clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFS028C05 | Sequence | 629 | 000512 (5) | emb|CDP05915.1| | 2e-20 | unnamed protein product [Coffea canephora] | |||||
JMFS072G03 | Sequence | 627 | 000512 (5) | emb|CDP05915.1| | 3e-22 | unnamed protein product [Coffea canephora] | |||||
JMFS143F07 | Sequence | 614 | 000512 (5) | emb|CDP05915.1| | 3e-06 | unnamed protein product [Coffea canephora] | |||||
JMSF016K13 | Sequence | 244 | 000512 (5) | 794 | 008488 (2) | ref|XP_006451873.1| | 4e-77 | hypothetical protein CICLE_v10010681mg [Citrus clementina] gb|ESR65113.1| hypoth | |||
JMSF047K24 | Sequence | 617 | 000512 (5) | emb|CDP05915.1| | 2e-19 | unnamed protein product [Coffea canephora] | 276 | 008488 (2) | emb|CAN77048.1| | 3e-14 | hypothetical protein VITISV_027858 [Vitis vinifera] |
This contig is upended
. : . : . : . : . : . :
JMFS072G03+ GCAGGCTT
JMFS028C05+ GCAGGCTT
____________________________________________________________
consensus GCAGGCTT
. : . : . : . : . : . :
JMFS072G03+ CCATGAACANAACCGCTGGAGATGTCGGAGTTCTTCTTTGCAAAAGAGAGCCTGAGAACG
JMFS028C05+ CCATGAACANAACCGCTGGAGATGTCGGAG-TCTTCTTTGCAAAAGAGAGCCTGAGAACG
JMSF047K24+ GCAAAAGAGAGCCTGAGAACG
____________________________________________________________
consensus CCATGAACANAACCGCTGGAGATGTCGGAGTTCTTCTTTGCAAAAGAGAGCCTGAGAACG
. : . : . : . : . : . :
JMFS072G03+ GCTTCAACATACTCAGGCTTCCCTTCCTTGGAATACCAGGAAGCTGATCCCACCATGCAA
JMFS028C05+ GCTTCAACATACTCAGGCTTCCCTTCCTTGGAATACCAGGAAGCTGATCCCACCATGCAA
JMSF047K24+ GCTTCAACATACTCAGGCTTCCCTTCCTTGGAATACCAGGAAGCTGATCCCACCATGCAA
____________________________________________________________
consensus GCTTCAACATACTCAGGCTTCCCTTCCTTGGAATACCAGGAAGCTGATCCCACCATGCAA
. : . : . : . : . : . :
JMFS072G03+ AGCTTCCCAGAACTCTCCGAGAAATAGCCGCTCAAGAGGAACGACAATTCCCGTGGCCCA
JMFS028C05+ AGCTTCCCAGAACTCTCCGAGAAATAGCCGCTCAAGAGGAACGACAATTCCCGTGGCCCA
JMSF047K24+ AGCTTCCCAGAACTCTCCGAGAAATAGCCGCTCAAGAGGAACGACAATTCCCGTGGCCCA
JMFS143F07+ ATTCCCGTGGCCCA
____________________________________________________________
consensus AGCTTCCCAGAACTCTCCGAGAAATAGCCGCTCAAGAGGAACGACAATTCCCGTGGCCCA
. : . : . : . : . : . :
JMFS072G03+ CTGTAATTCCCAGCAGCATAATACGACCACCCATAGGATCCATATCTGGAATATTTATAA
JMFS028C05+ CTGTAATTCCCAGCAGCATAATACGACCACCCATAGGATCCATATCTGGAATATTTATAA
JMSF047K24+ CTGTAATTCCCAGCAGCATAATACGACCACCCATAGGATCCATATCTGGAATATTTATAA
JMFS143F07+ CTGTAATTCCCAGCAGCATAATACGTCCACCCATAGGATCCATATCTGGAATATTTATAA
____________________________________________________________
consensus CTGTAATTCCCAGCAGCATAATACGACCACCCATAGGATCCATATCTGGAATATTTATAA
. : . : . : . : . : . :
JMFS072G03+ GAATCATCCTCCACATAAGAGGGTCTGAGCGTCAAGGACGCTTTAAGTTTAAAAATTTCA
JMFS028C05+ GAATCATCCTCCACATAAGAGGGTCTGAGCGTCAAGGACGCTTTAAGTTTAAAAATTTCA
JMSF047K24+ GAATCATCCTCCACATAAGAGGGTCTGAGCGTCAAGGACGCTTTAAGTTTAAAAATTTCA
JMFS143F07+ GAATCATCCTCCACATAAGAGGGTCTGAGCGTCAAGGACGCTTTAAGTTTAAAAATTTCA
____________________________________________________________
consensus GAATCATCCTCCACATAAGAGGGTCTGAGCGTCAAGGACGCTTTAAGTTTAAAAATTTCA
. : . : . : . : . : . :
JMFS072G03+ GGATCCTCTGTCGTGTAAGCGGATTTCTGGGTGGGCTGGAAGGTAAGAGAATTGATGGAG
JMFS028C05+ GGATCCTCTGTCGTGTAAGCGGATTTCTGGGTGGGCTGGAAGGTAAGAGAATTGATGGAG
JMSF047K24+ GGATCCTCTGTCGTGTAAGCGGATTTCTGGGTGGGCTGGAAGGTAAGAGAATTGATGGAG
JMFS143F07+ GGATCCTCTGTCGTGTAAGCGGATTTCTGGGTGGGCTGGAAGGTAAGAGAATTGATGGAG
____________________________________________________________
consensus GGATCCTCTGTCGTGTAAGCGGATTTCTGGGTGGGCTGGAAGGTAAGAGAATTGATGGAG
. : . : . : . : . : . :
JMFS072G03+ GTATTAGACAACTGACCAAGTGATTTACTGGTCCATAAACTCTCACCGCCATGGTAGTAG
JMFS028C05+ GTATTAGACAACTGACCAAGTGATTTACTGGTCCATAAACTCTCACCGCCATGGTAGTAG
JMSF047K24+ GTATTAGACAACTGACCAAGTGATTTACTGGTCCATAAACTCTCNCCGCCATGGTAGTAG
JMSF016K13+ ATGGTAGTAG
JMFS143F07+ GTATTAGACACCTGACCAAGTGATTTACTGGTCCATAAACTCTCACCGCCATGGTAGTAG
____________________________________________________________
consensus GTATTAGACAACTGACCAAGTGATTTACTGGTCCATAAACTCTCACCGCCATGGTAGTAG
. : . : . : . : . : . :
JMFS072G03+ CTACTCGCAGTGGAGAGGTAAGGTAAAATGTCAGAATGATGAACACGTTGAGTCGGGGTA
JMFS028C05+ CTACTCGCAGTGGAGAGGTAAGGTAAAATGTCAGAATGATGAACACGTTGAGTCGGGGTA
JMSF047K24+ CTACTCGCAGTGGAGAGGTAAGGTAAAATGTCAGAAAGATGAACACGTTGAGTCGGGGTA
JMSF016K13+ CTACTCGCAGTGGAGAGNTAAGGTAAAATGTCAGAATGATGAACACGTTGAGTCGGGGTA
JMFS143F07+ CTACTCGCAGTGGAGAGGTAAGGTAAAATGTCAGAATGATGAACACGTTGAGTCGGGGTA
____________________________________________________________
consensus CTACTCGCAGTGGAGAGGTAAGGTAAAATGTCAGAATGATGAACACGTTGAGTCGGGGTA
. : . : . : . : . : . :
JMFS072G03+ GACTCAGATACATATGAAGAGCAGTGATAAGAGTATGGAATTTCAGGAATATTGGAAGAA
JMFS028C05+ GACTCAGATACATATGAAGAGCAGTGATAAGAGTATGGAATTTCAGGAATATTGGAAGAA
JMSF047K24+ GACTCAGATACATATGAAGAGCAGTGATAAGAGTATGGAATTTCAGGAATATTGGAAGAA
JMSF016K13+ GACTCAGATACATATGAAGAGCAGTGATAAGAGTATGGAATTTCAGGAATATTGGAAGAA
JMFS143F07+ GACTCAGATACATATGAAGAGCAGTGATAAGAGTATGGAATTTCAGGAATATTGGAAGAA
____________________________________________________________
consensus GACTCAGATACATATGAAGAGCAGTGATAAGAGTATGGAATTTCAGGAATATTGGAAGAA
. : . : . : . : . : . :
JMFS072G03+ GAAGAAACTGAGGATAAGCAAAATATAGAGAGAAGTAAGAAAACAGGTAAAGGAAAGATG
JMFS028C05+ GAAGAAACTGAGGATAAGCAAAATATAGAGAGAAGTAAGAAAACAGGTAAAGGAAAGATG
JMSF047K24+ GAAGAAACTGAGGATAAGCAAAATATAGAGAGAAGTAAGAAAACAGGTAAAGGAAAGATG
JMSF016K13+ GAAGAAACTGAGGATAAGCAAAATATAGAGAGAAGTAAGAAAACAGGTAAAGGAAAGATG
JMFS143F07+ GAAGAAACTGAGGATAAGCAAAATATAGAGAGAAGTAAGAAAACAGGTAAAGGAAAGATG
____________________________________________________________
consensus GAAGAAACTGAGGATAAGCAAAATATAGAGAGAAGTAAGAAAACAGGTAAAGGAAAGATG
. : . : . : . : . : . :
JMFS072G03+ ACAGAAGAAGAAGAAGAAA
JMFS028C05+ ACAGAAGAAGAAGAAGAAAGGT
JMSF047K24+ ACAGAAGAAGAAGAAGAAAGGTGTATAGCCATAATCATGCAATGGAGAAAGA
JMSF016K13+ ACAGAAGAAGAAGAAGAAAGGTGTATAGCCATAATCATGCAATGGAGAAAGA
JMFS143F07+ ACAGAAGAAGAAGAAGAAAGGTGTATAGCCATAATCATGCAATGGAGAAAGATGAAGATT
____________________________________________________________
consensus ACAGAAGAAGAAGAAGAAAGGTGTATAGCCATAATCATGCAATGGAGAAAGATGAAGATT
. : . : . : . : . : . :
JMFS143F07+ CCTGCAATGGGAATCTTTACTTTATAGTGCTAGTTCTACGTATCCAGCAAGACTTGGCAG
____________________________________________________________
consensus CCTGCAATGGGAATCTTTACTTTATAGTGCTAGTTCTACGTATCCAGCAAGACTTGGCAG
. : . : . : . : . : . :
JMFS143F07+ ACCCCAAGTCAACGCCCACAGTTTCCTTCCACTTTCTTCCACTTTTAATTTTGCATCGAA
____________________________________________________________
consensus ACCCCAAGTCAACGCCCACAGTTTCCTTCCACTTTCTTCCACTTTTAATTTTGCATCGAA