Contig 000498:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS029G05Sequence606000498 (5)ref|XP_009596424.1|2e-90PREDICTED: putative uncharacterized protein YDL057W [Nicotiana tomentosiformis]
JMFS127F02Sequence608000498 (5)ref|XP_009596424.1|1e-93PREDICTED: putative uncharacterized protein YDL057W [Nicotiana tomentosiformis]
JMSF017I12Sequence512000498 (5)ref|XP_011019441.1|218PREDICTED: uncharacterized protein LOC105122188 [Populus euphratica]827009923 (4)ref|XP_009802768.1|8e-29PREDICTED: putative uncharacterized protein YDL057W [Nicotiana sylvestris]
JMSF018D24Sequence219000498 (5)ref|XP_010047560.1|59.3PREDICTED: uncharacterized protein LOC104436476 [Eucalyptus grandis] gb|KCW79504765009923 (4)ref|XP_009802768.1|2e-21PREDICTED: putative uncharacterized protein YDL057W [Nicotiana sylvestris]
JMSF045G02Sequence737000498 (5)ref|XP_009596424.1|2e-103PREDICTED: putative uncharacterized protein YDL057W [Nicotiana tomentosiformis]828009923 (4)ref|XP_009802768.1|8e-29PREDICTED: putative uncharacterized protein YDL057W [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF045G02+ CGGACAATATAAGGCAGTCTTTCCAATCTAGCCTTGGGGA
                      ____________________________________________________________
consensus CGGACAATATAAGGCAGTCTTTCCAATCTAGCCTTGGGGA
 
. : . : . : . : . : . :
JMSF045G02+ CAAGGCTGCAGCTTAGTGGAATAGTTTGACATGCCAAATGAGTATCGGTTGTTAGGCGGT
JMFS127F02+ TAGGCGGT
                      ____________________________________________________________
consensus CAAGGCTGCAGCTTAGTGGAATAGTTTGACATGCCAAATGAGTATCGGTTGTTAGGCGGT
 
. : . : . : . : . : . :
JMFS029G05+ AACTTTCCTCGGTCACTCGATACTCAACTTTCCCTCTCCTGTTTTTAACGTCAA
JMSF045G02+ CCCTCAAACTTTCCTCGGTCACTCGATACTCAACTTTCCCTCTCCTGTTTTTAACGTCAA
JMFS127F02+ CCCTCAAACTTTCNTCGGTCACTCGATACTCAACTTTCCCTCTCCTGTTTTTAACGTCAA
                      ____________________________________________________________
consensus CCCTCAAACTTTCCTCGGTCACTCGATACTCAACTTTCCCTCTCCTGTTTTTAACGTCAA
 
. : . : . : . : . : . :
JMFS029G05+ TANATCCATCACGCTTGATTTGCTCCAGATAGTTTTTGCCCAACCGACCTTCAATTCCTC
JMSF045G02+ TAAATCCATCACGCTTGATTTGCTCCAGATAGTTTTTGCCCAACCGACCTTCAATTCCTC
JMFS127F02+ TAAATCCATCACGCTTGATTTGCTCCAGATAGTTTTTGCCCAACCGACCTTCAATTCCTC
                      ____________________________________________________________
consensus TAAATCCATCACGCTTGATTTGCTCCAGATAGTTTTTGCCCAACCGACCTTCAATTCCTC
 
. : . : . : . : . : . :
JMFS029G05+ TCTTCAGATTATAGCGACCAGCAATATTGATGACTGTTGGTATATCCCTATACTTTGATG
JMSF045G02+ TCTTCAGATTATAGCGACCAGCAATATTGATGACTGTTGGTATATCCCTATACTTTGATG
JMSF017I12+ TAGCGACCAGCAATATTGATGACTGTTGGTATATCCCTATACTTTGATG
JMFS127F02+ TCTTCAGATTATAGCGACCAGCAATATTGATGACTGTTGGTATATCCCTATACTTTGATG
                      ____________________________________________________________
consensus TCTTCAGATTATAGCGACCAGCAATATTGATGACTGTTGGTATATCCCTATACTTTGATG
 
. : . : . : . : . : . :
JMFS029G05+ CATACAAAAGCACAGCATTCCCTCCTTTGCTATGCCCAATAATTGCTGTTATGAAACGTC
JMSF045G02+ CATACAAAAGCACAGCATTCCCTCCTTTGCTATGCCCAATAATTGCTGTTATGAAACGTC
JMSF017I12+ CATACAAAAGCACAGCATTCCCTCCTTTGCTATGCCCAATAATTGCTGTTATGAAACGTC
JMFS127F02+ CATACAAAAGCACAGCATTCCCTCCTTTGCTATGCCCAATAATTGCTGTTATGAAACGTC
                      ____________________________________________________________
consensus CATACAAAAGCACAGCATTCCCTCCTTTGCTATGCCCAATAATTGCTGTTATGAAACGTC
 
. : . : . : . : . : . :
JMFS029G05+ CATTCTGACGAAAATGTTCAACTACAGTATGCAAATCATCAGCTTCTCTACGGTAGTTAC
JMSF045G02+ CATTCTGACGAAAATGTTCAACTACAGTATGCAAATCATCAGCTTCTCTACGGTAGTTAC
JMSF017I12+ CATTCTGACGAAAATGTTCAACTACAGTATGCAAATCATCAGCTTCTCTACGGTAGTTAC
JMFS127F02+ CATTCTGACGAAAATGTTCAACTACAGTATGCAAATCATCAGCTTCTCTACGGTAGTTAC
                      ____________________________________________________________
consensus CATTCTGACGAAAATGTTCAACTACAGTATGCAAATCATCAGCTTCTCTACGGTAGTTAC
 
. : . : . : . : . : . :
JMFS029G05+ CATACTGGAATGAACCCTCACTTTCTCCATTGCCTGCAAAATCAAAGCGGAAAGCACTAA
JMSF045G02+ CATACTGGAATGAACCCTCACTTTCTCCATTGCCTGCAAAATCAAAGCGGAAAGCACTAA
JMSF017I12+ CATACTGGAATGAACCCTCACTTTCTCCATTGCCTGCAAAATCAAAGCGGAAAGCACTAA
JMFS127F02+ CATACTGGAATGAACCCTCACTTTCTCCATTGCCTGCAAAATCAAAGCGGAAAGCACTAA
                      ____________________________________________________________
consensus CATACTGGAATGAACCCTCACTTTCTCCATTGCCTGCAAAATCAAAGCGGAAAGCACTAA
 
. : . : . : . : . : . :
JMFS029G05+ TTCCTCCTTTCTCAAAAGCAGCAGCAAGGTTCACCATGGGAATGCGATCCTTTGAGGATT
JMSF045G02+ TTCCTCCTTTCTCAAAAGCAGCAGCAAGGTTCACCATGGGAATGCGATCCTTTGAGGATT
JMSF017I12+ TTCCTCCTTTCTCAAAAGCAGCAGCAAGGTTCACCATGGGAATGCGATCCTTTGAGGATT
JMFS127F02+ TTCCTCCTTTCTCAAAAGCAGCAGCAAGGTTCACCATGGGAATGCGATCCTTTGAGGATT
                      ____________________________________________________________
consensus TTCCTCCTTTCTCAAAAGCAGCAGCAAGGTTCACCATGGGAATGCGATCCTTTGAGGATT
 
. : . : . : . : . : . :
JMFS029G05+ TGAAACCATGACACACAATTACAAGCTCCTTAGAGCCTGTTTCATGTAATATGCCCAAAA
JMSF045G02+ TGAAACCATGACACACAATTACAAGCTCCTTAGAGCCTGTTTCATGTAATATGCCCAAAA
JMSF017I12+ TGAAACCATGACACACAATTACAAGCTCCTTAGAGCCTGTTTCATGTAATATGCCCAAAA
JMSF018D24+ ACCATGACACACAATTACAAGCTCCTTAGAGCCTGTTTCATGTAATATGCCCAAAA
JMFS127F02+ TGAAACCATGACACACAATTACAAGCTCCTTAGAGCCTGTTTCATGTAATATGCCCAAAA
                      ____________________________________________________________
consensus TGAAACCATGACACACAATTACAAGCTCCTTAGAGCCTGTTTCATGTAATATGCCCAAAA
 
. : . : . : . : . : . :
JMFS029G05+ GCTTCTCATCATGGTTGTTCACCACCACTATCTTTTTACGTTGCATCACTG
JMSF045G02+ GCTTCTCATCATGGTTGTTCACCACCACTATCTTTTTACGTTGCATCACTG
JMSF017I12+ GCTTCTCATCATGGTTGTTCACCACCACTATCTTTTTACGTTGCATCACTG
JMSF018D24+ GCTTCTCATCATGGTTGTTCACCACCACTATCTTTTTACGTTGCATCACTG
JMFS127F02+ GCTTCTCATCATGGTTGTTCACCACCACTATCTTTTTACGTTGCATCACTGCTCCATATA
                      ____________________________________________________________
consensus GCTTCTCATCATGGTTGTTCACCACCACTATCTTTTTACGTTGCATCACTGCTCCATATA
 
. : . : . : . : . : . :
JMFS127F02+ TCGACAATTCCAGAGCTTCTTTCTCGAGGATTTTGAAGCAAGTTGTACACTTGTACTATC
                      ____________________________________________________________
consensus TCGACAATTCCAGAGCTTCTTTCTCGAGGATTTTGAAGCAAGTTGTACACTTGTACTATC