Contig 000584:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF004N05Sequence398000584 (2)ref|XP_009790324.1|3e-36PREDICTED: heat stress transcription factor A-1b [Nicotiana sylvestris]284006647 (13)dbj|BAD02268.1|2e-16aspartate aminotransferase [Nicotiana tabacum]
JMSF042D10Sequence795000584 (2)ref|XP_009790324.1|5e-108PREDICTED: heat stress transcription factor A-1b [Nicotiana sylvestris]751024654ref|XP_009790324.1|3e-42PREDICTED: heat stress transcription factor A-1b [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF042D10+ CACTCCAGAAATGCGCACTTTGTCACTNTGCT
                      ____________________________________________________________
consensus CACTCCAGAAATGCGCACTTTGTCACTNTGCT
 
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JMSF042D10+ GATGAACCATCTGGGCTACAAAACTAGGGCTTTGCATGGCCTTTGCAAGGAATGACATCA
                      ____________________________________________________________
consensus GATGAACCATCTGGGCTACAAAACTAGGGCTTTGCATGGCCTTTGCAAGGAATGACATCA
 
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JMSF042D10+ TTTGCTGCTGCCGCTGTTCCATCATATGAACCTTCTGCCCAACATTCTGCAACTGGTGAT
                      ____________________________________________________________
consensus TTTGCTGCTGCCGCTGTTCCATCATATGAACCTTCTGCCCAACATTCTGCAACTGGTGAT
 
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JMSF042D10+ CTGTTGCCTGCTGCTGTTGTCTCAACTTGACAAGCTCCTGCATGAGAATATTTTTATCTC
                      ____________________________________________________________
consensus CTGTTGCCTGCTGCTGTTGTCTCAACTTGACAAGCTCCTGCATGAGAATATTTTTATCTC
 
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JMSF042D10+ TTTTAAGCCTATCCACCTCTTCCTCTAGCCCAAATTTCCCAACTTCAACACATGATCCAA
                      ____________________________________________________________
consensus TTTTAAGCCTATCCACCTCTTCCTCTAGCCCAAATTTCCCAACTTCAACACATGATCCAA
 
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JMSF042D10+ CTGAACTGTTTTGAACTTGAGGTGGTGGTGGTTGATGTGACTGCACATGCTTTCTCCTGG
                      ____________________________________________________________
consensus CTGAACTGTTTTGAACTTGAGGTGGTGGTGGTTGATGTGACTGCACATGCTTTCTCCTGG
 
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JMSF042D10+ TTATACTCTTTAAGAGGTGTCTATGACCTCTAAGAAATCCCTCATTAGCAAACTCCCAGC
                      ____________________________________________________________
consensus TTATACTCTTTAAGAGGTGTCTATGACCTCTAAGAAATCCCTCATTAGCAAACTCCCAGC
 
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JMSF042D10+ GATCAGGGTCGACTTTCCTGAACCCGTAAGTGTTCAATTGTCTGACAAAACTGGAGAAAT
JMSF004N05+ CCCGTAAGTGTTCAATTGTCTGACAAAACTGGAGAAAT
                      ____________________________________________________________
consensus GATCAGGGTCGACTTTCCTGAACCCGTAAGTGTTCAATTGTCTGACAAAACTGGAGAAAT
 
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JMSF042D10+ TGTTGTGCTTGAAGTACTTGGGCAAAATATCTTTAGCGAACTCGGGGACGTTCCACACGA
JMSF004N05+ TGTTGTGCTTGAAGTACTTGGGCAAAATATCTTTAGCGAACTCGGGGACGTTCCACACGA
                      ____________________________________________________________
consensus TGTTGTGCTTGAAGTACTTGGGCAAAATATCTTTAGCGAACTCGGGGACGTTCCACACGA
 
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JMSF042D10+ CGAAACTGTTATTGCTCTTGCTCCAGGACACCACGGCGTCCGTCGACGGATCCTCCACCA
JMSF004N05+ CGAAACTGTTATTGCTCTTGCTCCAGGACACCACGGCGTCCGTCGACGGATCCTCCACCA
                      ____________________________________________________________
consensus CGAAACTGTTATTGCTCTTGCTCCAGGACACCACGGCGTCCGTCGACGGATCCTCCACCA
 
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JMSF042D10+ TATCATACGTTTTGCTCAGAAAAGGCGGCGGCGAATTCCCGGCAGCCGCGGCGGCGCTTT
JMSF004N05+ TATCATACGTTTTGCTCAGAAAAGGCGGCGGCGAATTCCCGGCAGCCGCGGCGGCGCTTT
                      ____________________________________________________________
consensus TATCATACGTTTTGCTCAGAAAAGGCGGCGGCGAATTCCCGGCAGCCGCGGCGGCGCTTT
 
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JMSF042D10+ CCTGACCACCGTCCATGTTTCCCGATGGTCCTCCACTTAGGTAGACTCGCCTGACGCTTC
JMSF004N05+ CCTGACCACCGTCCATGTTTCCCGATGGTCCTCCACTTAGGTAGACTCGCCTGACGCTTC
                      ____________________________________________________________
consensus CCTGACCACCGTCCATGTTTCCCGATGGTCCTCCACTTAGGTAGACTCGCCTGACGCTTC
 
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JMSF042D10+ TGACGATCAACGAAATTGTAGATATTAGATCAGGATAGAGAGAGTGAGAGAGCGATGAAG
JMSF004N05+ TGACGATCAACGAAATTGTAGATATTAGATCAGGATAGAGAGAGTGAGAGAGCGATGAAG
                      ____________________________________________________________
consensus TGACGATCAACGAAATTGTAGATATTAGATCAGGATAGAGAGAGTGAGAGAGCGATGAAG
 
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JMSF042D10+ ATGAGAGAGAAAGAGGTATGGAGGAAGGGAAAGGAATGGAGC
JMSF004N05+ ATGAGAGAGAAAGAGGTATGGAGGAAGGGAAAGGAATGGAGCGACGAGTGACTGGCACCC
                      ____________________________________________________________
consensus ATGAGAGAGAAAGAGGTATGGAGGAAGGGAAAGGAATGGAGCGACGAGTGACTGGCACCC