Contig 000566:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007C09Sequence533000566 (9)ref|XP_006347560.1|9e-72PREDICTED: uncharacterized protein At1g51745-like isoform X1 [Solanum tuberosum759008143 (3)ref|XP_004235289.1|2e-69PREDICTED: uncharacterized protein At1g51745 [Solanum lycopersicum]
JMFS035H10Sequence571000566 (9)ref|XP_010322496.1|8e-10PREDICTED: uncharacterized protein At1g51745-like [Solanum lycopersicum]
JMFS045F10Sequence627000566 (9)ref|XP_010322496.1|4e-32PREDICTED: uncharacterized protein At1g51745-like [Solanum lycopersicum]
JMFS045H06Sequence564000566 (9)ref|XP_010322496.1|3e-07PREDICTED: uncharacterized protein At1g51745-like [Solanum lycopersicum]
JMFS074G03Sequence638000566 (9)ref|XP_010322496.1|1e-15PREDICTED: uncharacterized protein At1g51745-like [Solanum lycopersicum]
JMFS131H04Sequence626000566 (9)ref|XP_010322496.1|2e-14PREDICTED: uncharacterized protein At1g51745-like [Solanum lycopersicum]
JMSF003I12Sequence364000566 (9)687002755 (4)ref|XP_009783633.1|3e-33PREDICTED: uncharacterized protein At1g51745-like [Nicotiana sylvestris]
JMSF009O15Sequence231000566 (9)740002755 (4)ref|XP_006347560.1|8e-36PREDICTED: uncharacterized protein At1g51745-like isoform X1 [Solanum tuberosum
JMSF018C02Sequence441000566 (9)726002755 (4)ref|XP_006347560.1|8e-85PREDICTED: uncharacterized protein At1g51745-like isoform X1 [Solanum tuberosum

Alignment

This contig is upended


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JMFF007C09+                                               GCTGGAGACCAGAACTCTCAGAAG
                      ____________________________________________________________
consensus                                                 GCTGGAGACCAGAACTCTCAGAAG
 
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JMFF007C09+           CTTTATGAGATTTCAGGGATAACTGTTCTTGATTTTGATATTCGAAGCATTCTGGGGATG
                      ____________________________________________________________
consensus             CTTTATGAGATTTCAGGGATAACTGTTCTTGATTTTGATATTCGAAGCATTCTGGGGATG
 
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JMFF007C09+           TCACTACATCTCTTCTTACATTGTCATCTGGTGATTTATTTATTTTATCATTACATGAAT
                      ____________________________________________________________
consensus             TCACTACATCTCTTCTTACATTGTCATCTGGTGATTTATTTATTTTATCATTACATGAAT
 
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JMFF007C09+           AACTTGTTTTCCCATTTTTGGCCCCTGCTAGTTGCCTCTCAAGTTCAAGAGCATGAATTA
                      ____________________________________________________________
consensus             AACTTGTTTTCCCATTTTTGGCCCCTGCTAGTTGCCTCTCAAGTTCAAGAGCATGAATTA
 
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JMFF007C09+           TTGCATCTTCACGACGTGCGTATTTCTCTCTTTTCTTTGGAGGCATGCCTAGAGAAGCCT
                      ____________________________________________________________
consensus             TTGCATCTTCACGACGTGCGTATTTCTCTCTTTTCTTTGGAGGCATGCCTAGAGAAGCCT
 
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JMFF007C09+           CAGCTCGTTCAATACAGTCATCAAACTCACCACATCTGAAAGCCTTCACACGCTTTGACT
                      ____________________________________________________________
consensus             CAGCTCGTTCAATACAGTCATCAAACTCACCACATCTGAAAGCCTTCACACGCTTTGACT
 
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JMFF007C09+           TCTCCAAATTGTACCAATCCACACTAGCATCATCCCTTCCGAGAAGCTTCACTGCAGTTC
JMFS045F10+                              CACACTGGCATCTTCCCTCCCAAGAAGCTTGACTGGAGTTC
                      ____________________________________________________________
consensus             TCTCCAAATTGTACCAATCCACACTGGCATCTTCCCTTCCGAGAAGCTTGACTGGAGTTC
 
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JMFF007C09+           CAGATCGTGGTGTCATCACATGTGAAGTTGAAAGCTCATCTGGACCGAGAATTTTACCTG
JMFS045F10+           CTGATCGCGGAGACATCACATGAGAAGCAGAAAGCTCATCAGGCCCCAGAATTTTACCCG
JMFS035H10+                                              TCATCAGGCCCCAGAATTTTACCCG
JMFS045H06+                                                                     CG
JMFS131H04+                         ATCACATGAGAAGCAGAAAGCTCATCAGGCCCCAGAATTTTACCCG
JMFS074G03+                        CATCACATGAGAAGCAGAAAGCTCATCAGGCCCCAGAATTTTACCCG
                      ____________________________________________________________
consensus             CTGATCGTGGTGTCATCACATGAGAAGCAGAAAGCTCATCAGGCCCCAGAATTTTACCCG
 
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JMFF007C09+           GCCACCATGACCCATTTCGCCTCCGGACCCAAACAATGCACCCAGCACCACAATCAAGTA
JMFS045F10+           GCCACCATGACCCATTTCGCCTCCGGACCCAAACAATACTCCCAACTCCACAATCAACCA
JMFS035H10+           GCCACCATGACCCATTCGGCCTCCGGACCCAAACAATACTCCCAACTCCACAATCAACCA
JMFS045H06+           GCCACCATGACCCATTTCGCCTCCGGACCCAAACAATACTCCCAACTCCACAATCAACCA
JMFS131H04+           GCCACCATGACCCATTTCGCCTCCGGACCCAAACAATACTCCCAACTCCACAATCAACCA
JMFS074G03+           GCCACCATGACCCATTTCGCCTCCGGACCCAAACAATACTCCCAACTCCACAATCAACCA
                      ____________________________________________________________
consensus             GCCACCATGACCCATTTCGCCTCCGGACCCAAACAATACTCCCAACTCCACAATCAACCA
 
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JMFF007C09+           TTCCTTCTTCTGTTTCCGAGCT                                      
JMFS045F10+           TTCCTTGTTCCGTTTCCGAGCTTCCCATCTCTTCCCACCACACTCACACACGCACTCTCC
JMFS035H10+           TTCCTTGTTCCGTTTCCGAGCTTCCCATCTCTTCCCACCACACTCACACACGCACTCTCC
JMFS045H06+           TTCCTTGTTCCGTTTCCGAGCTTCCCATCTCTTCCCACCACACTCACACACGCTCTCTCC
JMFS131H04+           TTCCTTGTTCCGTTTCCGAGCTTCCCATCTCTTCCCACCACACTCACACACGCACTCTCC
JMFS074G03+           TTCCTTGTTCCGTTTCCGAGCTTCCCATCTCTTCCCACCACACTCACACACGCACTCTCC
                      ____________________________________________________________
consensus             TTCCTTGTTCCGTTTCCGAGCTTCCCATCTCTTCCCACCACACTCACACACGCACTCTCC
 
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JMFS045F10+           CTCTATTAAAAAAAAATTACAATCCAGAAGTATATGTCTGTATATACTATATACTTATAT
JMFS035H10+           CTCTATTAAAAAAAAATTACAATCCAGAAGTATATGTCTGTATATACTATATACTTATAT
JMFS045H06+           CTCTATTAAAAAAAAATTACAATCCAGAAGTATATGTCTGTATATACTATATACTTATAT
JMFS131H04+           CTCTATTAAAAAAAAATTACAATCCAGAAGTATATGTCTGTATATACTATATACTTATAT
JMFS074G03+           CTCTATTAAAAAAAAATTACAATCCAGAAGTATATGTCTGTATATACTATATACTTATAT
JMSF018C02+                                                  GTATATACTATATACTTATAT
                      ____________________________________________________________
consensus             CTCTATTAAAAAAAAATTACAATCCAGAAGTATATGTCTGTATATACTATATACTTATAT
 
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JMFS045F10+           ATACTGCTAAAATACAGGTATCACTATCACTTTACTATCTTCAGTAAATATTTTCCCCGA
JMFS035H10+           ATACTGCTAAAATACAGGTATCACTATCACTTTACTATCTTCAGTAAATATTTTCCCCGA
JMFS045H06+           ATACTGCTAAAATACAGGTATCACTATCACTTTACTATCTTCAGTAAATATTTTCCCCGA
JMFS131H04+           ATACTGCTAAAATACAGGTATCACTATCACTTTACTATCTTCAGTAAATATTTTCCCCGA
JMFS074G03+           ATACTGCTAAAATACAGGTATCACTATCACTTTACTATCTTCAGTAAATATTTTCCCCGA
JMSF018C02+           ATACTGCTAAAATACAGGTATCACTATCACTTTACTATCTTCAGTAAATATTTTCCCCGA
JMSF003I12+                                                                   CCGA
                      ____________________________________________________________
consensus             ATACTGCTAAAATACAGGTATCACTATCACTTTACTATCTTCAGTAAATATTTTCCCCGA
 
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JMFS045F10+           AACTTATATAACGCAATTGAAAAATAATATACGCGGAAAAGGGGAAAAAATATGTAAAGA
JMFS035H10+           AACTTATATAACGCAATTGAAAAATAATATACGCGGAAAAGGGGAAAAAATATGTAAAGA
JMFS045H06+           AACTTATATAACGCAATTGAAAAATAATATACGCGGAAAAGGGGAAAAAATATGTAAAGA
JMFS131H04+           AACTTATATAACGCAATTGAAAAATAATATACGCGGAAAAGGGGAAAAAATATGTAAAGA
JMFS074G03+           AACTTATATAACGCAATTGAAAAATAATATACGCGGAAAAGGGGAAAAAATATGTAAAGA
JMSF018C02+           AACTTATATAACGCAATTGAAAAATAATATACGCGGAAAAGGGGAAAAAATATGTAAAGA
JMSF003I12+           AACTTATATAACGCAATTGAAAAATAATATACGCGGAAAAGGGGAAAAAATATGTAAAGA
                      ____________________________________________________________
consensus             AACTTATATAACGCAATTGAAAAATAATATACGCGGAAAAGGGGAAAAAATATGTAAAGA
 
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JMFS045F10+           GAGCTCACAAATACAAACACTGTAGATGATCAAAGGAAAGATGATTTAGGGCATTTGATT
JMFS035H10+           GAGCTCACAAATACAAACACTGTAGATGATCAAAGGAAAGATGATTTAGGGCATTTGATT
JMFS045H06+           GAGCTCACAAATACAAACACTGTAGATGATCAAAGGAAAGATGATTTAGGGCATTTGATT
JMFS131H04+           GAGCTCACAAATACAAACACTGTAGATGATCAAAGGAAAGATGATTTAGGGCATTTGATT
JMFS074G03+           GAGCTCACAAATACAAACACTGTAGATGATCAAAGGAAAGATGATTTAGGGCATTTGATT
JMSF018C02+           GAGCTCACAAATACAAACACTGTAGATGATCAAAGGAAAGATGATTTAGGGCATTTGATT
JMSF003I12+           GAGCTCACAAATACAAACACTGTAGATGATCAAAGGAAAGATGATTTAGGGCATTTGATT
                      ____________________________________________________________
consensus             GAGCTCACAAATACAAACACTGTAGATGATCAAAGGAAAGATGATTTAGGGCATTTGATT
 
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JMFS045F10+           GATCAGCCTCCGGAAAAGAAGAGAGTGAAATGGATTTGCAGAAAGGCAGGTTTGGAAGAT
JMFS035H10+           GATCAGCCTCCGGAAAAGAAGAGAGTGAAATGGATTTGCAGAAAGGCAGGTTTGGAAGAT
JMFS045H06+           GATCAGCCTCCGGAAAAGAAGAGAGTGAAATGGATTTGCAGAAAGGCAGGTTTGGAAGAT
JMFS131H04+           GATCAGCCTCCGGAAAAGAAGAGAGTGAAATGGATTTGCAGAAAGGCAGGTTTGGAAGAT
JMFS074G03+           GATCAGCCTCCGGAAAAGAAGAGAGTGAAATGGATTTGCAGAAAGGCAGGTTTGGAAGAT
JMSF018C02+           GATCAGCCTCCGGAAAAGAAGAGAGTGAAATGGATTTGCAGAAAGGCAGGTTTGGAAGAT
JMSF009O15+                    CCGGAAAAGAAGAGAGTGAAATGGATTTGCAGAAAGGCAGGTTTGGAAGAT
JMSF003I12+           GATCAGCCTCCGGAAAAGAAGAGAGTGAAATGGATTTGCAGAAAGGCAGGTTTGGAAGAT
                      ____________________________________________________________
consensus             GATCAGCCTCCGGAAAAGAAGAGAGTGAAATGGATTTGCAGAAAGGCAGGTTTGGAAGAT
 
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JMFS045F10+           CGGAGTGTACAGATTGGGGCTAGGGTTAGGGTTTCCATTCAGAATTGGGGGAAATACAAA
JMFS035H10+           CGGAGTGTACAGATTGGGGCTAGGGTTAGGGTTTCCATTCAGAATTGGGGGAAATACATA
JMFS045H06+           CGGAGTGTACAGATTGGGGCTAGGGTTAGGGTTTCCATTCAGAATTGGGGGAAATACATA
JMFS131H04+           CGGAGTGTACAGATTGGGGCTAGGGTTAGGGTTTCCATTCAGAATTGGGGGAAATACATA
JMFS074G03+           CGGAGTGTACAGATTGGGGCTAGGGTTAGGGTTTCCATTCAGAATTGGGGGAAATACATA
JMSF018C02+           CGGAGTGTACAGATTGGGGCTAGGGTTAGGGTTTCCATTCAGAATTGGGGGAAATACATA
JMSF009O15+           CGGAGTGTACAGATTGGGGCTAGGGTTAGGGTTTCCATTCAGAATTGGGGGAAATACATA
JMSF003I12+           CGGAGTGTACAGATTGGGGCTAGGGTTAGGGTTTCCATTCAGAATTGGGGGAAATACATA
                      ____________________________________________________________
consensus             CGGAGTGTACAGATTGGGGCTAGGGTTAGGGTTTCCATTCAGAATTGGGGGAAATACATA
 
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JMFS045F10+           TCTAGGGATTTTGGTGAGAAATTACA                                  
JMFS035H10+           TCTAGGGATTTTGGTGAGAAATTACAGGGATCGATCGGGTGTAGGATTTGAGAATGGAAA
JMFS045H06+           TCTAGGGATTTTGGTGAGAAATTACAGGGATCGATCGGGTGTAGGATTTGAGAATGGAAA
JMFS131H04+           TCTAGGGATTTTGGTGAGAAATTACAGGGATCGATCGGGTGTAGGATTTGAGAATGGAAA
JMFS074G03+           TCTAGGGATTTTGGTGAGAAATTACAGGGATCGATCGGGTGTAGGATTTGAGAATGGAAA
JMSF018C02+           TCTAGGGATTTTGGTGAGAAATTACAGGGATCGATCGGGTGTAGGATTTGAGAATGGAAA
JMSF009O15+           TCTAGGGATTTTGGTGAGAAATTACAGGGATCGATCGGGTGTAGGATTTGAGAATGGAAA
JMSF003I12+           TCTAGGGATTTTGGTGAGAAATTACAGGGATCGATCGGGTGTAGGATTTGAGAATGGAAA
                      ____________________________________________________________
consensus             TCTAGGGATTTTGGTGAGAAATTACAGGGATCGATCGGGTGTAGGATTTGAGAATGGAAA
 
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JMFS035H10+           GCAAAT                                                      
JMFS045H06+           GCAAATTAGGGTTGAAATGCGT                                      
JMFS131H04+           GCAAATTAGGGTTGAAATGCGTGAATTTTGATCGAGTGAG                    
JMFS074G03+           GCAAATTAGGGTTGAAATGCGTGAATTTTGATCGAGTGAGAATCTGAA            
JMSF018C02+           GCAAATTAGGGTTGAAATGCGTGAATTTTGATCGAGTGAGAATCTGAAGAATCGCCG   
JMSF009O15+           GCAAATTAGGGTTGAAATGCGTGAATTTTGATCGAGTGAGAATCTGAAGAATCGCCG   
JMSF003I12+           GCAAATTAGGGTTGAAATGCGTGAATTTTGATCGAGTGAGAATCTGAAGAATCGCCGGTC
                      ____________________________________________________________
consensus             GCAAATTAGGGTTGAAATGCGTGAATTTTGATCGAGTGAGAATCTGAAGAATCGCCGGTC