGTATCTGTGAGTAGAACCCTTCCCTTG
JMSF049A04+ TGCTCGTTTCTCTCTCAATTTCTGATAGTTTTTGTATCTGTGAGTAGAACCCTTCCCTTG
JMSF006L01+ TTCTCTCTCAATTTCTGATAGTTTTTGTATCTGTGAGTAGAACCCTTCCCTTG
____________________________________________________________
consensus TGCTCGTTTCTCTCTCAATTTCTGATAGTTTTTGTATCTGTGAGTAGAACCCTTCCCTTG
. : . : . : . : . : . :
JMSF028G15+ CCATACGGGCGTGGGCGGTGTCGATGCCGGAATGATCGAGGGAATCATGGAGCAGAAATT
JMSF028D16+ CCATACGGGCGTGGGCGGTGTCGATGCCGGAATGATCGAGGGAATCATGGAGCAGAAATT
JMSF049A04+ CCATACGGGCGTGGGCGGTGTCGATGCCGGAATGATCGAGGGAATCATGGAGCAGAAATT
JMSF006L01+ CCATACGGGCGTGGGCGGTGTCGATGCCGGAATGATCGAGGGAATCATGGAGCAGAAATT
____________________________________________________________
consensus CCATACGGGCGTGGGCGGTGTCGATGCCGGAATGATCGAGGGAATCATGGAGCAGAAATT
. : . : . : . : . : . :
JMSF028G15+ TGAGATCTTCATTGGATTCGGCCTGAGATTTACAGCAGGAAAAGACGGCGAAACCACCAC
JMSF028D16+ TGAGATCTTCATTGGATTCGGCCTGAGATTTACAGCAGGAAAAGACGGCGAAACCACCAC
JMSF049A04+ TGAGATCTTCATTGGATTCGGCCTGAGATTTACAGCAGGAAAAGACGGCGAAACCACCAC
JMSF006L01+ TGAGATCTTCATTGGATTCGGCCTGAGATTTACAGCAGGAAAAGACGGCGAAACCACCAC
____________________________________________________________
consensus TGAGATCTTCATTGGATTCGGCCTGAGATTTACAGCAGGAAAAGACGGCGAAACCACCAC
. : . : . : . : . : . :
JMSF028G15+ CGCCTCCGCCGCCGCCGCCGACTCCGGCATCAATTTCCTTGGGCGAGAGATGATGAATTC
JMSF028D16+ CGCCTCCGCCGCCGCCGCCGACTCCGGCATCAATTTCCTTGGGCGAGAGATGATGAATTC
JMSF049A04+ CGCCTCCGCCGCCGCCGCCGACTCCGGCATCAATTTCCTTGGGCGAGAGATGATGAATTC
JMSF006L01+ CGCCTCCGCCGCCGCCGCCGACTCCGGCATCAATTTCCTTGGGCGAGAGATGATGAATTC
____________________________________________________________
consensus CGCCTCCGCCGCCGCCGCCGACTCCGGCATCAATTTCCTTGGGCGAGAGATGATGAATTC
. : . : . : . : . : . :
JMSF028G15+ TGGAAGGGAATTTGGACAAGGATCGAACGGAAGAAGCGTAGGCTCCCGAAATCCATGGAC
JMSF028D16+ TGGAAGGGAATTTGGACAAGGATCGAACGGAAGAAGCGTAGGCTCCCGAAATCCATGGAC
JMSF049A04+ TGGAAGGGAATTTGGACAAGGATCGAACGGAAGAAGCGTAGGCTCCCGAAATCCATGGAC
JMSF006L01+ TGGAAGGGAATTTGGACAAGGATCGAACGGAAGAAGCGTAGGCTCCCGAAATCCATGGAC
____________________________________________________________
consensus TGGAAGGGAATTTGGACAAGGATCGAACGGAAGAAGCGTAGGCTCCCGAAATCCATGGAC
. : . : . : . : . : . :
JMSF028G15+ AACTCAATCCACTCATCTCTCACTTTCTTCTCCTCCTCCTTCCTGGAAGCTCAAACACGC
JMSF028D16+ AACTCAATCCACTCATCTCTCACTTTCTTCTCCTCCTCCTTCCTGGAAGCTCAAACACGC
JMSF049A04+ AACTCAATCCACTCATCTCTCACTTTCTTCTCCTCCTCCTTCCTGGAAGCTCAAACACGC
JMSF006L01+ AACTCAATCCACTCATCTCTCACTTTCTTCTCCTCCTCCTTCCTGGAAGCTCAAACACGC
____________________________________________________________
consensus AACTCAATCCACTCATCTCTCACTTTCTTCTCCTCCTCCTTCCTGGAAGCTCAAACACGC
. : . : . : . : . : . :
JMSF028G15+ AGAAATGGCAGTCCTAATCCGATCGCTTTACCTCTTAGCTCGAAAAGGAAAAGA
JMSF028D16+ AGAAATGGCAGTCCTAATCCGATCGCTTTACCTCTTAGCTCGAAAAGGAAAAGA
JMSF049A04+ AGAAATGGCAGTCCTAATCCGATCGCTTTACCTCTTAGCTCGAAAAGGAAAAGA
JMSF006L01+ AGAAATGGCAGTCCTAATCCGATCGCTTTACCTCTTAGCTCGAAAAGGAAAAGATCTTCC
____________________________________________________________
consensus AGAAATGGCAGTCCTAATCCGATCGCTTTACCTCTTAGCTCGAAAAGGAAAAGATCTTCC