Contig 000486:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF039H15Sequence470000486 (2)gb|AAD32141.1|AF123503_15e-95Nt-gh3 deduced protein [Nicotiana tabacum]617004097 (9)gb|ABN05326.1|5e-74GH3 protein [Rhodiola sachalinensis]
JMFS112E01Sequence627000486 (2)emb|CBI22502.3|7e-75unnamed protein product [Vitis vinifera]

Alignment

This contig is upended


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JMFF039H15+            TTGTGTAGGACACTTCTGAAGGCTTACACATGGGGTTGAGATTCAGGCCGAAATAACAC
                      ____________________________________________________________
consensus              TTGTGTAGGACACTTCTGAAGGCTTACACATGGGGTTGAGATTCAGGCCGAAATAACAC
 
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JMFF039H15+           TCCGACGAGGCGTACATGGTGCATGCCATCGGCAACCCGCCGCTGTAATAATCCAGCGTC
                      ____________________________________________________________
consensus             TCCGACGAGGCGTACATGGTGCATGCCATCGGCAACCCGCCGCTGTAATAATCCAGCGTC
 
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JMFF039H15+           GGAATATACTGCGCCATGGCTCCGGTGACGATCACGTCCAGATACTTCGTCCCCGGCCAA
                      ____________________________________________________________
consensus             GGAATATACTGCGCCATGGCTCCGGTGACGATCACGTCCAGATACTTCGTCCCCGGCCAA
 
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JMFF039H15+           ATTCTGGTGATAATTCCCTCCCAGTTCTCCTTCGAACATTCGCGGGCTATAAAGTCCGCC
                      ____________________________________________________________
consensus             ATTCTGGTGATAATTCCCTCCCAGTTCTCCTTCGAACATTCGCGGGCTATAAAGTCCGCC
 
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JMFF039H15+           AACTCCGGGTCGGGCCTCATAACCCGTGTCATGCACTCGCAGATTGCCGGGTCTGTCACA
JMFS112E01+                                            CACTCGCAGATTGCCGGGTCTGTCACA
                      ____________________________________________________________
consensus             AACTCCGGGTCGGGCCTCATAACCCGTGTCATGCACTCGCAGATTGCCGGGTCTGTCACA
 
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JMFF039H15+           TGCGGGCTCAGAATTCCGGTCCGGATGTCGTTACTCAACTGCGGCCAGTGTAGCTGGAGG
JMFS112E01+           TGCGGGCTCAGAATTCCGGTCCGGATGTCGTTACTCAACTGCGGCCAGTGTAGCTGGAGG
                      ____________________________________________________________
consensus             TGCGGGCTCAGAATTCCGGTCCGGATGTCGTTACTCAACTGCGGCCAGTGTAGCTGGAGG
 
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JMFF039H15+           AACCTGATGGCCCGGAGAAGCCCCGAAGCAAAAATCGCGCCAAGTCGAAGCACTTGCTCC
JMFS112E01+           AACCTGATGGCCCGGAGAAGCCCCGAAGCAAAAATCGCGCCAAGTCGAAGCACTTGCTCC
                      ____________________________________________________________
consensus             AACCTGATGGCCCGGAGAAGCCCCGAAGCAAAAATCGCGCCAAGTCGAAGCACTTGCTCC
 
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JMFF039H15+           CGCTCGTAGAGCCCGCAAAGCATTTGCGTGTACATACTCTGGAAAGAGTCC         
JMFS112E01+           CGCTCGTAGAGCCCGCAAAGCATTTGCGTGTACATACTCTGGAAAGAGTCCGGGCAAAGT
                      ____________________________________________________________
consensus             CGCTCGTAGAGCCCGCAAAGCATTTGCGTGTACATACTCTGGAAAGAGTCCGGGCAAAGT
 
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JMFS112E01+           ATGGCTTCATTCGGGCTGGTGTAGACGTTATACGGGTCGTAAGCCCGGGTCCTGAAGTGC
                      ____________________________________________________________
consensus             ATGGCTTCATTCGGGCTGGTGTAGACGTTATACGGGTCGTAAGCCCGGGTCCTGAAGTGC
 
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JMFS112E01+           TCACTCTTGTAGTAGCTGGTAAGAACGGGCCGGGCCACAAGCCCTCCCGGCGTCTTCGTC
                      ____________________________________________________________
consensus             TCACTCTTGTAGTAGCTGGTAAGAACGGGCCGGGCCACAAGCCCTCCCGGCGTCTTCGTC
 
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JMFS112E01+           TCAGACTTCACAAACATGAAGTATAACCCCTTTCCCTTGTTTAATCCAGGCACGTAACTG
                      ____________________________________________________________
consensus             TCAGACTTCACAAACATGAAGTATAACCCCTTTCCCTTGTTTAATCCAGGCACGTAACTG
 
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JMFS112E01+           TTACATACACAAAACAAGCAAAATATTATTAGAATATAATAAAAACACTAAAATAACTTA
                      ____________________________________________________________
consensus             TTACATACACAAAACAAGCAAAATATTATTAGAATATAATAAAAACACTAAAATAACTTA
 
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JMFS112E01+           AGTTATTCGTAACTATTTAATCTGACGAATTTGGCTGGGGTTATATTAATATTTTTTACT
                      ____________________________________________________________
consensus             AGTTATTCGTAACTATTTAATCTGACGAATTTGGCTGGGGTTATATTAATATTTTTTACT
 
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JMFS112E01+           TGAGTTAAATACTTACAGGTTCATAACAGGCATGAGAAGGCTGTAAAGAAGTTGACGACG
                      ____________________________________________________________
consensus             TGAGTTAAATACTTACAGGTTCATAACAGGCATGAGAAGGCTGTAAAGAAGTTGACGACG
 
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JMFS112E01+           ATCCAGCTCCTCTTTGATTGTGGGCATCAATTTTCTCTCGCCAGCTGACGTTCCAGAGCT
                      ____________________________________________________________
consensus             ATCCAGCTCCTCTTTGATTGTGGGCATCAATTTTCTCTCGCCAGCTGACGTTCCAGAGCT