Contig 000488:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF037G24Sequence592000488 (4)ref|XP_011086275.1|2e-76PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH2-like 719005474 (2)ref|XP_002530426.1|3e-44SEC14 cytosolic factor, putative [Ricinus communis] gb|EEF31957.1| SEC14 cytosol
JMFS036E12Sequence627000488 (4)ref|XP_011086275.1|2e-108PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH2-like
JMFS061E11Sequence627000488 (4)ref|XP_011086275.1|3e-109PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH2-like
JMFS114H03Sequence525000488 (4)ref|XP_011086275.1|2e-58PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH2-like

Alignment

This contig is upended


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JMFS061E11+                                       AATGTAGTATGTAACTGTCTTCTCTGGATAAT
JMFS036E12+                                       AATGTAGTATGTAACTGTCTTCTCTGGATAAT
                      ____________________________________________________________
consensus                                         AATGTAGTATGTAACTGTCTTCTCTGGATAAT
 
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JMFS061E11+           TCAGGTCATCAATTGATGAAATAACAGTGCATAACTTTATTTGGCTCAAAGCTGAAAGTT
JMFS036E12+           TCAGGTCATCAATTGATGAAATAACAGTGCATAACTTTATTTGGCTCAAAGCTGAAAGTT
                      ____________________________________________________________
consensus             TCAGGTCATCAATTGATGAAATAACAGTGCATAACTTTATTTGGCTCAAAGCTGAAAGTT
 
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JMFS061E11+           TAAGGCCCGTCATATCAAAAATCTTGATGCATTTGCTAATATGTTTCCCATGCTTCTTCG
JMFS036E12+           TAAGGCCCGTCATATCAAAAATCTTGATGCATNTGCTAATATGTTTCCCATGCTTCTTCG
JMFF037G24+                CCCGTCATATCAAAAATCTTGATGCATTTGNTAATATGTTTCCCATGCTTCTTCG
                      ____________________________________________________________
consensus             TAAGGCCCGTCATATCAAAAATCTTGATGCATTTGCTAATATGTTTCCCATGCTTCTTCG
 
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JMFS061E11+           ATGCAGCAGGCAGAACCACACGATCCCTATACTCATTGATCTGAATGTGAGATTGTACAT
JMFS036E12+           ATGCAGCAGGCAGAACCACACGATCCCTATACTCATTGATCTGAATGTGAGATTGTACAT
JMFF037G24+           ATGCAGCAGGCAGAACCACACGATCCCTATACTCATTGATCTGAATGTGAGATTGTACAT
                      ____________________________________________________________
consensus             ATGCAGCAGGCAGAACCACACGATCCCTATACTCATTGATCTGAATGTGAGATTGTACAT
 
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JMFS061E11+           AGTAATTATCCGATGCTTTGTCAAATGTGCTTAGACCCACACCAAAAGCAAATACCGGAA
JMFS036E12+           AGTAATTATCCGATGCTTTGTCAAATGTGCTTAGACCCACACCAAAAGCAAATACCGGAA
JMFF037G24+           AGTAATTATCCGATGCTTTGTCAAATGTGCTTAGACCCACACCAAAAGCAAATACCGGAA
JMFS114H03+                          CTTTGTCAAATGTGCTTAGACCCACACCAAAAGCAAATACCGGAA
                      ____________________________________________________________
consensus             AGTAATTATCCGATGCTTTGTCAAATGTGCTTAGACCCACACCAAAAGCAAATACCGGAA
 
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JMFS061E11+           GGCCCTCTCTTGTGTAACCAGAAAGTCCAACTAGATGTGAATCTCGTACATCTCTGTAAC
JMFS036E12+           GGCCCTCTCTTGTGTAACCAGAAAGTCCAACTAGATGTGAATCTCGTACATCTCTGTAAC
JMFF037G24+           GGCCCTCTCTTGTGTAACCAGAAAGTCCAACTAGATGTGAATCTCGTACATCTCTGTAAC
JMFS114H03+           GGCCCTCTCTTGTGTAACCAGAAAGTCCAACTAGATGTGAATCTCGTACATCTCTGTAAC
                      ____________________________________________________________
consensus             GGCCCTCTCTTGTGTAACCAGAAAGTCCAACTAGATGTGAATCTCGTACATCTCTGTAAC
 
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JMFS061E11+           GATCAGTAGGAATGATAGGTTTTGCTAAGATATCATCTATCTCATTTTGCACCCTCCATT
JMFS036E12+           GATCAGTAGGAATGATAGGTTTTGCTAAGATATCATCTATCTCATTTTGCACCCTCCATT
JMFF037G24+           GATCAGTAGGAATGATAGGTTTTGCTAAGATATCATCTATCTCATTTTGCACCCTCCATT
JMFS114H03+           GATCAGTAGGAATGATAGGTTTTGCTAAGATATCATCTATCTCATTTTGCACCCTCCATT
                      ____________________________________________________________
consensus             GATCAGTAGGAATGATAGGTTTTGCTAAGATATCATCTATCTCATTTTGCACCCTCCATT
 
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JMFS061E11+           TTAAGCAATCCACCAACATCTTGTGGGCCTTAGAAACATTTCCTTCTCTTGCCGTTAGGA
JMFS036E12+           TTAAGCAATCCACCAACATCTTGTGGGCCTTAGAAACATTTCCTTCTCTTGCCGTTAGGA
JMFF037G24+           TTAAGCAATCCACCAACATCTTGTGGGCCTTAGAAACATTTCCTTCTCTTGCCGTTAGGA
JMFS114H03+           TTAAGCAATCCACCAACATCTTGTGGGCCTTAGAAACATTTCCTTCTCTTGCCGTTAGGA
                      ____________________________________________________________
consensus             TTAAGCAATCCACCAACATCTTGTGGGCCTTAGAAACATTTCCTTCTCTTGCCGTTAGGA
 
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JMFS061E11+           AACGCACTAGAGTTTCATGTGGATGTCCTTGATGAATATTCTTGAAAGTCCTCTCGAGTG
JMFS036E12+           AACGCACTAGAGTTTCATGTGGATGTCCTTGATGAATATTCTTGAAAGTCCTCTCGAGTG
JMFF037G24+           AACGCACTAGAGTTTCATGTGGATGTCCTTGATGAATATTCTTGAAAGTCCTCTCGAGTG
JMFS114H03+           AACGCACTAGAGTTTCATGTGGATGTCCTTGATGAATATTCTTGAAAGTCCTCTCGAGTG
                      ____________________________________________________________
consensus             AACGCACTAGAGTTTCATGTGGATGTCCTTGATGAATATTCTTGAAAGTCCTCTCGAGTG
 
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JMFS061E11+           GTTCATCCACTTGCTCCATCAATGCCCCAAATTCATTGATTGCTTCTTGAGAAATCACAC
JMFS036E12+           GTTCATCCACTTGCTCCATCAATGCCCCAAATTCATTGATTGCTTCTTGAGAAATCACAC
JMFF037G24+           GTTCATCCACTTGCTCCATCAATGCCCCAAATTCATTGATTGCTTCTTGAGAAATCACAC
JMFS114H03+           GTTCATCCACTTGCTCCATCAATGCCCCAAATTCATTGATTGCTTCTTGAGAAATCACAC
                      ____________________________________________________________
consensus             GTTCATCCACTTGCTCCATCAATGCCCCAAATTCATTGATTGCTTCTTGAGAAATCACAC
 
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JMFS061E11+           ACATTTCTCCTGTTTCTTCCTCTTCTTTCACAGAAAAATGTAAGCCACAATTATT     
JMFS036E12+           ACATTTCTCCTGTTTCTTCCTCTTCTTTCACAGAAAAATGTAAGCCACAATTATT     
JMFF037G24+           ACATTTCTCCTGTTTCTTCCTCTTCTTTCACAGAAAAATGTAAGCCACAATTATTGAATT
JMFS114H03+           ACATTTCTCCTGTTTCTTCCTCTTCTTTCACAGAAAAATGTAAGCCACAATTATTGAATT
                      ____________________________________________________________
consensus             ACATTTCTCCTGTTTCTTCCTCTTCTTTCACAGAAAAATGTAAGCCACAATTATTGAATT
 
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JMFF037G24+           GCGAAAGAAAGAAAGAAAGAAAACAGCAGAGACCAAACTAGTACTTAGACCTCCCAC   
JMFS114H03+           GCGAAAGAAAGAAAGAAAGAAAACAGCAGAGACCAAACTAGTACTTAGACCTCCCACATT
                      ____________________________________________________________
consensus             GCGAAAGAAAGAAAGAAAGAAAACAGCAGAGACCAAACTAGTACTTAGACCTCCCACATT
 
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JMFS114H03+           TAAACTTTAAATCTTCCTTTATTATAATGACACTGTTAGTTAAAAGAAAGAAGCATAAAC
                      ____________________________________________________________
consensus             TAAACTTTAAATCTTCCTTTATTATAATGACACTGTTAGTTAAAAGAAAGAAGCATAAAC