clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFS151C04 | Sequence | 597 | 000545 (3) | ref|XP_009800989.1| | 5e-72 | PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 1-like [Nicoti | |||||
JMSF001K11 | Sequence | 289 | 000545 (3) | ref|XP_009624222.1| | 3e-16 | PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 1-like [Nicoti | 728 | 001262 (3) | ref|XP_009800989.1| | 3e-19 | PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 1-like [Nicoti |
JMSF001L11 | Sequence | 388 | 000545 (3) | ref|XP_009800989.1| | 1e-30 | PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 1-like [Nicoti | 725 | 001262 (3) | ref|XP_009800989.1| | 1e-18 | PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 1-like [Nicoti |
This contig is upended
. : . : . : . : . : . :
JMFS151C04+ CTAGCAAATATCCTAAAGCCAGAATGCTCA
____________________________________________________________
consensus CTAGCAAATATCCTAAAGCCAGAATGCTCA
. : . : . : . : . : . :
JMFS151C04+ ACCATAGCCAAAGGATAGCCATGTAATATGATCATGCGAGCAAGATCAAGCCGACTCCTT
____________________________________________________________
consensus ACCATAGCCAAAGGATAGCCATGTAATATGATCATGCGAGCAAGATCAAGCCGACTCCTT
. : . : . : . : . : . :
JMFS151C04+ CTGTTATCAAAATTAAAACTTCCACCTTCAATCCCATCTTTTACGCAGTTTTGATCTAGC
____________________________________________________________
consensus CTGTTATCAAAATTAAAACTTCCACCTTCAATCCCATCTTTTACGCAGTTTTGATCTAGC
. : . : . : . : . : . :
JMFS151C04+ TTAGTTCTTACAATGCTGACTGCTTCATCATTTCCGTGCTCTTGATCAAAACTAAAATTT
____________________________________________________________
consensus TTAGTTCTTACAATGCTGACTGCTTCATCATTTCCGTGCTCTTGATCAAAACTAAAATTT
. : . : . : . : . : . :
JMFS151C04+ GCAACAGCAAAAGTTGTTTCCTTTCTCTTGCCCCTCGTTAGCAACTGGCTTATGTCTTGG
JMSF001L11+ CCTCGTTAGCAACTGGCTTATGTCTTGG
____________________________________________________________
consensus GCAACAGCAAAAGTTGTTTCCTTTCTCTTGCCCCTCGTTAGCAACTGGCTTATGTCTTGG
. : . : . : . : . : . :
JMFS151C04+ TTAGATCTTCTTCTACATCTGATTAAATGATTCCTCAAATGCGAAGTTCCACTGGTACTT
JMSF001L11+ TTAGATCTTCTTCTACATCTGATTAAATGATTCCTCAAATGCGAAGTTCCACTGGTACTT
____________________________________________________________
consensus TTAGATCTTCTTCTACATCTGATTAAATGATTCCTCAAATGCGAAGTTCCACTGGTACTT
. : . : . : . : . : . :
JMFS151C04+ GACCCACTAAGTTTCCTATTACAGTGCCTACAAATAGCTATGAAAGTATCACCTTTCCTG
JMSF001K11+ TTTCCTATTACAGTGCCTACAAATAGCTATGAAAGTATCACCTTTCCTG
JMSF001L11+ GACCCACTAAGTTTCCTATTACAGTGCCTACAAATAGCTATGAAAGTATCACCTTTCCTG
____________________________________________________________
consensus GACCCACTAAGTTTCCTATTACAGTGCCTACAAATAGCTATGAAAGTATCACCTTTCCTG
. : . : . : . : . : . :
JMFS151C04+ ACCCTATCAAAATCATTCCAAACGACTGATTTCAGTCTACTAGAATTGACTATGACCGAC
JMSF001K11+ ACCCTATCAAAATCATTCCAAACGACTGATTTCAGTCTACTAGAATTGACTATGACCGAC
JMSF001L11+ ACCCTATCAAAATCATTCCAAACGACTGATTTCAGTCTACTAGAATTGACTATGACCGAC
____________________________________________________________
consensus ACCCTATCAAAATCATTCCAAACGACTGATTTCAGTCTACTAGAATTGACTATGACCGAC
. : . : . : . : . : . :
JMFS151C04+ TCATCTGCTATCTCCATTGCTTTCCTGATACTCTACCAACACCTGGGTTAGGGTTTGTTC
JMSF001K11+ TCATCTGCTATCTCCATTGCTTTCCTGATACTCTACCAACACCTGGGTTAGGGTTTGTTC
JMSF001L11+ TCATCTGCTATCTCCATTGCTTTCCTGATACTCTACCAACACCTGGGTTAGGGTTTGTTC
____________________________________________________________
consensus TCATCTGCTATCTCCATTGCTTTCCTGATACTCTACCAACACCTGGGTTAGGGTTTGTTC
. : . : . : . : . : . :
JMFS151C04+ CACAGCTGTTCAGGCATGTGTGTAGTAAATACGAGTGAGTAAGTGTTTGTGTGAGCGAGA
JMSF001K11+ CACAGCTGTTCAGGCATGTGTGTAGTAAATACGAGTGAGTAAGTGTTTGTGTGAGCGAGA
JMSF001L11+ CACAGCTGTTCAGGCATGTGTGTAGTAAATACGAGTGAGTAAGTGTTTGTGTGAGCGAGA
____________________________________________________________
consensus CACAGCTGTTCAGGCATGTGTGTAGTAAATACGAGTGAGTAAGTGTTTGTGTGAGCGAGA
. : . : . : . : . : . :
JMFS151C04+ AAGAGCGAGCGAGCGAGCGAGAGAGAA
JMSF001K11+ AAGAGCGAGCGAGCGAGCGAGAGAGAAACGGTTTGGTTAAGCGAGATATGTGTCAGCGTC
JMSF001L11+ AAGAGCGAGCGAGCGAGCGAGAGAGAAACGGTTTGGTTAAGCGAGATATGTGTCAGCGTC
____________________________________________________________
consensus AAGAGCGAGCGAGCGAGCGAGAGAGAAACGGTTTGGTTAAGCGAGATATGTGTCAGCGTC