Contig 000538:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF013F16Sequence527000538 (7)emb|CDP07208.1|5e-110unnamed protein product [Coffea canephora]763013658 (5)ref|XP_002516768.1|4e-60rnase l inhibitor, putative [Ricinus communis] gb|EEF45666.1| rnase l inhibitor,
JMSF001B20Sequence291000538 (7)ref|XP_011082187.1|9e-28PREDICTED: ABC transporter E family member 2 [Sesamum indicum]750021346
JMSF004E05Sequence416000538 (7)ref|XP_009770922.1|1e-68PREDICTED: ABC transporter E family member 2 [Nicotiana sylvestris] ref|XP_00977283013658 (5)
JMSF005F22Sequence347000538 (7)emb|CDP07208.1|2e-48unnamed protein product [Coffea canephora]456013658 (5)
JMSF021A05Sequence711000538 (7)ref|XP_008377063.1|4e-122PREDICTED: ABC transporter E family member 2-like [Malus domestica] ref|XP_00837796013658 (5)ref|XP_002516768.1|2e-75rnase l inhibitor, putative [Ricinus communis] gb|EEF45666.1| rnase l inhibitor,
JMSF027I02Sequence655000538 (7)emb|CDP07208.1|2e-131unnamed protein product [Coffea canephora]762013658 (5)ref|XP_002516768.1|9e-64rnase l inhibitor, putative [Ricinus communis] gb|EEF45666.1| rnase l inhibitor,
JMSF046D18Sequence758000538 (7)emb|CDP07208.1|1e-148unnamed protein product [Coffea canephora]777020521ref|XP_008374098.1|6e-87PREDICTED: ABC transporter E family member 2-like isoform X1 [Malus domestica]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF021A05+ ACAAA
JMSF046D18+ ACCAGATAAATCTCCCAACATTGTGGTCCAAAACCTGATTCAACTCGAGATCAACACAAA
                      ____________________________________________________________
consensus ACCAGATAAATCTCCCAACATTGTGGTCCAAAACCTGATTCAACTCGAGATCAACACAAA
 
. : . : . : . : . : . :
JMSF021A05+ GTTCTTCTTTCATATCTCTCTCGTCCTTTTGATCAAGCACTTGCCCCACATTCCCTTGGA
JMSF027I02+ GATCAAGCACTTGCCCCACATTCCCTTGGA
JMSF046D18+ GTTCTTCTTTCATATCTCTCTCGTCCTTTTGATCAAGCACTTGCCCCACATTCCCTTGGA
                      ____________________________________________________________
consensus GTTCTTCTTTCATATCTCTCTCGTCCTTTTGATCAAGCACTTGCCCCACATTCCCTTGGA
 
. : . : . : . : . : . :
JMSF021A05+ CAGCCTTGGGAATATGGTCAACATACTGAGGCTTGATTATAGCTTTTAAATTATCTTCCA
JMFF013F16+ CTTCCA
JMSF027I02+ CAGCCTTGGGAATATGGTCAACATACTGAGGCTTGATTATAGCTTTTAAATTATCTTCCA
JMSF046D18+ CAGCCTTGGGAATATGGTCAACATACTGAGGCTTGATTATAGCTTTTAAATTATCTTCCA
                      ____________________________________________________________
consensus CAGCCTTGGGAATATGGTCAACATACTGAGGCTTGATTATAGCTTTTAAATTATCTTCCA
 
. : . : . : . : . : . :
JMSF021A05+ GAATACGAGTGAAGTAATTCTGCAATTCAGAACCTCTGAAGTAAGTCAATATCTCTTGCC
JMFF013F16+ GAATACGAGTGAAGTAATTCTGCAATTCAGAACCTCTGAAGTAAGTCAATATCTCTTGCC
JMSF027I02+ GAATACGAGTGAAGTAATTCTGCAATTCAGAACCTCTGAAGTAAGTCAATATCTCTTGCC
JMSF046D18+ GAATACGAGTGAAGTAATTCTGCAATTCAGAACCTCTGAAGTAAGTCAATATCTCTTGCC
                      ____________________________________________________________
consensus GAATACGAGTGAAGTAATTCTGCAATTCAGAACCTCTGAAGTAAGTCAATATCTCTTGCC
 
. : . : . : . : . : . :
JMSF021A05+ AGTCGGGAGGGTTTTTGAAGCGTCCCAAATTAGGCTTTAGTTTCCCAGCTAATACTTTAA
JMFF013F16+ AGTCGGGAGGGTTTTTGAAGCGTCCCAAATTAGGCTTTAGTTTCCCAGCTAATACTTTAA
JMSF027I02+ AGTCGGGAGGGTTTTTGAAGCGTCCCAAATTAGGCTTTAGTTTCCCAGCTAATACTTTAA
JMSF046D18+ AGTCGGGAGGGTTTTTGAAGCGTCCCAAATTAGGCTTTAGTTTCCCAGCTAATACTTTAA
                      ____________________________________________________________
consensus AGTCGGGAGGGTTTTTGAAGCGTCCCAAATTAGGCTTTAGTTTCCCAGCTAATACTTTAA
 
. : . : . : . : . : . :
JMSF021A05+ GAGCAGTTGATTTTCCAATACCATTTGTTCCAACCAGGCCAAGAACTTGTCCTGGTCTTG
JMFF013F16+ GAGCAGTTGATTTTCCAATACCATTTGTTCCAACCAGGCCAAGAACTTGTCCTGGTCTTG
JMSF027I02+ GAGCAGTTGATTTTCCAATACCATTTGTTCCAACCAGGCCAAGAACTTGTCCTGGTCTTG
JMSF004E05+ CAGGCCAAGAACTTGTCCTGGTCTTG
JMSF046D18+ GAGCAGTTGATTTTCCAATACCATTTGTTCCAACCAGGCCAAGAACTTGTCCTGGTCTTG
                      ____________________________________________________________
consensus GAGCAGTTGATTTTCCAATACCATTTGTTCCAACCAGGCCAAGAACTTGTCCTGGTCTTG
 
. : . : . : . : . : . :
JMSF021A05+ GGACTGGCAACCTATGTAATTTAAATGTGTTAGGACCATAACGATGTGTTGTATCCTTGT
JMFF013F16+ GGACTGGCAACCTATGTAATTTAAATGTGTTAGGACCATAACGATGTGTTGTATCCTTGT
JMSF005F22+ T
JMSF027I02+ GGACTGGCAACCTATGTAATTTAAATGTGTTAGGACCATAACGATGTGTTGTATCCTTGT
JMSF004E05+ GGACTGGCAACCTATGTAATTTAAATGTGTTAGGACCATAACGATGTGTTGTATCCTTGT
JMSF046D18+ GGACTGGCAACCTATGTAATTTAAATGTGTTAGGACCATAACGATGTGTTGTATCCTTGT
                      ____________________________________________________________
consensus GGACTGGCAACCTATGTAATTTAAATGTGTTAGGACCATAACGATGTGTTGTATCCTTGT
 
. : . : . : . : . : . :
JMSF021A05+ CCAAGTCCTTTGGCAGATTGATGATCTGAATGGCCTCAAATGGGCATTTCTTTACACAAA
JMFF013F16+ CCAAGTCCTTTGGCAGATTGATGATCTGAATGGCCTCAAATGGGCATTTCTTTACACAAA
JMSF005F22+ CCAAGTCCTTTGGCAGATTGATGATCTGAATGGCCTCAAATGGGCATTTCTTTACACAAA
JMSF027I02+ CCAAGTCCTTTGGCAGATTGATGATCTGAATGGCCTCAAATGGGCATTTCTTTACACAAA
JMSF004E05+ CCAAGTCCTTTGGCAGATTGATGATCTGAATGGCCTCAAATGGGCATTTCTTTACACAAA
JMSF046D18+ CCAAGTCCTTTGGCAGATTGATGATCTGAATGGCCTCAAATGGGCATTTCTTTACACAAA
                      ____________________________________________________________
consensus CCAAGTCCTTTGGCAGATTGATGATCTGAATGGCCTCAAATGGGCATTTCTTTACACAAA
 
. : . : . : . : . : . :
JMSF021A05+ TACCACATCCAATGCACAGCTCCTCTGAGATGAAGGCAATCTTGGCTGCAGGAGTCACCT
JMFF013F16+ TACCACATCCAATGCACAGCTCCTCTGAGATGAAGGCAATCTTGGCTGCAGGAGTCACCT
JMSF005F22+ TACCACATCCAATGCACAGCTCCTCTGAGATGAAGGCAATCTTGGCTGCAGGAGTCACCT
JMSF027I02+ TACCACATCCAATGCACAGCTCCTCTGAGATGAAGGCAATCTTGGCTGCAGGAGTCACCT
JMSF004E05+ TACCACATCCAATGCACAGCTCCTCTGAGATGAAGGCAATCTTGGCTGCAGGAGTCACCT
JMSF046D18+ TACCACATCCAATGCACAGCTCCTCTGAGATGAAGGCAATCTTGGCTGCAGGAGTCACCT
JMSF001B20+ CAATGCACAGCTCNTNTGAGATGAAGGCAATCTNGGCTGCAGGAGTCACCT
                      ____________________________________________________________
consensus TACCACATCCAATGCACAGCTCCTCTGAGATGAAGGCAATCTTGGCTGCAGGAGTCACCT
 
. : . : . : . : . : . :
JMSF021A05+ CAATACAAAGTTTGCCAGTTTTAACAACGGGGCAG-TCTTCTTGCATTCCTGACGGCACT
JMFF013F16+ CAATACAAAGTTTGCCAGTTTTAACAACGGGGCAGCTCTTCTTGCATTCCTGACGGCACT
JMSF005F22+ CAATACAAAGTTTGCCAGTTTTAACAACGGGGCAGCTCTTCTTGCATTCCTGACGGCACT
JMSF027I02+ CAATACAAAGTTTGCCAGTTTTAACAACGGGGCAGCTCTTCTTGCATTCCTGACGGCACT
JMSF004E05+ CAATACAAAGTTTGCCAGTTTTAACAACGGGGCAGCTCTTCTTGCATTCCTGACGGCACT
JMSF046D18+ CAATACAAAGTTTGCCAGTTTTAACAACGGGGCAGCTCTTCTTGCATTCCTGACGGCACT
JMSF001B20+ CAATACAAAGTTTGCCAGTTTTAACAACGGGGCAGCTCTTCTTGCATTCCTGACGGCACT
                      ____________________________________________________________
consensus CAATACAAAGTTTGCCAGTTTTAACAACGGGGCAGCTCTTCTTGCATTCCTGACGGCACT
 
. : . : . : . : . : . :
JMSF021A05+ TTTTTGGTTTGCACTTATCAGAGCTGACTATAGCAATACGAGTCAATCTCTGATCCGACA
JMFF013F16+ TTTTTGGTTTGCACTTATCAGAGCTGACTATAGCAATACGAGTCAATCTCTGATCCGACA
JMSF005F22+ TTTTTGGTTTGCACTTATCAGAGCTGACTATAGCAATACGAGTCAATCTCTGATCCGACA
JMSF027I02+ TTTTTGGTTTGCACTTATCAGAGCTGACTATAGCAATACGAGTCAATCTCTGATCCGACA
JMSF004E05+ TTTTTGGTTTGCACTTATCAGAGCTGACTATAGCAATACGAGTCAATCTCTGATCCGACA
JMSF046D18+ TTTTTGGTTTGCACTTATCAGAGCTGACTATAGCAATACGAGTCAATCTCTGATCCGACA
JMSF001B20+ TTTTTGGTTTGCACTTATCAGAGCTGACTATAGCAATACGAGTCAATCTCTGATCCGACA
                      ____________________________________________________________
consensus TTTTTGGTTTGCACTTATCAGAGCTGACTATAGCAATACGAGTCAATCTCTGATCCGACA
 
. : . : . : . : . : . :
JMSF021A05+ TTTCTCTCTTCACCAATCTGTAGCAGAGATTTCGATTGAAGAAGAGTAGATTGTGGAGCG
JMFF013F16+ TTTCTCTCTTCACCAATCTGT
JMSF005F22+ TTTCTCTCT
JMSF027I02+ TTTCTCTCTTCACCAATCTGTAGCAGAGATTTCGATTGAAGAAGAGTAGATTGTGGAGCG
JMSF004E05+ TTTCTCTCTTCACCAATCTGTAGCAGAGATTTCGATTGAAGAAGAGTAGATTGTGGAGCG
JMSF046D18+ TTTCTCTCTTCACCAATCTGTAGCAGAGATTTCGATTGAAGAAGAGTAGATTGTGGAGCG
JMSF001B20+ TTTCTCTCTTCACCAATCTGTAGCAGAGATTTCGATTGAAGAAGAGTAGATTGTGGAGCG
                      ____________________________________________________________
consensus TTTCTCTCTTCACCAATCTGTAGCAGAGATTTCGATTGAAGAAGAGTAGATTGTGGAGCG
 
. : . : . : . : . : . :
JMSF021A05+ TGTGGTGGACGCAAGACAGGGAATGGAC
JMSF027I02+ TGTGGTGGACGCAAGACAGGGAA
JMSF004E05+ TGTGGTGGACGCAAGACAGGGAATGGAC
JMSF046D18+ TGTGGTGGACGCAAGACAGGGAATGGACTGT
JMSF001B20+ TGTGGTGGACGCAAGACAGGGAATGGACTGTGAATACGCCCAGCAAGCTAGGGTTACTTC
                      ____________________________________________________________
consensus TGTGGTGGACGCAAGACAGGGAATGGACTGTGAATACGCCCAGCAAGCTAGGGTTACTTC