Contig 000590:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006C22Sequence358000590 (6)ref|XP_009777968.1|1e-29PREDICTED: putative chloride channel-like protein CLC-g isoform X1 [Nicotiana s
JMFF046K19Sequence644000590 (6)ref|XP_009777968.1|3e-89PREDICTED: putative chloride channel-like protein CLC-g isoform X1 [Nicotiana s537007242 (5)ref|XP_009777969.1|1e-57PREDICTED: putative chloride channel-like protein CLC-g isoform X2 [Nicotiana s
JMSF005H15Sequence242000590 (6)474014951ref|XP_009777969.1|6e-60PREDICTED: putative chloride channel-like protein CLC-g isoform X2 [Nicotiana s
JMSF014P18Sequence253000590 (6)692010069 (24)sp|O80362.1|RK10_TOBAC7e-117RecName: Full=50S ribosomal protein L10, chloroplastic; AltName: Full=CL10; Fla
JMSF017O08Sequence483000590 (6)ref|XP_009777968.1|2e-53PREDICTED: putative chloride channel-like protein CLC-g isoform X1 [Nicotiana s613007242 (5)ref|XP_009777969.1|1e-85PREDICTED: putative chloride channel-like protein CLC-g isoform X2 [Nicotiana s
JMSF036K07Sequence717000590 (6)ref|XP_010050093.1|2e-70PREDICTED: putative chloride channel-like protein CLC-g [Eucalyptus grandis] gb746007242 (5)ref|XP_009777969.1|2e-115PREDICTED: putative chloride channel-like protein CLC-g isoform X2 [Nicotiana s

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF036K07+ CCATTATAGCAGCAATGCATGCACCTGTATGAACCATGGGACCCG
                      ____________________________________________________________
consensus CCATTATAGCAGCAATGCATGCACCTGTATGAACCATGGGACCCG
 
. : . : . : . : . : . :
JMFF046K19+ AGCAGATATGCTACCAACAATCTTGACAAACA
JMSF036K07+ CCTTTCCAATATTAAGAGATGATGATACAGCAGATATGCTACCAACAATCTTGACAAACA
                      ____________________________________________________________
consensus CCTTTCCAATATTAAGAGATGATGATACAGCAGATATGCTACCAACAATCTTGACAAACA
 
. : . : . : . : . : . :
JMFF046K19+ ATGTTCTTAGAGAAAATATTACTGGGGCATCAACACCATTTAAATATGCCTTAACTTCAG
JMSF036K07+ ATGTTCTTAGAGAAAATATTACTGGGGCATCAACACCATTTAAATATGCCTTAACTTCAG
                      ____________________________________________________________
consensus ATGTTCTTAGAGAAAATATTACTGGGGCATCAACACCATTTAAATATGCCTTAACTTCAG
 
. : . : . : . : . : . :
JMFF046K19+ GTATACCCGAGCCAGCAGCTTCTGGTGCGATAAAAGCCGTAATTAAACTTGCAAATAGTG
JMSF036K07+ GTATACCCGAGCCAGCAGCTTCTGGTGCGATAAAAGCCGTAATTAAACTTGCAAATAGTG
                      ____________________________________________________________
consensus GTATACCCGAGCCAGCAGCTTCTGGTGCGATAAAAGCCGTAATTAAACTTGCAAATAGTG
 
. : . : . : . : . : . :
JMFF046K19+ TCAAACCAAAATTGGCAGATGTGAATACAAGAAAAGCTGCCAAGTACTTTCTAGCGAGCA
JMSF017O08+ GGCAGATGTGAATACAAGAAAAGCTGCCAAGTACTTTCTAGCGAGCA
JMSF036K07+ TCAAACCAAAATTGGCAGATGTGAATACAAGAAAAGCTGCCAAGTACTTTCTAGCGAGCA
                      ____________________________________________________________
consensus TCAAACCAAAATTGGCAGATGTGAATACAAGAAAAGCTGCCAAGTACTTTCTAGCGAGCA
 
. : . : . : . : . : . :
JMFF046K19+ TCATGTTGGAAGTCACAACAAATTTCACGCCAGCAATGTTGTCAACAGCAAGATTGTTGC
JMSF017O08+ TCATGTTGGAAGTCACAACAAATTTCACGCCAGCAATGTTTTCAACAGCAAGATTGTTGC
JMSF036K07+ TCATGTTGGAAGTCACAACAAATTTCACGCCAGCAATGTTTTCAACAGCAAGATTGTTGC
                      ____________________________________________________________
consensus TCATGTTGGAAGTCACAACAAATTTCACGCCAGCAATGTTTTCAACAGCAAGATTGTTGC
 
. : . : . : . : . : . :
JMFF046K19+ AGAACCCAACAAGACTGACAAGAAATCCAATGAGAAAACACAGGATCCATTTCATGCACA
JMSF017O08+ AGAACCCAACAAGACTTACAAGAAATCCAATGAGAAAACACAGGATCCATTTCATGCACA
JMFF006C22+ ACAAGAAATCCAATGAGAAAACACAGGATCCATTTCATGCACA
JMSF036K07+ AGAACCCAACAAGACTGACAAGAAATCCAATGAGAAAACACAGGATCCATTTCATGCAC-
                      ____________________________________________________________
consensus AGAACCCAACAAGACTGACAAGAAATCCAATGAGAAAACACAGGATCCATTTCATGCACA
 
. : . : . : . : . : . :
JMFF046K19+ CATACTGGAATATGTCAATCTTCCTTCCACTCCTCCAATCTTGCTTGAACAAGTCATTCT
JMSF017O08+ CATACTGGAATATGTCAATCTTCCTTCCACTCCTCCAATCTTGCTTGAACAAGTCATTCT
JMFF006C22+ CATACTGGAATATGTCAATCTTCCTTCCACTCCTCCAATCTTGCTTGAACAAGTCATTCT
JMSF036K07+ ---ACTGGAATATGTCAATCTTCCTTCCACTCCTCCAATCTTGCTTGAACAAGTCATTCT
                      ____________________________________________________________
consensus CATACTGGAATATGTCAATCTTCCTTCCACTCCTCCAATCTTGCTTGAACAAGTCATTCT
 
. : . : . : . : . : . :
JMFF046K19+ CTACTATCTCGTAATCGAGGCTTTCAATCGGGCAGACGTTGGAGCCGACGATGGCGACTT
JMSF017O08+ CTACTATCTCGTAATCGAGGCTTTCAATCGGGCAGACGTTGGAGCCGACGATGGCGACTT
JMFF006C22+ CTACTATCTCGTAATCGAGGCTTTCAATCGGGCAGACGTTGGAGCCGACGATGGCGACTT
JMSF036K07+ CTACTATCTCGTAATCGAGGCTTTCAATCGGGCAGACGTTGGAGCCGACGATGGCGACTT
                      ____________________________________________________________
consensus CTACTATCTCGTAATCGAGGCTTTCAATCGGGCAGACGTTGGAGCCGACGATGGCGACTT
 
. : . : . : . : . : . :
JMFF046K19+ GGGAAGTGCAGTTGGAAGCGGATCGCCGGAGGAGGTTGTTATTGTGGTTGAGCAGGGGCT
JMSF017O08+ GGGAAGTGCAGTTGGAAGCGGATCGCCGGAGGAGGTTGTTATTGTGGTTGAGCAGGGGCT
JMFF006C22+ GGGAAGTGCAGTTGGAAGCGGATCGCCGGAGGAGGTTGTTATTGTGGTTGAGCAGGGGCT
JMSF036K07+ GGGAAGTGCAGTTGGAAGCGGATCGCCGGAGGAGGTTGTTATTGTGGTTGAGCAGGGGCT
JMSF014P18+ GGATCGCCGGAGGAGGTTGTTATTGTGGTTGAGCAGGGGCT
                      ____________________________________________________________
consensus GGGAAGTGCAGTTGGAAGCGGATCGCCGGAGGAGGTTGTTATTGTGGTTGAGCAGGGGCT
 
. : . : . : . : . : . :
JMFF046K19+ GAGTGACTGCCTCCATGTCTCCTTCCGCGGCCGGAGTTGGCGGTTCTGCGCCCACGACAA
JMSF017O08+ GAGTGACTGCCTCCATGTCTCCTTCCGCGGCCGGAGTTGGCGGTTCTGCGCCCACGACAA
JMFF006C22+ GAGTGACTGCCTCCATGTCTCCTTCCGCGGCCGGAGTTGGCGGTTCTGCGCCCACGACAA
JMSF036K07+ GAGTGACTGCCTCCATGTCTCCTTCCGCGGCCGGAGTTGGCGGTTCTGCGCCCACGACAA
JMSF014P18+ GAGTGACTGCCTCCATGTCTCCTTCCGCGGCCGGAGTTGGCGGTTCTGCGCCCACGACAA
JMSF005H15+ AA
                      ____________________________________________________________
consensus GAGTGACTGCCTCCATGTCTCCTTCCGCGGCCGGAGTTGGCGGTTCTGCGCCCACGACAA
 
. : . : . : . : . : . :
JMFF046K19+ CTGTGGGCGGCATGGGAGAGCGTGAAGGTGAAGTAAGGAAATGGCAGTTACTGTGAATCC
JMSF017O08+ CTGTGGGCGGCATGGGAGAGCGTGAAGGTGAAGTAAGGAAATGGCAGTTACTGTGAATCC
JMFF006C22+ CTGTGGGCGGCATGGGAGAGCGTGAAGGTGAAGTAAGGAAATGGCAGTTACTGTGAATCC
JMSF036K07+ CTGTGGGCGGCATGGGAGAGCGTGAAGGTGAAGTAAGGAAATGGCAGTTACTGTGAATCC
JMSF014P18+ CTGTGGGCGGCATGGGAGAGCGTGAAGGTGAAGTAAGGAAATGGCAGTTACTGTGAATCC
JMSF005H15+ CTGTGGGCGGCATGGGAGAGCNTGAAGGTGAAGTAAGGAAATGGCAGTTACTGTGAATCC
                      ____________________________________________________________
consensus CTGTGGGCGGCATGGGAGAGCGTGAAGGTGAAGTAAGGAAATGGCAGTTACTGTGAATCC
 
. : . : . : . : . : . :
JMFF046K19+ TCGCCGGTCGCC
JMSF017O08+ TCGCCGGTCGCC
JMFF006C22+ TCGCCGGTCGCC
JMSF036K07+ TCGCCGGTCGCCGA
JMSF014P18+ TCGCCGGTCGCCGACAAGGATTGGGATACAGGAGAAAGTATAAATATGGTCCCAACTACC
JMSF005H15+ TCNCCGGTCGCCGACAAGGATTGGGATACAGGAGAAAGTATAAATATGGTCCCAACTACC
                      ____________________________________________________________
consensus TCGCCGGTCGCCGACAAGGATTGGGATACAGGAGAAAGTATAAATATGGTCCCAACTACC
 
. : . : . : . : . : . :
JMSF014P18+ CAAAGTGAGTAAAAATTTCTTCAAAATATACC
JMSF005H15+ CAAAGTGAGTAAAAATTTCTTCAAAATATACGAAAGCGATTTCAATTTGTTTATTTATAA
                      ____________________________________________________________
consensus CAAAGTGAGTAAAAATTTCTTCAAAATATACGAAAGCGATTTCAATTTGTTTATTTATAA
 
. : . : . : . : . : . :
JMSF005H15+ CAAGGAGAAATCGTCNGTCTATGTNTAAACCTGAAATCGTCCGTCCATGTCTAAACCTTC
                      ____________________________________________________________
consensus CAAGGAGAAATCGTCNGTCTATGTNTAAACCTGAAATCGTCCGTCCATGTCTAAACCTTC