| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF004J11 | Sequence | 608 | 000493 (7) | emb|CDO98821.1| | 1e-79 | unnamed protein product [Coffea canephora] | 725 | 000493 (7) | ref|XP_010314713.1| | 216 | PREDICTED: uncharacterized protein LOC101264805 [Solanum lycopersicum] |
| JMFF049L24 | Sequence | 629 | 000493 (7) | emb|CDO98821.1| | 2e-92 | unnamed protein product [Coffea canephora] | 512 | 000493 (7) | ref|XP_007138949.1| | 1e-16 | hypothetical protein PHAVU_009G251800g [Phaseolus vulgaris] gb|ESW10943.1| hypot |
| JMFS123D08 | Sequence | 371 | 000493 (7) | ||||||||
| JMSF032H07 | Sequence | 688 | 000493 (7) | emb|CDO98821.1| | 1e-83 | unnamed protein product [Coffea canephora] | 757 | 000493 (7) | ref|XP_010314713.1| | 229 | PREDICTED: uncharacterized protein LOC101264805 [Solanum lycopersicum] |
This contig is upended
. : . : . : . : . : . :
JMSF032H07- GGG
____________________________________________________________
consensus GGG
. : . : . : . : . : . :
JMSF032H07- GGGCCACGAACACTCGTACATCTACTTTTTCTTTACTGCTGCCCGCTTCTCATCCTCCTC
____________________________________________________________
consensus GGGCCACGAACACTCGTACATCTACTTTTTCTTTACTGCTGCCCGCTTCTCATCCTCCTC
. : . : . : . : . : . :
JMFF004J11- ATTCTTTTCACATGCCGAATCTTCCTTCCACTGCCCCCCTTACCCTTTCCCTACTTCAT
JMSF032H07- CATTCTTTTCACATGCCGAATCTTCCTTCCACTGCCCCCCTTACCCTTTCCCTACTTCAT
JMFF049L24- ACCCTTTCCCTACTTCAT
____________________________________________________________
consensus CATTCTTTTCACATGCCGAATCTTCCTTCCACTGCCCCCCTTACCCTTTCCCTACTTCAT
. : . : . : . : . : . :
JMFF004J11- CTCTCCTCTCCGCTACTCTCCCCCACATTCCTCCTCCTCCTTCTCCTATTCTCCATCCGC
JMSF032H07- CTCTCCTCTCCGCTACTCTCCCCCACATTCCTCCTCCTCCTTCTCCTATTCTCCATCCGC
JMFF049L24- CTCTCCTCTCCGCTACTCTCCCCCACATTCCTCCTCCTCCTTCTCCTATTCTCCATCCGC
____________________________________________________________
consensus CTCTCCTCTCCGCTACTCTCCCCCACATTCCTCCTCCTCCTTCTCCTATTCTCCATCCGC
. : . : . : . : . : . :
JMFF004J11- TTCGCTTCTCCGCCTTCCGCCGCTTCTCCTCCACCATGCCTTCCGGCGACTTCATGATCC
JMSF032H07- TTCGCTTCTCCGCCTTCCGCCGCTTCTCCTCCACCATGCCTTCCGGCGACTTCATGATCC
JMFF049L24- TTCGCTTCTCCGCCTTCCGCCGCTTCTCCTCCACCATGCCTTCCGGCGACTTCATGATCC
____________________________________________________________
consensus TTCGCTTCTCCGCCTTCCGCCGCTTCTCCTCCACCATGCCTTCCGGCGACTTCATGATCC
. : . : . : . : . : . :
JMFF004J11- CTCCTTTTGAGCTCGCCTCCGAGTTCGACTTCGATCGCGTCGTCTCTTCCGACGGACTCG
JMSF032H07- CTCCTTTTGAGCTCGCCTCCGAGTTCGACTTCGATCGCGTCGTCTCTTCCGACGGACTCG
JMFF049L24- CTCCTTTTGAGCTCGCCTCCGAGTTCGACTTCGATCGCGTCGTCTCTTCCGACGGACTCG
____________________________________________________________
consensus CTCCTTTTGAGCTCGCCTCCGAGTTCGACTTCGATCGCGTCGTCTCTTCCGACGGACTCG
. : . : . : . : . : . :
JMFF004J11- TCTCCATCTGCGGCTTCGGTTCCCTCCTCTCAGAGAGGAGTGCTCGAAGTACGTTTCCCG
JMSF032H07- TCTCCATCTGCGGCTTCGGTTCCCTCCTCTCAGAGAGGAGTGCTCGAAGTACGTTTCCCG
JMFF049L24- TCTCCATCTGCGGCTTCGGTTCCCTCCTCTCAGAGAGGAGTGCTCGAAGTACGTTTCCCG
____________________________________________________________
consensus TCTCCATCTGCGGCTTCGGTTCCCTCCTCTCAGAGAGGAGTGCTCGAAGTACGTTTCCCG
. : . : . : . : . : . :
JMFF004J11- ATCTGATCAATTTCAGAGTCGCCAAATTGAGTGGATTCCGTAGGGTTTTCGCACACGCAG
JMSF032H07- ATCTGATCAATTTCAGAGTCGCCAAATTGAGTGGATTCCGTAGGGTTTTCGCACACGCAG
JMFF049L24- ATCTGATCAATTTCAGAGTCGCCAAATTGAGTGGATTCCGTAGGGTTTTCGCACACGCAG
____________________________________________________________
consensus ATCTGATCAATTTCAGAGTCGCCAAATTGAGTGGATTCCGTAGGGTTTTCGCACACGCAG
. : . : . : . : . : . :
JMFF004J11- CGCCTATCTTCTTCGAGCGTGGCATTGCTCGACCTGAAACCAAGGAAATATCAAGCTTGA
JMSF032H07- CGCCTATCTTCTTCGAGCGTGGCATTGCTCGACCTGAAACCAAGGAAATATCAAGCTTGA
JMFF049L24- CGCCTATCTTCTTCGAGCGTGGCATTGCTCGACCTGAAACCAAGGAAATATCAAGCTTGA
____________________________________________________________
consensus CGCCTATCTTCTTCGAGCGTGGCATTGCTCGACCTGAAACCAAGGAAATATCAAGCTTGA
. : . : . : . : . : . :
JMFF004J11- GTGTGGAGCATTGTGAAGGCGAAACCCTCGTAATTTCTAAATTTGAAATTCCAAAATCAG
JMSF032H07- GTGTGGAGCATTGTGAAGGCGAAACCCTCGTAATTTCTAAATTTGAAATTCCAAAATCAG
JMFF049L24- GTGTGGAGCATTGTGAAGGCGAAACCCTCGTAATTTCTAAATTTGAAATTCCAAAATCAG
____________________________________________________________
consensus GTGTGGAGCATTGTGAAGGCGAAACCCTCGTAATTTCTAAATTTGAAATTCCAAAATCAG
. : . : . : . : . : . :
JMFF004J11- AGATTCCAGCCTTTATAGAAAGGGAGCATGAATTTCGGTTTCTTGCTGTCACTCCTGAAA
JMSF032H07- AGATTCCAGCCTTTATAGAAAGGGAGCATGAATTTCGGTTTCTTGCTGTCACTCCTGAAA
JMFF049L24- AGAGTCCAGCCTTTATAGAAAGGGAGCATGAATTTCGGTTTCTTGCTGTCACTCCTGAAA
rJMSF032H07+ TCCAGCCNTTATAGAAAGGGAGCATGAA-TTCGGTTTCTTGCTGTCACTCCTGAAA
rJMFF004J11+ GAAA
____________________________________________________________
consensus AGATTCCAGCCTTTATAGAAAGGGAGCATGAATTTCGGTTTCTTGCTGTCACTCCTGAAA
. : . : . : . : . : . :
JMFF004J11- CATTGAATGGATTATTTTACACAAATCATGCGGTACTATGTGCACGTTATACTGATGAGG
JMSF032H07- CATTGAATGGATTATTTTACACAAATCATGCGGTACTATGTGCACGTTATACTGATGAGG
JMFF049L24- CATTGAATGGATTATTTTACACAAATCATGCGGTACTATGTGCACGTTATACTGATGAGG
rJMSF032H07+ CATTGAATGGATTATTTTACACAAATCATGCGGTACTATGTGCACGTTATACTGATGAGG
rJMFF004J11+ CATNGAATGGATTATTTTACACAAATCATGCGGTACTATGTGCACGTTATACTGATGAGG
____________________________________________________________
consensus CATTGAATGGATTATTTTACACAAATCATGCGGTACTATGTGCACGTTATACTGATGAGG
. : . : . : . : . : . :
JMFF004J11- AGTATTTTA
JMSF032H07- AGTATTTTAAGAATAGATGTAAAGG
JMFF049L24- AGTATTTTAAGAATAGATGTAAAGGAGACCGAGAGATCTACTTTCAGAGATATGGGAAAT
rJMSF032H07+ AGTATTTTAAGAATAGATGTAAAGGAGACCGAGAGATCTACTTTCAGAGATATGGGAAAT
rJMFF004J11+ AGTATTTTAAGAATAGATGTAAAGGAGACCGAGAGATCTACTTTCAGAGATATGGGAAAT
____________________________________________________________
consensus AGTATTTTAAGAATAGATGTAAAGGAGACCGAGAGATCTACTTTCAGAGATATGGGAAAT
. : . : . : . : . : . :
JMFF049L24- ATAACATCGAC
rJMSF032H07+ ATAACATCGACAAGATTTGGCGAGATGATATTTTACCCTGCCGTGTTTATCTACGCCATT
rJMFF004J11+ ATAACATCGACAAGATTTGGCGAGATGATATTTTACCCTGCCGTGTTTATCTACGCCATT
____________________________________________________________
consensus ATAACATCGACAAGATTTGGCGAGATGATATTTTACCCTGCCGTGTTTATCTACGCCATT
. : . : . : . : . : . :
rJMSF032H07+ GTGTCCTGGCAGCAGCAAATCTTGGTGAGGTGGCATACAATAATTTTCTAGATCACACAT
rJMFF004J11+ GTGTCCTGGCAGCAGCAAATCTTGGTGAGGTGGCATACAATAATTTTCTAGATCACACAT
rJMFF049L24+ CAATAATTTTCTAGATCACACAT
____________________________________________________________
consensus GTGTCCTGGCAGCAGCAAATCTTGGTGAGGTGGCATACAATAATTTTCTAGATCACACAT
. : . : . : . : . : . :
rJMSF032H07+ ACCTCGGAGATCGGAAAACAACCATCCGAGAGTATCTTGCAACAACTGGTTCCGGCATCA
rJMFF004J11+ ACCTCGGAGATCGGAAAACAACCATCCGAGAGTATCTTGCAACAACTGGTTCCGGCATCA
rJMFF049L24+ ACCTCGGAGATCGGAAAACAACCATCCGAGAGTATCTTGCAACAACTGGTTCCGGCATCA
____________________________________________________________
consensus ACCTCGGAGATCGGAAAACAACCATCCGAGAGTATCTTGCAACAACTGGTTCCGGCATCA
. : . : . : . : . : . :
rJMSF032H07+ TGCAAGAGGAGCCACCCGAAGTTTTAAAAGAGAGATATGGTGGTTAAGATGGTGTGCCCT
rJMFF004J11+ TGGAAGAGGAGCCACCCGAAGTTTTAAAAGAGAGATATGGTGGTTAAGATGGTGTGCCCT
rJMFF049L24+ TGGAAGAGGAGCCACCCGAAGTTTTAAAAGAGAGATATGGTGGTTAAGATGGTGTGCCCT
____________________________________________________________
consensus TGGAAGAGGAGCCACCCGAAGTTTTAAAAGAGAGATATGGTGGTTAAGATGGTGTGCCCT
. : . : . : . : . : . :
rJMSF032H07+ GAGATAGTGTTCGTTGACTACAGATTCGTTAATTCAACTGGCAGTTAAAATATGGAATAT
rJMFF004J11+ GAGATAGTGTTCGTTGACTACAGATTCGTTAATTCAACTGGCAGTTAAAATATGGAATAT
rJMFF049L24+ GAGATAGTGTTCGTTGACTACAGATTCGTTAATTCAACTGGCAGTTAAAATATGGAATAT
JMFS123D08+ ATATGGAATAT
____________________________________________________________
consensus GAGATAGTGTTCGTTGACTACAGATTCGTTAATTCAACTGGCAGTTAAAATATGGAATAT
. : . : . : . : . : . :
rJMSF032H07+ CTATTTTAGCTCTTAAGATGGATCTTCATTTCTTCTTTTGATTCTACTCTAGTATCCAGC
rJMFF004J11+ CTATTTTAGCTCTTAAGATGGATCTTCATTTCTTCTTTTGATTCTACTCTAGTATCCAGC
rJMFF049L24+ CTATTTTAGCTCTTAAGATGGATCTTCATTTCTTCTTTTGATTCTACTCTAGTATCCAGC
JMFS123D08+ TTATTTTAGCTCTTAAGATGGATCTTCATTTCTTCTTTTGATTCTACTTTAGTATCCAGC
____________________________________________________________
consensus CTATTTTAGCTCTTAAGATGGATCTTCATTTCTTCTTTTGATTCTACTCTAGTATCCAGC
. : . : . : . : . : . :
rJMSF032H07+ GGTAATCAATATTAGTACTAATTAATGTTTCCAGATTCAGCTGTGGTTATGTGACTGGCC
rJMFF004J11+ GGTAATCAATATTAGTACTAATTAATGTTTCCAGATTCAGCTGTGGTTATGTGACTGGCC
rJMFF049L24+ GGTAATCAATATTAGTACTAATTAATGTTTCCAGATTCAGCTGTGGTTATGTGACTGGCC
JMFS123D08+ GGTAATCAATATTAGTACTAATTAATGTTTCCAGATTCAGCTGTGGTTATGTGACTGGCC
____________________________________________________________
consensus GGTAATCAATATTAGTACTAATTAATGTTTCCAGATTCAGCTGTGGTTATGTGACTGGCC
. : . : . : . : . : . :
rJMSF032H07+ AAGCTTTGTAGCTGGCCAAGCTGAAAGTTGGAGAATGCTATACTTATATATAGTACAAAG
rJMFF004J11+ AAGCTTTGTAGCTGGCCAAGCTGAAAGTTGGAGAATGCTATACTTATATATAGTACAAAG
rJMFF049L24+ AAGCTTTGTAGCTGGCCAAGCTGAAAGTTGGAGAATGCTATACTTATATATAGTACAAAG
JMFS123D08+ AAGCTTTGTAGCTGGCCAAGCTGAAAGTTGGAGAATGCTATACTTATATATAGTTCAAAG
____________________________________________________________
consensus AAGCTTTGTAGCTGGCCAAGCTGAAAGTTGGAGAATGCTATACTTATATATAGTACAAAG
. : . : . : . : . : . :
rJMSF032H07+ TAGTAGTTAAAATCATATGTTTCATAAATAATGTCTCTAGTGTGTAACCTCTGGCTCTGA
rJMFF004J11+ TAGTAGTTAAAATCACATGTTTCATAAATAATGTCTCTAGTGTGTAACCTCTGGCTCTGA
rJMFF049L24+ TAGTAGTTAAAATCATATGTTTCATAAATAATGTCTCTA--GTGTAACCTCTGGCTCTGA
JMFS123D08+ TAGTAGTTAAAATCATATGTTTCATAAATAATGTCTCTAGTGTGTAACCTCTGGCTCTGA
____________________________________________________________
consensus TAGTAGTTAAAATCATATGTTTCATAAATAATGTCTCTAGTGTGTAACCTCTGGCTCTGA
. : . : . : . : . : . :
rJMSF032H07+ GAGGGTTTTTGCTGGCAGTTGTAAC
rJMFF004J11+ GAGGGTTTTTGCTGGCAGTTGTAACATGCCATGGCGCCCTATTCAGTGAGTTTGGGATAA
rJMFF049L24+ GAGGGTTTTTGCTGGCAGTTGTAACATGCCATGGCGCCCTATTCAGTGAGTTTGGGATAA
JMFS123D08+ GAGGGTTTTTGCTGGCAGTTGTAACATGCCATGGCGCCCTATTCAGTGAGTTTGGGATAA
____________________________________________________________
consensus GAGGGTTTTTGCTGGCAGTTGTAACATGCCATGGCGCCCTATTCAGTGAGTTTGGGATAA
. : . : . : . : . : . :
rJMFF004J11+ T
rJMFF049L24+ TTATTTCCTAT
JMFS123D08+ TTATTTCCTATATCTCATTTCTTGTTTACXXXXXXXXXXXXXXXXXXXCCGAGACTAGTC
____________________________________________________________
consensus TTATTTCCTATATCTCATTTCTTGTTTACNNNNNNNNNNNNNNNNNNNCCGAGACTAGTC