Contig 000492:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS122D04Sequence588000492 (4)ref|XP_009621934.1|5e-45PREDICTED: uncharacterized protein LOC104113475 isoform X1 [Nicotiana tomentosi
JMFS124H10Sequence574000492 (4)ref|XP_009621934.1|2e-44PREDICTED: uncharacterized protein LOC104113475 isoform X1 [Nicotiana tomentosi
JMFS125A04Sequence564000492 (4)ref|XP_009621936.1|1e-41PREDICTED: uncharacterized protein LOC104113475 isoform X3 [Nicotiana tomentosi
JMSF052M09Sequence729000492 (4)ref|XP_009621935.1|2e-77PREDICTED: uncharacterized protein LOC104113475 isoform X2 [Nicotiana tomentosi817019466ref|XP_009799994.1|6e-53PREDICTED: uncharacterized protein LOC104245974 isoform X3 [Nicotiana sylvestri

Alignment

This contig is upended


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JMSF052M09+                                         GAAGTAACGGACTGATTGCAGAATTGTCCA
                      ____________________________________________________________
consensus                                           GAAGTAACGGACTGATTGCAGAATTGTCCA
 
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JMSF052M09+           GAGATGGCTGAAGTCGTACANCCTTCCACAGTTATATTCCCACTGAAAGAATATGCTGAA
                      ____________________________________________________________
consensus             GAGATGGCTGAAGTCGTACANCCTTCCACAGTTATATTCCCACTGAAAGAATATGCTGAA
 
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JMSF052M09+           CCTCGATTAATCATTTTTGACTGCGTCCTCATAGGTCCAACACCATTAAATAGGCCAATA
                      ____________________________________________________________
consensus             CCTCGATTAATCATTTTTGACTGCGTCCTCATAGGTCCAACACCATTAAATAGGCCAATA
 
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JMSF052M09+           TACCATACACCGGAAGGTATCTGCTCATTTGTTAATTTCAAAAATATAGTCTTCTGCATC
JMFS124H10+                               CTGCTCATTTGTTAATTTCAAAAATATAGTCTTCTGCATC
JMFS125A04+                                         GTTAATTTCAAAAATATAGTCTTCTGCATC
JMFS122D04+                       GAAGGTATCTGCTCATTTGTTAATTTCAAAAATATAGTCTTCTGCATC
                      ____________________________________________________________
consensus             TACCATACACCGGAAGGTATCTGCTCATTTGTTAATTTCAAAAATATAGTCTTCTGCATC
 
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JMSF052M09+           GGATAGCACTTCTCAACAAGTTGGAGATCTTGTACAAAGGAGCCATTGGAGACATAGTCT
JMFS124H10+           GGATAGCACTTCTCAACAAGTTGGAGATCTTGTACAAAGGAGCCATTGGAGACATAGTCT
JMFS125A04+           GGATAGCACTTCTCAACAAGTTGGAGATCTTGTACAAAGGAGCCATTGGAGACATAGTCT
JMFS122D04+           GGATAGCACTTCTCAACAAGTTGGAGATCTTGTACAAAGGAGCCATTGGAGACATAGTCT
                      ____________________________________________________________
consensus             GGATAGCACTTCTCAACAAGTTGGAGATCTTGTACAAAGGAGCCATTGGAGACATAGTCT
 
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JMSF052M09+           AACACTAGCCCTGTAGCAGAAATGTTATAGACATCAGGCAGAGGAGGGCTTCCTTCTCGG
JMFS124H10+           AACACTAGCCCTGTAGCAGAAATGTTATAGACATCAGGCAGAGGAGGGCTTCCTTCTCGG
JMFS125A04+           AACACTAGCCCTGTAGCAGAAATGTTATAGACATCAGGCAGAGGAGGGCTTCCTTCTCGG
JMFS122D04+           AACACTAGCCCTGTAGCAGAAATGTTATAGACATCAGGCAGAGGAGGGCTTCCTTCTCGG
                      ____________________________________________________________
consensus             AACACTAGCCCTGTAGCAGAAATGTTATAGACATCAGGCAGAGGAGGGCTTCCTTCTCGG
 
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JMSF052M09+           AAGCAAATAATTGGCATGGTACTTTTAGGTGACTTTCTAATCTTCTTGAGGTCAATATCG
JMFS124H10+           AAGCAAATAATTGGCATGGTACTTTTAGGTGACTTTCTAATCTTCTTGAGGTCAATATCG
JMFS125A04+           AAGCAAATAATTGGCATGGTACTTTTAGGTGACTTTCTAATCTTCTTGAGGTCAATATCG
JMFS122D04+           AAGCAAATAATTGGCATGGTACTTTTAGGTGACTTTCTAATCTTCTTGAGGTCAATATCG
                      ____________________________________________________________
consensus             AAGCAAATAATTGGCATGGTACTTTTAGGTGACTTTCTAATCTTCTTGAGGTCAATATCG
 
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JMSF052M09+           ACATCTGAATCTAGACTTATGTCTAGTGAAGAGAACCACGGAGGCAAATCCACTCTGATA
JMFS124H10+           ACATCTGAATCTAGACTTATGTCTAGTGAAGAGAACCACGGAGGCAAATCCACTCTGATA
JMFS125A04+           ACATCTGAATCTAGACTTATGTCTAGTGAAGAGAACCACGGAGGCAAATCCACTCTGATA
JMFS122D04+           ACATCTGAATCTAGACTTATGTCTAGTGAAGAGAACCACGGAGGCAAATCCACTCTGATA
                      ____________________________________________________________
consensus             ACATCTGAATCTAGACTTATGTCTAGTGAAGAGAACCACGGAGGCAAATCCACTCTGATA
 
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JMSF052M09+           TAACGCCAATCATAAGGTTTGAGCGCAGTCCTTGCATATGTGAAGCTGGACAGAGTGACG
JMFS124H10+           TAACGCCAATCATAAGGTTTGAGCGCAGTCCTTGCATATGTGAAGCTGGACAGAGTGACG
JMFS125A04+           TAACGCCAATCATAAGGTTTGAGCGCAGTCCTTGCATATGTGAAGCTGGACAGAGTGACG
JMFS122D04+           TAACGCCAATCATAAGGTTTGAGCGCAGTCCTTGCATATGTGAAGCTGGACAGAGTGACG
                      ____________________________________________________________
consensus             TAACGCCAATCATAAGGTTTGAGCGCAGTCCTTGCATATGTGAAGCTGGACAGAGTGACG
 
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JMSF052M09+           GCGTTGTACCGACCGACAGCATCACCTTGTACTTGTCCGTACGACAGACAGCACCCACAA
JMFS124H10+           GCGTTGTACCGACCGACAGCATCACCTTGTACTTGTCCGTACGACAGACAGCACCCACAA
JMFS125A04+           GCGTTGTACCGACCGACAGCATCACCTTGTACTTGTCCGTACGACAGACAGCACCCACAA
JMFS122D04+           GCGTTGTACCGACCGACAGCATCACCTTGTACTTGTCCGTACGACAGACAGCACCCACAA
                      ____________________________________________________________
consensus             GCGTTGTACCGACCGACAGCATCACCTTGTACTTGTCCGTACGACAGACAGCACCCACAA
 
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JMSF052M09+           ACAACACAGTACAGAGTGAAGAATAGATAGAGACAGATATTCGAATCAGAATGAGTCGGA
JMFS124H10+           ACAACACAGTACAGAGTGAAGAATAGATAGAGACAGATATTCGAATCAGAATGAGTCGGA
JMFS125A04+           ACAACACAGTACAGAGTGAAGAATAGATAGAGACAGATATTCGAATCAGAATGAGTCGGA
JMFS122D04+           ACAACACAGTACAGAGTGAAGAATAGATAGAGACAGATATTCGAATCAGAATGAGTCGGA
                      ____________________________________________________________
consensus             ACAACACAGTACAGAGTGAAGAATAGATAGAGACAGATATTCGAATCAGAATGAGTCGGA
 
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JMSF052M09+           GTGGGATTTTTAGCCATTGATTCTCAGTGAATCAGAGAATTCTTTTCGCTGAATGGATCA
JMFS124H10+           GTGGGATTTTTAGCCATTGATTCTCAGTGAATCAGAGAATTCTTTTCGCTGAATGGATCA
JMFS125A04+           GTGGGATTTTTAGCCATTGATTCTCAGTGAATCAGAGAATTCTTTTCGCTGAATGGATCA
JMFS122D04+           GTGGGATTTTTAGCCATTGATTCTCAGTGAATCAGAGAATTCTTTTCGCTGAATGGATCA
                      ____________________________________________________________
consensus             GTGGGATTTTTAGCCATTGATTCTCAGTGAATCAGAGAATTCTTTTCGCTGAATGGATCA
 
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JMSF052M09+           TGAAATCATTCTCCATGTATGTACGCATATAAATATTGC                     
JMFS124H10+           TGAAATCATTCTCCATGTATGTACGCATATAAATCTTGCAAATGTATTAGTGCT      
JMFS125A04+           TGAAATCATTCTCCATGTATGTACGCATATAAATCTTGCAAATGTATTAGTGCT      
JMFS122D04+           TGAAATCATTCTCCATGTATGTACGCATATAAATCTTGCAAATGTATTAGTGCTGTTGAG
                      ____________________________________________________________
consensus             TGAAATCATTCTCCATGTATGTACGCATATAAATCTTGCAAATGTATTAGTGCTGTTGAG