Contig 000547:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS068A08Sequence613000547 (4)ref|XP_003552307.1|9e-64PREDICTED: stress response protein NST1-like [Glycine max]
JMSF002A01Sequence273000547 (4)743000547 (4)ref|XP_006357718.1|2e-74PREDICTED: stress response protein nst1-like isoform X1 [Solanum tuberosum] ref
JMSF040A23Sequence546000547 (4)gb|KDO49662.1|1e-42hypothetical protein CISIN_1g0026811mg [Citrus sinensis]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF002A01- GGCCCTTTCCCACGTTCTTTCNCACCCTCC
                      ____________________________________________________________
consensus GGCCCTTTCCCACGTTCTTTCNCACCCTCC
 
. : . : . : . : . : . :
rJMSF002A01- ATCCTATCATCACGCAATCTCCTGCGTTCTTCCACCAATCTAGCAACTTCCTCTCNTTGG
                      ____________________________________________________________
consensus ATCCTATCATCACGCAATCTCCTGCGTTCTTCCACCAATCTAGCAACTTCCTCTCNTTGG
 
. : . : . : . : . : . :
rJMSF002A01- ATTCTTTCTTCTTCCTCCAATAGTTCTTTCTCTAATCTAGCCAGCCTCTTCTCCTCTGCT
                      ____________________________________________________________
consensus ATTCTTTCTTCTTCCTCCAATAGTTCTTTCTCTAATCTAGCCAGCCTCTTCTCCTCTGCT
 
. : . : . : . : . : . :
rJMSF002A01- TTTCTTCGGGCTCTCTCCCCTTTACGCTCTTGAAAATTTTCTCCATTCTCACCTTTGTTA
                      ____________________________________________________________
consensus TTTCTTCGGGCTCTCTCCCCTTTACGCTCTTGAAAATTTTCTCCATTCTCACCTTTGTTA
 
. : . : . : . : . : . :
rJMSF002A01- TCCAGCATTCCTCTCTGTTCTGCATCTGTAGAAGTATCATCTCTGGAAGAACCAATCCTA
                      ____________________________________________________________
consensus TCCAGCATTCCTCTCTGTTCTGCATCTGTAGAAGTATCATCTCTGGAAGAACCAATCCTA
 
. : . : . : . : . : . :
rJMSF002A01- AAAATCTTTCTGTAAAGCCACATGATACTCATGAAAAAAGCTGCAAATGCCTTGACAACA
                      ____________________________________________________________
consensus AAAATCTTTCTGTAAAGCCACATGATACTCATGAAAAAAGCTGCAAATGCCTTGACAACA
 
. : . : . : . : . : . :
rJMSF002A01- AAAAGCAAAACACGAGAACAATAATTTTCTGCTAAATAATGATCTTCCACAAAAAACCCA
                      ____________________________________________________________
consensus AAAAGCAAAACACGAGAACAATAATTTTCTGCTAAATAATGATCTTCCACAAAAAACCCA
 
. : . : . : . : . : . :
rJMSF002A01- GTGCCTTTCTTGCCCCAGTCACTTGATCTCCCCTGGAAAGAACCCCCAACCCAATTTCTG
                      ____________________________________________________________
consensus GTGCCTTTCTTGCCCCAGTCACTTGATCTCCCCTGGAAAGAACCCCCAACCCAATTTCTG
 
. : . : . : . : . : . :
rJMSF002A01- TTCTCTAGCCAATCCTGCCCGTATATCCATCCACTATCAGACTGAACCTTTCCTTTCAAT
                      ____________________________________________________________
consensus TTCTCTAGCCAATCCTGCCCGTATATCCATCCACTATCAGACTGAACCTTTCCTTTCAAT
 
. : . : . : . : . : . :
rJMSF002A01- ATCTTCCCACTTTTTCCTACCAAGTCATTCAAAATCCTAGAATTTGAAAGGTCAAATCCT
                      ____________________________________________________________
consensus ATCTTCCCACTTTTTCCTACCAAGTCATTCAAAATCCTAGAATTTGAAAGGTCAAATCCT
 
. : . : . : . : . : . :
rJMSF002A01- TGAGGAACAGGTAAGTCCAAGACTGGTCTCTTAGAGATGTGCCCACAATATGAGCACATA
                      ____________________________________________________________
consensus TGAGGAACAGGTAAGTCCAAGACTGGTCTCTTAGAGATGTGCCCACAATATGAGCACATA
 
. : . : . : . : . : . :
rJMSF002A01- AACTTCCCACCACCAGGATTCTGATCCCTGTATGGAGTGAAGCAATTTCTACATCTCTTT
JMFS068A08+ TGATCCCTGTATGGAGTGAAGCAATTTCTACATCTCTTT
                      ____________________________________________________________
consensus AACTTCCCACCACCAGGATTCTGATCCCTGTATGGAGTGAAGCAATTTCTACATCTCTTT
 
. : . : . : . : . : . :
rJMSF002A01- GTGGNTGTTTTCCTCAACTTCTGCATTTCAATCGCTTCAACCCTCTTCT
JMFS068A08+ GTGGCTGTTTTCCTCAACTTCTGCATTTCAATCGCTTCAACCCTCTTCTTCTCCCTAAGC
JMSF040A23+ TAAGC
                      ____________________________________________________________
consensus GTGGCTGTTTTCCTCAACTTCTGCATTTCAATCGCTTCAACCCTCTTCTTCTCCCTAAGC
 
. : . : . : . : . : . :
JMFS068A08+ ATAGCACTTCTCTTTGCCCGCCAAGCCGACAACCAAGGCATCAAAATCTCATACCAGAAA
JMSF040A23+ ATAGCACTTCTCTTTGCCCGCCAAGCCGACAACCAAGGCATCAAAATCTCATNCCAGAAA
                      ____________________________________________________________
consensus ATAGCACTTCTCTTTGCCCGCCAAGCCGACAACCAAGGCATCAAAATCTCATACCAGAAA
 
. : . : . : . : . : . :
JMFS068A08+ AGTGTCACCAAGAGTACAAAAACACAGGCCAGTCTCGGAGAAGTGATTTCAAATCTAAAA
JMSF040A23+ AGTGTCACCAAGAGTACAAAAACACAGGCCAGTCTCGGAGAAGTGATTTCAAATCTAAAA
                      ____________________________________________________________
consensus AGTGTCACCAAGAGTACAAAAACACAGGCCAGTCTCGGAGAAGTGATTTCAAATCTAAAA
 
. : . : . : . : . : . :
JMFS068A08+ GCAGGCGGCAATGCCTGTGATAGTGCCCATAGACCAATCAATGGAATCACTAACCACGGC
JMSF040A23+ GCAGGCGGCAATGCCTGTGATAGTGCCCATAGACCAATCAATGGAATCACTAACCACGGC
                      ____________________________________________________________
consensus GCAGGCGGCAATGCCTGTGATAGTGCCCATAGACCAATCAATGGAATCACTAACCACGGC
 
. : . : . : . : . : . :
JMFS068A08+ AACATAGCAGCAACCCTCCGAGACCATTTCTGAATCACACAAAGCATACACATTATCCCG
JMSF040A23+ AACATAGCAGCAACCCTCCGAGACCATTTCTGAATCACACAAAGCATACACATTATCCCG
                      ____________________________________________________________
consensus AACATAGCAGCAACCCTCCGAGACCATTTCTGAATCACACAAAGCATACACATTATCCCG
 
. : . : . : . : . : . :
JMFS068A08+ TAACCAACCCTACAATCCCCCAACCCGAGTAATTAGAGAAATAAAAACCAATCAGAACCC
JMSF040A23+ TAACCAACCNTACAATCCCCCAACCCGAGTANTTAGAGAAATAAAAACCAATCAGAACCC
                      ____________________________________________________________
consensus TAACCAACCCTACAATCCCCCAACCCGAGTAATTAGAGAAATAAAAACCAATCAGAACCC
 
. : . : . : . : . : . :
JMFS068A08+ AGCTGTAAATATCAGAAATTAGTTAAACCCCTATATTTATTATCTACAGCTCATGAAAAC
JMSF040A23+ AGCTGTAAATATCAGAAATTAGTTAAACCCCTATATTTATTATCTACAGCTCATGAAAAC
                      ____________________________________________________________
consensus AGCTGTAAATATCAGAAATTAGTTAAACCCCTATATTTATTATCTACAGCTCATGAAAAC
 
. : . : . : . : . : . :
JMFS068A08+ CTAACCCCCTGCAATCCCTTTCTCTTCCCGAGCAAAACCAGTTACATCTCCAATCACAAA
JMSF040A23+ CTAACCCCCTGCAATCCCTTTCTCTTCCCGAGCAAAACCAGTTACATCTCCAATCACAAA
JMSF002A01+ CAGTTACATCTCCAATCACAAA
                      ____________________________________________________________
consensus CTAACCCCCTGCAATCCCTTTCTCTTCCCGAGCAAAACCAGTTACATCTCCAATCACAAA
 
. : . : . : . : . : . :
JMFS068A08+ TTCATCGGCGGCGGCGGTCGGAACGGTGAGGTTCGTCGGTGAAATGAATGCTACACCGGT
JMSF040A23+ TTCATCGGCGGCGGCGGTCGGAACGGTGAGGTTCGTCGGTGAAATGAATGCTACACCGGT
JMSF002A01+ TTCATCGGCGGCGGCGGTCGGAACGGTGAGGTTCGTCGGTGAAATGAATGCTACACCGGT
                      ____________________________________________________________
consensus TTCATCGGCGGCGGCGGTCGGAACGGTGAGGTTCGTCGGTGAAATGAATGCTACACCGGT
 
. : . : . : . : . : . :
JMFS068A08+ ATACGACTATGGTAACACAGTAACAACGAAAAGA
JMSF040A23+ ATACGACTATGGTAACACAGTAACAACGAAAAGAGTAAAAGGGAAATNTGCAAAAATACC
JMSF002A01+ ATACGACTATGGTAACACAGTAACAACGAAAAGAGTAAAAGGGAAATCTGCAAAAATACC
                      ____________________________________________________________
consensus ATACGACTATGGTAACACAGTAACAACGAAAAGAGTAAAAGGGAAATCTGCAAAAATACC