clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFN032J22 | Sequence | 511 | 000594 (6) | ref|XP_003616767.1| | 3e-27 | Protein transport protein SEC61 gamma subunit [Medicago truncatula] | |||||
JMFS047E03 | Sequence | 490 | 000594 (6) | ref|XP_003616767.1| | 3e-27 | Protein transport protein SEC61 gamma subunit [Medicago truncatula] | |||||
JMFS079A04 | Sequence | 504 | 000594 (6) | ref|XP_003616767.1| | 3e-27 | Protein transport protein SEC61 gamma subunit [Medicago truncatula] | |||||
JMFS079A05 | Sequence | 504 | 000594 (6) | ref|XP_003616767.1| | 3e-27 | Protein transport protein SEC61 gamma subunit [Medicago truncatula] | |||||
JMSF005P17 | Sequence | 267 | 000594 (6) | emb|CDP16700.1| | 1e-26 | unnamed protein product [Coffea canephora] | |||||
JMSF005P19 | Sequence | 264 | 003487 (5) | ref|XP_010665226.1| | 65.5 | PREDICTED: uncharacterized protein LOC104882706 [Vitis vinifera] | 152 | 000594 (6) |
This contig is upended
. : . : . : . : . : . :
JMFS079A04+ AAAACAAATTTGATTGATCACTTTATA
JMFS079A05+ AAAACAAATTTGATTGATCACTTTATA
JMFS047E03+ AAAACAAATTTGATTGATCACTTTATA
JMFN032J22+ AATGTTCAAAACAAATTTGATTGATCACTTTATA
____________________________________________________________
consensus AATGTTCAAAACAAATTTGATTGATCACTTTATA
. : . : . : . : . : . :
JMFS079A04+ ATGGTAGCTAACATCATCATAACAAATAAGGGTAGACCAAGGTAAAACTACATACAGTCA
JMFS079A05+ ATGGTAGCTAACATCATCATAACAAATAAGGGTAGACCAAGGTAAAACTACATACAGTCA
JMFS047E03+ ATGGTAGCTAACATCATCATAACAAATAAGGGTAGACCAAGGTAAAACTACATACAGTCA
JMFN032J22+ ATGGTAGCTAACATCATCATAACAAATAAGGGTAGACCAAGGTAAAACTACATACAGTCA
____________________________________________________________
consensus ATGGTAGCTAACATCATCATAACAAATAAGGGTAGACCAAGGTAAAACTACATACAGTCA
. : . : . : . : . : . :
JMFS079A04+ GTACAAATATTGAAATTTAACTGTTGTGAACCCTAACTCAGACTGGAAAAACGAACAACA
JMFS079A05+ GTACAAATATTGAAATTTAACTGTTGTGAACCCTAACTCAGACTGGAAAAACGAACAACA
JMFS047E03+ GTACAAATATTGAAATTTAACTGTTGTGAACCCTAACTCAGACTGGAAAAACGAACAACA
rJMSF005P19- TGAAATTTAACTGTTGTGAACCCTAACTCAGACTGGATAAACGAACAACA
JMFN032J22+ GTACAAATATTGAAATTTAACTGTTGTGAACCCTAACTCAGACTGGAAAAACGAACAACA
____________________________________________________________
consensus GTACAAATATTGAAATTTAACTGTTGTGAACCCTAACTCAGACTGGAAAAACGAACAACA
. : . : . : . : . : . :
JMFS079A04+ AAACATCTATGCTACTTGAGGTGCATCCCACTGCATTAGTGATTCCCATGGTAGCGAGGC
JMFS079A05+ AAACATCTATGCTACTTGAGGTGCATCCCACTGCATTAGTGATTCCCATGGTAGCGAGGC
JMFS047E03+ AAACATCTATGCTACTTGAGGTGCATCCCACTGCATTAGTGATTCCCATGGTAGCGAGGC
rJMSF005P19- NAACATCTATGCTANTTGAGGTGCATCCCACTGCATTAGTGANTCCCATGGT
JMFN032J22+ AAACATCTATGCTACTTGAGGTGCATCCCACTGCATTAGTGATTCCCATGGTAGCGAGGC
____________________________________________________________
consensus AAACATCTATGCTACTTGAGGTGCATCCCACTGCATTAGTGATTCCCATGGTAGCGAGGC
. : . : . : . : . : . :
JMFS079A04+ AGATCAGTCCTGATGACCAGCATCAACCAGATCCGACGATAATGTTGTTGATGGGGATGA
JMFS079A05+ AGATCAGTCCTGATGACCAGCATCAACCAGATCCGACGATAATGTTGTTGATGGGGATGA
JMFS047E03+ AGATCAGTCCTGATGACCAGCATCAACCAGATCCGACGATAATGTTGTTGATGGGGATGA
JMFN032J22+ AGATCAGTCCTGATGACCAGCATCAACCAGATCCGACGATAATGTTGTTGATGGGGATGA
JMSF005P17+ CGACGATAATGTTGTTGATGGGGATGA
____________________________________________________________
consensus AGATCAGTCCTGATGACCAGCATCAACCAGATCCGACGATAATGTTGTTGATGGGGATGA
. : . : . : . : . : . :
JMFS079A04+ AAATCAGCTTGACGAAGAACCCTACAAATCCCATTACCACGAACCCGATCGCAGTTCGAA
JMFS079A05+ AAATCAGCTTGACGAAGAACCCTACAAATCCCATTACCACGAACCCGATCGCAGTTCGAA
JMFS047E03+ AAATCAGCTTGACGAAGAACCCTACAAATCCCATTACCACGAACCCGATCGCAGTTCGAA
JMFN032J22+ AAATCAGCTTGACGAAGAACCCTACAAATCCCATTACCACGAACCCGATCGCAGTTCGAA
JMSF005P17+ AAATCAGCTTGACGAAGAACCCTACAAATCCCATTACCACGAACCCGATCGCAGTTCGAA
____________________________________________________________
consensus AAATCAGCTTGACGAAGAACCCTACAAATCCCATTACCACGAACCCGATCGCAGTTCGAA
. : . : . : . : . : . :
JMFS079A04+ CCGCTACTTTCGAGAATTCTTTGCGGTCGGGCTTGTGGCATCTCTTGACGAGACGGACGC
JMFS079A05+ CCGCTACTTTCGAGAATTCTTTGCGGTCGGGCTTGTGGCATCTCTTGACGAGACGGACGC
JMFS047E03+ CCGCTACTTTCGAGAATTCTTTGCGGTCGGGCTTGTGGCATCTCTTGACGAGACGGACGC
JMFN032J22+ CCGCTACTTTCGAGAATTCTTTGCGGTCGGGCTTGTGGCATCTCTTGACGAGACGGACGC
JMSF005P17+ CCGCTACTTTCGAGAATTCTTTGCGGTCGGGCTTGTGGCATCTCTTGACGAGACGGACGC
____________________________________________________________
consensus CCGCTACTTTCGAGAATTCTTTGCGGTCGGGCTTGTGGCATCTCTTGACGAGACGGACGC
. : . : . : . : . : . :
JMFS079A04+ TGTCCTTTGCGAAGTCTCTAAGAGGATCAAACACCGAATCCAAAGCATCCATTTCTCTCG
JMFS079A05+ TGTCCTTTGCGAAGTCTCTAAGAGGATCAAACACCGAATCCAAAGCATCCATTTCTCTCG
JMFS047E03+ TGTCCTTTGCGAAGTCTCTAAGAGGATCAAACACCGAATCCAAAGCATCCATTTCTCTCG
JMFN032J22+ TGTCCTTTGCGAAGTCTCTAAGAGGATCAAACACCGAATCCAAAGCATCCATTTCTCTCG
JMSF005P17+ TGTCCTTTGCGAAGTCTCTAAGAGGATCAAACACCGAATCCAAAGCATCCATTTCTCTCG
____________________________________________________________
consensus TGTCCTTTGCGAAGTCTCTAAGAGGATCAAACACCGAATCCAAAGCATCCATTTCTCTCG
. : . : . : . : . : . :
JMFS079A04+ ATCACGAAAACTTTAGCCTTTGCCGGAGAAGGGAAGCGATTGACGAGGCGGAT
JMFS079A05+ ATCACGAAAACTTTAGCCTTTGCCGGAGAAGGGAAGCGATTGACGAGGCGGAT
JMFS047E03+ ATCACGAAAACTTTAGCCTTTGCCGGAGAAGGGAAGCGATTGA
JMFN032J22+ ATCACGAAAACTTTAGCCTTTGCCGGAGAAGGGAAGCGATTGACGAGGCGGAT
JMSF005P17+ ATCACGAAAACTTTAGCCTTTGCCGGAGAAGGGAAGCGATTGACGAGGCGGATTCTGAGC
____________________________________________________________
consensus ATCACGAAAACTTTAGCCTTTGCCGGAGAAGGGAAGCGATTGACGAGGCGGATTCTGAGC