| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF004C24 | Sequence | 617 | 000598 (9) | ref|XP_011102070.1| | 9e-64 | PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein | 733 | 002506 (4) | ref|XP_006358077.1| | 8e-97 | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g07650 |
| JMFS165G07 | Sequence | 628 | 000598 (9) | ref|XP_011102070.1| | 3e-87 | PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein | |||||
| JMSF003G05 | Sequence | 380 | 000598 (9) | ref|XP_009600348.1| | 4e-37 | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g07650 | 749 | 024447 | ref|XP_008349229.1| | 2e-80 | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g07650 |
| JMSF006D14 | Sequence | 358 | 000598 (9) | ref|XP_006358076.1| | 3e-38 | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g07650 | |||||
| JMSF006F04 | Sequence | 410 | 000598 (9) | ref|XP_009600348.1| | 6e-43 | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g07650 | 281 | 002506 (4) | ref|XP_008349229.1| | 1e-23 | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g07650 |
| JMSF019I17 | Sequence | 497 | 000598 (9) | ref|XP_009600348.1| | 6e-36 | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g07650 | 776 | 012591 (2) | emb|CBI30743.3| | 1e-121 | unnamed protein product [Vitis vinifera] |
| JMSF023E11 | Sequence | 671 | 000598 (9) | ref|XP_011102070.1| | 9e-89 | PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein | 745 | 005812 (8) | ref|XP_007025271.1| | 3e-105 | Leucine-rich repeat transmembrane protein kinase [Theobroma cacao] gb|EOY27893.1 |
| JMSF041F08 | Sequence | 761 | 000598 (9) | ref|XP_011102070.1| | 7e-106 | PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein | 708 | 012516 (3) | emb|CDO96888.1| | 1e-71 | unnamed protein product [Coffea canephora] |
| JMSF042J02 | Sequence | 675 | 000598 (9) | ref|XP_011102070.1| | 1e-92 | PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein | 774 | 012516 (3) | emb|CBI30743.3| | 2e-93 | unnamed protein product [Vitis vinifera] |
This contig is upended
. : . : . : . : . : . :
JMSF041F08+ CCACTTGCTTGAACCTCTAGTTGTTGAAGGTCTTTAAAACCTTG
____________________________________________________________
consensus CCACTTGCTTGAACCTCTAGTTGTTGAAGGTCTTTAAAACCTTG
. : . : . : . : . : . :
JMSF041F08+ AAAGCTAGGCATTTTCCCAGTGAAGTTATTCCTGCTGAGCCTAAGCTCTGTCAATTTGGT
JMSF042J02+ GT
____________________________________________________________
consensus AAAGCTAGGCATTTTCCCAGTGAAGTTATTCCTGCTGAGCCTAAGCTCTGTCAATTTGGT
. : . : . : . : . : . :
JMSF041F08+ GAGAGCATTAAGTTCTTTTGGCAATTCACCTGTGAGATCATTATCACCGACGATGAGATT
JMFS165G07+ TTTGGCAATTCACCTGTGAGATCATTATCACCGACGATGAGATT
JMSF042J02+ GAGAGCATTAAGTTCTTTTGGCAATTCACCTGTGAGATCATTATCACCGACGATGAGATT
____________________________________________________________
consensus GAGAGCATTAAGTTCTTTTGGCAATTCACCTGTGAGATCATTATCACCGACGATGAGATT
. : . : . : . : . : . :
JMSF041F08+ CTGTAGGTTCGCGAGTTTCCCAAGCTCAGGAGGAACAGTTCCATTGAACAAGTTGTTCTC
JMFF004C24+ TCTGGTGGAATAGTGCCATTAAACAAATTGTTCTC
JMFS165G07+ CTGTAGGTTCGCGAGTTTCCCAAGCTCAGGAGGAACAGTTCCATTGAACAAGTTGTTCTC
JMSF023E11+ TAGGTTGGCAAGTTTCCCCAGCTCAGGTGGAACAGTTCCATTGAAGAAATTGCTCTC
JMSF042J02+ CTGTAGGTTCGCGAGTTTCCCAAGCTCAGGAGGAACAGTTCCATTGAACAAGTTGTTCTC
____________________________________________________________
consensus CTGTAGGTTCGCGAGTTTCCCAAGCTCAGGAGGAACAGTTCCATTGAACAAGTTGTTCTC
. : . : . : . : . : . :
JMSF041F08+ CAAGTTCAAATATACAAGAGTTGTTATATTTCCCAAGTATTTCGGAATTGGCCCAGACAA
JMFF004C24+ CAAGTTTAAAAGTACAAGAGTTGTTATATTTCCCAAGTACTTTGGAATTGGCCCAGATAA
JMFS165G07+ CAAGTTCAAATATACAAGAGTTGTTATATTTCCCAAGTATTTCGGAATTGGCCCAGACAA
JMSF023E11+ CAAGTTTAAATATGTAAGAGTTGTTATATTTCCCAAGTATTTTGGAATTGGCCCGGACAA
JMSF042J02+ CAAGTTCAAATATACAAGAGTTGTTATATTTCCCAAGTATTTCGGAATTGGCCCAGACAA
____________________________________________________________
consensus CAAGTTCAAATATACAAGAGTTGTTATATTTCCCAAGTATTTCGGAATTGGCCCAGACAA
. : . : . : . : . : . :
JMSF041F08+ TCGATTCACAGTAAGAGATAGGTATTCCAATTTGGTAGAAGCCCATTCAGGGGGAATTGT
JMFF004C24+ CCGATTCACAGTAAGAGATATATATTCCAATTTCATAGAAGCCCATTCAAGGGGAATTGT
JMFS165G07+ TCGATTCACAGTAAGAGATAGGTATTCCAATTTGGTAGAAGCCCATTCAGGGGGAATTGT
JMSF023E11+ TCGATTCACAGTAACAGATATAAGTTCCAATTTGATAGAAGCCCATTCAGGGGGAATTGT
JMSF042J02+ TCGATTCACAGTAAGAGATAGGTATTCCAATTTGGTAGAAGCCCATTCAGGGGGAATTGT
____________________________________________________________
consensus TCGATTCACAGTAAGAGATAGGTATTCCAATTTGGTAGAAGCCCATTCAGGGGGAATTGT
. : . : . : . : . : . :
JMSF041F08+ ACCATTTAAGTAGTTGCGGTTGAGATCAATTATCTTAAGAAAGGGTAACTTCACCAAGGC
JMFF004C24+ ACCACTTAAGTAGTTGCGAGTGAGATCTATTATCTTAAGAAAGGGTAGCTTCACCAAAGC
JMSF003G05+ ATCTTAAGAAAGGGTAACTTCACCAAGGC
JMSF006F04+ CACTTAAGTAGNTGCGGGTGAGAACAATTATCTTGAGAAAGGGTAACTTCACCAAGGC
JMSF019I17+ ATTATCTTAAGAAAGGGTAGCTTCACTAACGC
JMFS165G07+ ACCATTTAAGTAGTTGCGGTTGAGATCAATTATCTTAAGAAAGGGTAACTTCACCAAGGC
JMSF023E11+ ACCACTTAAGTAGTTGCGAGAGAGATCAATTATCTTTAGAAAGGGTAACTTCACCAAGGC
JMSF042J02+ ACCATTTAAGTAGTTGCGGTTGAGATCAATTATCTTAAGAAAGGGTAACTTCACCAAGGC
JMSF006D14+ C
____________________________________________________________
consensus ACCATTTAAGTAGTTGCGGTTGAGATCAATTATCTTAAGAAAGGGTAACTTCACCAAGGC
. : . : . : . : . : . :
JMSF041F08+ AGGAGGAAGCACACCTTGCAGATCCTGTCCATTCAAAATTATGGTTTGAACATGGCAAAT
JMFF004C24+ AGGAGGAAGGACACCTTGCAGATCCTGTCCCTTCAAAACTATGCTTTGAACATGGCAAAT
JMSF003G05+ AGGAGGAAGGACACCTTGCAGATCCTGTCCCTTCAAGATTATGGTTTGAACATGGCAAAT
JMSF006F04+ AGGAGGAAGCACACCTTGCAGATCCTGTCCCTTCAAAATTATGCTTTGAACATGGCAAAT
JMSF019I17+ AGGAGGAAGAACACCTTGCAGATCCTGTCCCTTCAAAATTATGCTTTGAACATGGCAAAT
JMFS165G07+ AGGAGGAAGCACACCTTGCAGATCCTGTCCATTCAAAATTATGGTTTGAACATGGCAAAT
JMSF023E11+ AGGAGGAAGCACACCTTGCAGATCCTGTCCCTTCAAGTTTATGCTTCGAACATGGCAAAT
JMSF042J02+ AGGAGGAAGCACACCTTGCAGATCCTGTCCATTCAAAATTATGGTTTGAACATGGCAAAT
JMSF006D14+ AGGAGGAAGCACACCTTGCAGATCCTGTCCATTCAAAATTATGGTTTGAACATGGCAAAT
____________________________________________________________
consensus AGGAGGAAGCACACCTTGCAGATCCTGTCCCTTCAAAATTATGGTTTGAACATGGCAAAT
. : . : . : . : . : . :
JMSF041F08+ ACCAGCAGGGAAGCTACAATTGCAAGTGAGAGTGTTATTGTAGGCAGGCATATCTTTCCT
JMFF004C24+ ACCACCTGGGAAGTTACAGTTGCAAGTGAGGGTATTATTATAGGCAGGCATATCTTTCCT
JMSF003G05+ GCCACCGGGGAAGCTACAATCGCAAGTGAGAGTATTATTGTACTGAGGCGTATCATTCCT
JMSF006F04+ ACCACCGGGGAAGCTACAATTGCAAGTGAGAGTATTATTATACAGAAGCGTATCGTTCCT
JMSF019I17+ ACCACCAGGGAAGCTACAATTGCAAGTGAGAGTATTATTGTACGCAGGAATATCATTCCT
JMFS165G07+ ACCAGCAGGGAAGCTACAATTGCAAGTGAGAGTGTTATTGTAGGCAGGCATATCTTTCCT
JMSF023E11+ ACCAGCAGGGAAGCTGCAATTGCAAGTGAGAGTGTTATTGTACTCTGGCATACCTTCCTT
JMSF042J02+ ACCAGCAGGGAAGCTACAATTGCAAGTGAGAGTGTTATTGTAGGCAGGCATATCTTTCCT
JMSF006D14+ ACCAGCAGGGAAGCTACAATTGCAAGTGAGAGTGTTATTGTAGGCAGGCATATCTTTCCT
____________________________________________________________
consensus ACCAGCAGGGAAGCTACAATTGCAAGTGAGAGTGTTATTGTAGGCAGGCATATCTTTCCT
. : . : . : . : . : . :
JMSF041F08+ TTGTGGTGTCATCCAGTTCGAGTTGTTGTCGCAAGGATTTAGTTTAAAATCCCAATCCTT
JMFF004C24+ CTCTGGTGTAATCCAGTTGGAGTTGTTGTCACAAGGATTTAGTTTAAAATCCCAATCCTT
JMSF003G05+ TTTTGGTGACAACCAGTTAGAGTTGTTGTCACAAGGATTTAGTCTAAAATCCCAATCCTT
JMSF006F04+ TTGTGGTGTCAACCAATTTGAGTTGTTGTCACAAGGATTTAGTCTAAAATCCCAATCCTT
JMSF019I17+ TTGTGGTGTCATCCAGTTTGAGTTTTTGTCACAAGGATTTAGTTTAAAATCCCAATCCTT
JMFS165G07+ TTGTGGTGTCATCCAGTTCGAGTTGTTGTCGCAAGGATTTAGTTTAAAATCCCAATCCTT
JMSF023E11+ TTGTGGTGTCAACCAGTTTGAGTTGTTGTCACAAGGATTTAGTTTAAAATCCCAATCCTT
JMSF042J02+ TTGTGGTGTCATCCAGTTCGAGTTGTTGTCGCAAGGATTTAGTTTAAAATCCCAATCCTT
JMSF006D14+ TTGTGGTGTCATCCAGTTCGAGTTGTTGTCGCAAGGATTTAGTTTAAAATCCCAATCCTT
____________________________________________________________
consensus TTGTGGTGTCATCCAGTTCGAGTTGTTGTCACAAGGATTTAGTTTAAAATCCCAATCCTT
. : . : . : . : . : . :
JMSF041F08+ CTTCCCCAGTTGATCACCTATTTCCTTAAGTGCATTTAATTCATCTTGAGGAAGAAGCCC
JMFF004C24+ CTTCCCCATTTGCTCACCTATTTCCTTCAGTGCATTTAATTCATGTTGAGGAAGATGCCC
JMSF003G05+ CTTCCCCAGTTGTTCTGCTATTTCCTTCAGTGCATTTA
JMSF006F04+ CTTCCCCACTTCATTACCTATTTCTTTAAGTGCATTTAATTCATCTGGAGGAAGATGCCC
JMSF019I17+ CTTCCCCACTTGATCTG
JMFS165G07+ CTTCCCCAGTTGATCACCTATTTCCTTAAGTGCATTTAATTCATCTTGAGGAAGAAGCCC
JMSF023E11+ CTTCCCCACTTCATCTGCTATTTCTCTAAGTGCATTTAATTCATCTAGGGGAAGATGCCC
JMSF042J02+ CTTCCCCAGTTGATCACCTATTTCCTTAAGTGCATTTAATTCATCTTGAGGAAGAAGCCC
JMSF006D14+ CTTCCCCAGTTGATCACCTATTTCCTTAAGTGCATTTAATTCATCTTGAGGAAGAAGCCC
____________________________________________________________
consensus CTTCCCCAGTTGATCACCTATTTCCTTAAGTGCATTTAATTCATCTTGAGGAAGAAGCCC
. : . : . : . : . : . :
JMSF041F08+ AGTCTGTGCTTCAAGAAATATAGGATAG---AAGAAGAAGGAGAGTATAATTGGTATGAG
JMFF004C24+ ACTCTGCGCTTCAAGAAATATAGGATAGAAGA
JMSF006F04+ ACTCTGTGCTTCAACAAATATAGGATAGAAGAAGAAGAAGGAGAGTATAGTTGGTATGAG
JMFS165G07+ AGTCTGTGCTTCAAGAAATATAGGATAG---AAGAAGAAGGAGAGTATAATTGGTATGAG
JMSF023E11+ ACTCTGTGCTTCAACAAAGATAGGATAG---AAGAAGAAGGAGAGTATAATTGGTATGAG
JMSF042J02+ AGTCTGTGCTTCAAGAAATATAGGATAG---AAGAAGAAGGAGAGTATAATTGGTATGAG
JMSF006D14+ AGTCTGTGCTTCAAGAAATATAGGATAG---AAGAAGAAGGAGAGTATAATTGGTATGAG
____________________________________________________________
consensus AGTCTGTGCTTCAAGAAATATAGGATAG---AAGAAGAAGGAGAGTATAATTGGTATGAG
. : . : . : . : . : . :
JMSF041F08+ GATTATGAACATGGAAGCTGACATGATTGAACTCTGGGGAAGATCTGCTGC
JMSF006F04+ GATTATGAACATGGAGGCTGACATGCTTGAATTCTGGGGAAGA
JMFS165G07+ GATTATGAACATGGAAGCTGACATGATTGAACTCTGGGGAAGATCTG
JMSF023E11+ GATTATGAACATGGAGGCAAACATGCTTGAATTCTGGGGAAGTTCTGCTGC
JMSF042J02+ GATTATGAACATGGAAGCTGACATGATTGAACTCTGGGGAAGATCTGCTGC
JMSF006D14+ GATTATGAACATGGAAGCTGACATGATTGAACTCTGGGGAAGATCTGCTGCTGCAGTACC
____________________________________________________________
consensus GATTATGAACATGGAAGCTGACATGATTGAACTCTGGGGAAGATCTGCTGCTGCAGTACC