Contig 000588:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF035D01+                                                         AGCAGGGTCCGATG
                      ____________________________________________________________
consensus                                                           AGCAGGGTCCGATG
 
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JMSF035A19+                                                       AAACNTCCCAAATCCC
JMSF035D01+           ATCGAAGTCCAATGGCTGGTTCTATAGCAAGCAACCAAGCTGGAAAACCTCCCAAATCCC
                      ____________________________________________________________
consensus             ATCGAAGTCCAATGGCTGGTTCTATAGCAAGCAACCAAGCTGGAAAACCTCCCAAATCCC
 
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JMSF035A19+           ACTCTCCACAGATATATGGTCCAATTNGAAGCATAACTAGTAAATCCAGTTTNTGGCAAA
JMSF035D01+           ACTCTCCACAGATATATGGTCCAATTCGAAGCATAACTAGTAAATCCAGTTTCTGGCAAA
                      ____________________________________________________________
consensus             ACTCTCCACAGATATATGGTCCAATTCGAAGCATAACTAGTAAATCCAGTTTCTGGCAAA
 
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JMSF035A19+           GGCTCAAAAATGAAAAGATATCTGCGATTCCTTCAAAAGTCAATTGGCCTGGTCTTGGTT
JMSF035D01+           GGCTCAAAAATGAAAAGATATCTGCGATTCCTTCAAAAGTCAATTGGCCTGGTCTTGGTT
                      ____________________________________________________________
consensus             GGCTCAAAAATGAAAAGATATCTGCGATTCCTTCAAAAGTCAATTGGCCTGGTCTTGGTT
 
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JMSF035A19+           CATGTAAATTCCATGCAACATAAGTTTGAATTGTATTCAATCCTAATGCCTTTGCTCTCA
JMSF035D01+           CATGTAAATTCCATGCAACATAAGTTTGAATTGTATTCAATCCTAATGCCTTTGCTCTCA
                      ____________________________________________________________
consensus             CATGTAAATTCCATGCAACATAAGTTTGAATTGTATTCAATCCTAATGCCTTTGCTCTCA
 
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JMSF035A19+           ATAATCTATCTTCCCAGTACTCAGGAAGAGTCCGAAAGTAATGCACATCGCCTCCAATTA
JMSF035D01+           ATAATCTATCTTCCCAGTACTCAGGAAGAGTCCGAAAGTAATGCACATCGCCTCCAATTA
                      ____________________________________________________________
consensus             ATAATCTATCTTCCCAGTACTCAGGAAGAGTCCGAAAGTAATGCACATCGCCTCCAATTA
 
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JMSF035A19+           TCCGGAAAGGTCTTCCATCTTTCCAGAACATATCATCCGCGATCTCAAATTTCCTGTCGC
JMSF035D01+           TCCGGAAAGGTCTTCCATCTTTCCAGAACATATCATCCGCGATCTCAAATTTCCTGTCGC
JMSF005C22+                                                                  GTCGC
                      ____________________________________________________________
consensus             TCCGGAAAGGTCTTCCATCTTTCCAGAACATATCATCCGCGATCTCAAATTTCCTGTCGC
 
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JMSF035A19+           CGTCACTGGATTTAGATAGGGAAGACGGAGAGGATATGGAAGGCAGCGGAGCAAACACTG
JMSF035D01+           CGTCACTGGATTTAGATAGGGAAGACGGAGAGGATATGGAAGGCAGCGGAGCAAACACTG
JMSF005C22+           CGTCACTGGATTTAGATAGGGAAGACGGAGAGGATATGGAAGGCAGCGGAGCAAACACTG
                      ____________________________________________________________
consensus             CGTCACTGGATTTAGATAGGGAAGACGGAGAGGATATGGAAGGCAGCGGAGCAAACACTG
 
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JMSF035A19+           GCGTGAAAGCTCCAAACGAGAATATAGAAAGCAGGAATATCAGTATCGTGGTTCCGAGCC
JMSF035D01+           GCGTGAAAGCTCCAAACGAGAATATAGAAAGCAGGAATATCAGTATCGTGGTTCCGAGCC
JMSF005C22+           GCGTGAAAGCTCCAAACGAGAATATAGAAAGCAGGAATATCAGTATCGTGGTTCCGAGCC
                      ____________________________________________________________
consensus             GCGTGAAAGCTCCAAACGAGAATATAGAAAGCAGGAATATCAGTATCGTGGTTCCGAGCC
 
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JMSF035A19+           GGCGTGTTCTGGCCATTGTTGCCGGTCGAAGTCTGAGCTGCGCCGCCGGAGCTCCGATGC
JMSF035D01+           GGCGTGTTCTGGCCATTGTTGCCGGTCGAAGTCTGAGCTGCGCCGCCGGAGCTCCGATGC
JMSF005C22+           GGCGTGTTCTGGCCATTGTTGCCGGTCGAAGTCTGAGCTGCGCCGCCGGAGCTCCGATGC
                      ____________________________________________________________
consensus             GGCGTGTTCTGGCCATTGTTGCCGGTCGAAGTCTGAGCTGCGCCGCCGGAGCTCCGATGC
 
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JMSF035A19+           TCGGAGTAACAGTTTTCTTCAGCGCGGTTCGCATGGAGTGTGGCGCTTCTTCCAGAATTC
JMSF035D01+           TCGGAGTAACAGTTTTCTTCAGCGCGGTTCGCATGGAGTGTGGCGCTTCTTCCAGAATTC
JMSF005C22+           TCGGAGTAACAGTTTTCTTCAGCGCGGTTCGCATGGAGTGTGGCGCTTCTTCCAGAATTC
                      ____________________________________________________________
consensus             TCGGAGTAACAGTTTTCTTCAGCGCGGTTCGCATGGAGTGTGGCGCTTCTTCCAGAATTC
 
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JMSF035A19+           AGCTCAACTCCATTTCTGCTCC                                      
JMSF035D01+           AGCTCAACTCCATTTCTGCTCCAAGGAGAGTGAGTAGTGATTAGGAAGTCAACAAGTCCG
JMSF005C22+           AGCTCAACTCCATTTCTGCTCCAAGGAGAGTGAGTAGTGATTAGGAAGTCAACAAGTCCG
                      ____________________________________________________________
consensus             AGCTCAACTCCATTTCTGCTCCAAGGAGAGTGAGTAGTGATTAGGAAGTCAACAAGTCCG
 
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JMSF035D01+           GTAATGTTTTCGTTAACAACTTCTT                                   
JMSF005C22+           GTAATGTTTTCGTTAACAACTTCTTTGGCTTCGCACCAATTCAATAATTTCAGAGACTTC
                      ____________________________________________________________
consensus             GTAATGTTTTCGTTAACAACTTCTTTGGCTTCGCACCAATTCAATAATTTCAGAGACTTC