Contig 000515:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF029A10Sequence466000515 (6)ref|XP_006364991.1|135PREDICTED: copper-transporting ATPase RAN1-like [Solanum tuberosum]611016981ref|XP_009602510.1|4e-104PREDICTED: copper-transporting ATPase RAN1-like isoform X2 [Nicotiana tomentosi
JMFS012H07Sequence632000515 (6)ref|XP_009602509.1|6e-104PREDICTED: copper-transporting ATPase RAN1-like isoform X1 [Nicotiana tomentosi
JMFS075G05Sequence624000515 (6)ref|XP_004233259.1|7e-67PREDICTED: copper-transporting ATPase RAN1 [Solanum lycopersicum]
JMFS132D01Sequence612000515 (6)ref|XP_004233259.1|1e-63PREDICTED: copper-transporting ATPase RAN1 [Solanum lycopersicum]
JMFS145D01Sequence626000515 (6)ref|XP_004233259.1|5e-59PREDICTED: copper-transporting ATPase RAN1 [Solanum lycopersicum]
JMFS165H12Sequence604000515 (6)ref|XP_004233259.1|7e-63PREDICTED: copper-transporting ATPase RAN1 [Solanum lycopersicum]

Alignment

This contig is upended


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JMFS012H07+              AACATGCTTGAGGATTCTTCAATATCTCTAGAAGCCATTCTTGTATAAGGATTCTTA
                      ____________________________________________________________
consensus                AACATGCTTGAGGATTCTTCAATATCTCTAGAAGCCATTCTTGTATAAGGATTCTTA
 
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JMFS012H07+           ACATGTAATGTAAATTTGCCACCACTTCCCCCATTAATGCCATCAACTACAGATCTTGAA
                      ____________________________________________________________
consensus             ACATGTAATGTAAATTTGCCACCACTTCCCCCATTAATGCCATCAACTACAGATCTTGAA
 
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JMFS012H07+           CCAAGAACCTCAGGATCAAAGACAACTTCTAGCTCTCTTGATGTGGGGTTATAAAAAAAG
                      ____________________________________________________________
consensus             CCAAGAACCTCAGGATCAAAGACAACTTCTAGCTCTCTTGATGTGGGGTTATAAAAAAAG
 
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JMFS012H07+           TGTCTCACTCCGTGCAACTTAGACAAAATGCCTTCTAACAATTGCATATCCATTTGACCA
                      ____________________________________________________________
consensus             TGTCTCACTCCGTGCAACTTAGACAAAATGCCTTCTAACAATTGCATATCCATTTGACCA
 
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JMFS012H07+           GAAATTCCAACAACTCCTAGTATGATTTTATCCTGTGCACTACTCTGCATCAATGAACCT
                      ____________________________________________________________
consensus             GAAATTCCAACAACTCCTAGTATGATTTTATCCTGTGCACTACTCTGCATCAATGAACCT
 
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JMFS012H07+           TCAAAACCAGCATCTTCAATTGCATTGACAATGTCATTTTTACTGATAACAGTTGGATCA
                      ____________________________________________________________
consensus             TCAAAACCAGCATCTTCAATTGCATTGACAATGTCATTTTTACTGATAACAGTTGGATCA
 
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JMFS012H07+           TATTCAACCTCCCCCACTGATGTAGCCAAAGCAACCACTGCTCTTTTTACACCTGGAAGA
                      ____________________________________________________________
consensus             TATTCAACCTCCCCCACTGATGTAGCCAAAGCAACCACTGCTCTTTTTACACCTGGAAGA
 
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JMFS012H07+           CTACTCAGGATACCTTCAACAGAGTTTACACATGCTGCACATGTCATACCACCTATCATG
JMFS075G05+                 AGGATACCTTCAACAGAGTTTACACATGCTGCACATGTCATACCACCTATCATG
JMFS165H12+                                     TACACATGCTGCACATGTCATACCACCTATCATG
JMFS132D01+                                     TACACATGCTGCACATGTCATACCACCTATCATG
JMFS145D01+                                             CTGCACATGTCATACCACCTATCATG
                      ____________________________________________________________
consensus             CTACTCAGGATACCTTCAACAGAGTTTACACATGCTGCACATGTCATACCACCTATCATG
 
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JMFS012H07+           AACTGTCCGGACACTGTTCCATTTGTGTTGGCATGAGATGCATTGGGTTCAGCTAGAACC
JMFS075G05+           AACTGTCCGGACACTGTTCCATTTGTGTTGGCATGAGATGCATTGGGTTCAGCTAGAACC
JMFS165H12+           AACTGTCCGGACACTGTTCCATTTGTGTTGGCATGAGATGCATTGGGTTCAGCTAGAACC
JMFS132D01+           AACTGTCCGGACACTGTTCCATTTGTGTTGGCATGAGATGCATTGGGTTCAGCTAGAACC
JMFS145D01+           AAATGTCCGGACACTGTTCCATTTGTGTTGGCATGAGATGCATTGGGTTCAGCTAGAACC
                      ____________________________________________________________
consensus             AACTGTCCGGACACTGTTCCATTTGTGTTGGCATGAGATGCATTGGGTTCAGCTAGAACC
 
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JMFS012H07+           TCTGCCTCAAATCCTGCATCTTCTATGGCATTCTCAATATCTTTATCCTTGACCACGTGA
JMFS075G05+           TCTGCCTCAAATCCTGCATCTTCTATGGCATTCTCAATATCTTTATCCTTGACCACGTGA
JMFS165H12+           TCTGCCTCAAATCCTGCATCTTCTATGGCATTCTCAATATCTTTATCCTTGACCACGTGA
JMFS132D01+           TCTGCCTCAAATCCTGCATCTTCTATGGCATTCTCAATATCTTTATCCTTGACCACGTGA
JMFF029A10+                                                                   GTGA
JMFS145D01+           TCTGCCTCAAATCCTGCATCTTCTATGGCATTCTCAATATCTTTATCCTTGACCACGTGA
                      ____________________________________________________________
consensus             TCTGCCTCAAATCCTGCATCTTCTATGGCATTCTCAATATCTTTATCCTTGACCACGTGA
 
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JMFS012H07+           GGATCGAAAACCACATCAGCTT                                      
JMFS075G05+           GGATCGAAAACCACATCAGCTTTATTCTGAAGAAGAGCAACGGAAGCCTTAACGACTCCA
JMFS165H12+           GGATCGAAAACCACATCAGCTTTATTCTGAAGAAGAGCAACGGAAGCCTTAACGACTCCA
JMFS132D01+           GGATCGAAAACCACATCAGCTTTATTCTGAAGAAGAGCAACGGAAGCCTTAACGACTCCA
JMFF029A10+           GGATCGAAAACCACATCAGCTTTATTNTGAAGAAGAGCAACGGAAGCCTTAACGACTCCA
JMFS145D01+           GGATCGAAAACCACATCAGCTTTATTCTGAAGAAGAGCAACGGAAGCCTTAACGACTCCA
                      ____________________________________________________________
consensus             GGATCGAAAACCACATCAGCTTTATTCTGAAGAAGAGCAACGGAAGCCTTAACGACTCCA
 
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JMFS075G05+           TTTAAGGACATGAGAGCTCCTTCGACGGAGGTGGAGCAGGCGGCGCACGTCATTCCCGTG
JMFS165H12+           TTTAAGGACATGAGAGCTCCTTCGACGGAGGTGGAGCAGGCGGCGCACGTCATTCCCGTG
JMFS132D01+           TTTAAGGACATGAGAGCTCCTTCGACGGAGGTGGAGCAGGCGGCGCACGTCATTCCCGTG
JMFF029A10+           TTTAAGGACATGAGAGCTCCTTCGACGGAGGTGGAGCAGGCGGCGCACGTCATTCCCGTG
JMFS145D01+           TTTAAGGACATGAGAGCTCCTTCGACGGAGGTGGAGCAGGCGGCGCACGTCATTCCCGTG
                      ____________________________________________________________
consensus             TTTAAGGACATGAGAGCTCCTTCGACGGAGGTGGAGCAGGCGGCGCACGTCATTCCCGTG
 
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JMFS075G05+           ACTCTAACCTGAATTCTCCTCAAATTCTCCCCGGAATTCTCCTCGTCGTAAGAATCCAGT
JMFS165H12+           ACTCTAACCTGAATTCTCCTCAAATTCTCCCCGGAATTCTCCTCGTCGTAAGAATCCAGT
JMFS132D01+           ACTCTAACCTGAATTCTCCTCAAATTCTCCCCGGAATTCTCCTCGTCGTAAGAATCCAGT
JMFF029A10+           ACTCTAACCTGAATTCTCCTCAAATTCTCCCCGGAATTCTCCTCGTCGTAAGAATCCAGT
JMFS145D01+           ACTCTAACCTGAATTCTCCTCAAATTCTCCCCGGAATTCTCCTCGTTGTAAGAATCCAGT
                      ____________________________________________________________
consensus             ACTCTAACCTGAATTCTCCTCAAATTCTCCCCGGAATTCTCCTCGTCGTAAGAATCCAGT
 
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JMFS075G05+           AGCCGTACCTCCTCACAGTCGCCGAAATCCTCCTCCGACGAATTTCCGTTCGTCGCCGTC
JMFS165H12+           AGCCGTACCTCCTCACAGTCGCCGAAATCCTCCTCCGACGAATTTCCGTTCGTCGCCGTC
JMFS132D01+           AGCCGTACCTCCTCACAGTCGCCGAAATCCTCCTCCGACGAATTTCCGTTCGTCGCCGTC
JMFF029A10+           AGCCGTACCTCCTCACAGTCGCCGAAATCCTCCTCCGACGAATTTCCGTTCGTCGCCGTC
JMFS145D01+           AGCCGTACCTCCTCACAGTCGCCGAAATCCTCCTCCGACGAATTTCCGTTCGTCGCCGTC
                      ____________________________________________________________
consensus             AGCCGTACCTCCTCACAGTCGCCGAAATCCTCCTCCGACGAATTTCCGTTCGTCGCCGTC
 
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JMFS075G05+           ATCTGAACGTCCCTCATGCTCGGCGACATTTCAATGAACTTCACAAAACCCTCCCCCCTC
JMFS165H12+           ATCTGAACGTCCCTCATGCTCGGCGACATTTCAATGAACTTCACAAAACCCTCCCCCCTC
JMFS132D01+           ATCTGAACGTCCCTCATGCTCGGCGACATTTCAATGAACTTCACAAAACCCTCCCCCCTC
JMFF029A10+           ATNTGAACGTCCCTCATGCTCGGCGACATTTCAATGAACTTCACAAAACCCTCCCCCCTC
JMFS145D01+           ATCTGAACGTCCCTCATGCTCGGCGACATTTCAATGAACTTCACAAAACCCTCCCCCCTC
                      ____________________________________________________________
consensus             ATCTGAACGTCCCTCATGCTCGGCGACATTTCAATGAACTTCACAAAACCCTCCCCCCTC
 
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JMFS075G05+           GGAAAACCTCAAAGCCTATATATATATATATATTTATATATATAGGCCTGTATGTATGTA
JMFS165H12+           GGAAAACCTCAAAGCCTATATATATATATATATTTATATATATAGGCCTGTATGTATGTA
JMFS132D01+           GGAAAACCTCAAAGCCTATATATATATATATATTTATATATATAGGCCTGTATGTATGTA
JMFF029A10+           GGAAAACCTCAAAGCCTATATATATATATATATTTATATATATAGGCCTGTATGTATGTA
JMFS145D01+           GGAAAACCTCAAAGCCTATATATATATATATATTTATATATATAGGCCTGTATGTATGTA
                      ____________________________________________________________
consensus             GGAAAACCTCAAAGCCTATATATATATATATATTTATATATATAGGCCTGTATGTATGTA
 
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JMFS075G05+           TATATGTATATATATGCCTCTCTCTCTCTCTTCTTTTATATAGCAAAAAGAAGTATTATT
JMFS165H12+           TATATGTATATATATGCCTCTCTCTCTCTCTTCTTTTATATAGCAAAAAGAAGTATTATT
JMFS132D01+           TATATGTATATATATGCCTCTCTCTCTCTCTTCTTTTATATAGCAAAAAGAAGTATTATT
JMFF029A10+           TATATGTATATATATGCCTCTCTCTCTCTCTTCTTTTATATAGCAAAAAGAAGTATTATT
JMFS145D01+           TATATGTATATATATGCCTCTCTCTCTCTCTTCTTTTATATAGCAAAAAGAAGTATTATT
                      ____________________________________________________________
consensus             TATATGTATATATATGCCTCTCTCTCTCTCTTCTTTTATATAGCAAAAAGAAGTATTATT
 
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JMFS075G05+           TTAGAGAGAGGCGAGATCGAGGAAGGAAAA                              
JMFS165H12+           TTAGAGAGAGGCGAGATCGAGGAAGGAAAA                              
JMFS132D01+           TTAGAGAGAGGCGAGATCGAGGAAGGAAAA                              
JMFF029A10+           TTAGAGAGAGGCGAGATCGAGGAAGGAAAACTGTGGGCAACT                  
JMFS145D01+           TTAGAGAGAGGCGAGATCGAGGAAGGAAAACTGTGGGCAACTGGAAGAGAGGAAGGAAGG
                      ____________________________________________________________
consensus             TTAGAGAGAGGCGAGATCGAGGAAGGAAAACTGTGGGCAACTGGAAGAGAGGAAGGAAGG