Contig 000528:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF038C18Sequence544000528 (3)ref|XP_006349881.1|3e-62PREDICTED: chitinase-like protein 2-like [Solanum tuberosum]
JMFS159E02Sequence463000528 (3)ref|XP_009768837.1|7e-26PREDICTED: chitinase-like protein 2 [Nicotiana sylvestris]
JMSF011N15Sequence236000528 (3)ref|XP_004247978.1|7e-05PREDICTED: chitinase-like protein 1 [Solanum lycopersicum]796011457 (50)gb|AHX74092.1|1e-87chitodextrinase [Eucommia ulmoides]

Alignment

This contig is upended


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JMFF038C18+                                                   CCTTGTTATAACATAGACCC
                      ____________________________________________________________
consensus                                                     CCTTGTTATAACATAGACCC
 
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JMFF038C18+           CAAGCCAACGGCCCACCAGTAGCCACACCATAACCACATGAAGTTTTGCTGCCGACATGG
                      ____________________________________________________________
consensus             CAAGCCAACGGCCCACCAGTAGCCACACCATAACCACATGAAGTTTTGCTGCCGACATGG
 
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JMFF038C18+           CCAAGGAAAGCGGCGAGCTCATTCATCTGCATCTTCTTGCCGCCGGTGGTGGCGAATCCT
                      ____________________________________________________________
consensus             CCAAGGAAAGCGGCGAGCTCATTCATCTGCATCTTCTTGCCGCCGGTGGTGGCGAATCCT
 
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JMFF038C18+           AGTGGCTGGAAGTCGGCGGAGGCGAGGATAAATGAGCGGTAATCCCAGAAGCCGACGGCG
JMFS159E02+                            GGAGGCGAGGATAAATGAGCGGTAATCCCAGAAGCCGACGGCG
                      ____________________________________________________________
consensus             AGTGGCTGGAAGTCGGCGGAGGCGAGGATAAATGAGCGGTAATCCCAGAAGCCGACGGCG
 
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JMFF038C18+           TGAGCGATGGGGGAATTCCTCTTGGCGAAGAGATTCTCAAACTGGTAGGTATCGAAAATG
JMFS159E02+           TGAGCGATGGGGGAATTCCTCTTGGCGAAGAGATTCTCAAACTGGTAGGTATCGAAAATG
                      ____________________________________________________________
consensus             TGAGCGATGGGGGAATTCCTCTTGGCGAAGAGATTCTCAAACTGGTAGGTATCGAAAATG
 
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JMFF038C18+           TCGGTAATGGTCAAATTACAGCAGAACTTGGAGAGCTTATTACACTCCCACCCTTTGGCG
JMSF011N15+           TCGGTAATGGTCAAATTACAGCAGAACTTGGAGAGCTTATTACACTCCCACCCTTTGGCG
JMFS159E02+           TCGGTAATGGTCAAATTACAGCAGAACTTGGAGAGCTTATTACACTCCCACCCTTTGGCG
                      ____________________________________________________________
consensus             TCGGTAATGGTCAAATTACAGCAGAACTTGGAGAGCTTATTACACTCCCACCCTTTGGCG
 
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JMFF038C18+           CACATCTTCGTACCCTTCACCTTCTTCACCACTGTCGGCGGCGTCTTCGACACCTCTCCG
JMSF011N15+           CACATCTTCGTACCCTTCACCTTCTTCACCACTGTCGGCGGCGTCTTCGACACCTCTCCG
JMFS159E02+           CACATCTTCGTACCCTTCACCTTCTTCACCACTGTCGGCGGCGTCTTCGACACCTCTCCG
                      ____________________________________________________________
consensus             CACATCTTCGTACCCTTCACCTTCTTCACCACTGTCGGCGGCGTCTTCGACACCTCTCCG
 
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JMFF038C18+           TCTCCGTTCACCGTCGTCACGGCAGCCGCCACGAGCATTACCACCAATGCCACCAATTTC
JMSF011N15+           TCTCCGTTCACCGTCGTCACGGCAGCCGCCACGAGCATTACCACCAATGCCACCAATTTC
JMFS159E02+           TCTCCGTTCACCGTCGTCACGGCAGCCGCCACGAGCATTACCACCAATGCCACCAATTTC
                      ____________________________________________________________
consensus             TCTCCGTTCACCGTCGTCACGGCAGCCGCCACGAGCATTACCACCAATGCCACCAATTTC
 
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JMFF038C18+           AAAGAACCCTCCATTTCTTTTTCTCTTCTCTTCAATTTCCCTTGTTGTTCCCTGCGAATG
JMSF011N15+           AAAGAACCCTCCATTTCTTTTTCTCTTCTCTTCAATTTCCCTTGTTGTTCCCTGC     
JMFS159E02+           AAAGAACCCTCCATTTCTTTTTCTCTTCTCTTCAATTTCCCTTGTTGTTCCCTGCGAATG
                      ____________________________________________________________
consensus             AAAGAACCCTCCATTTCTTTTTCTCTTCTCTTCAATTTCCCTTGTTGTTCCCTGCGAATG
 
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JMFF038C18+           AGATGAAAAACCCGGTGATTATTTAAGGAGAATGAAACGA                    
JMFS159E02+           AGATGAAAAACCCGGTGATTATTTAAGGAGAATGAAACGAAAGTGAAGTGAAAAGAAAGC
                      ____________________________________________________________
consensus             AGATGAAAAACCCGGTGATTATTTAAGGAGAATGAAACGAAAGTGAAGTGAAAAGAAAGC
 
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JMFS159E02+           CTACTGAATGATTTGAGATCTGGGTCAGGAAGATGAATTGTGCGGGGTTTTTCCTACCTT
                      ____________________________________________________________
consensus             CTACTGAATGATTTGAGATCTGGGTCAGGAAGATGAATTGTGCGGGGTTTTTCCTACCTT