Contig 000473:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF038N05Sequence714000473 (8)ref|XP_011091372.1|2e-50PREDICTED: beta-amylase 1, chloroplastic [Sesamum indicum]
JMFF038N06Sequence214000473 (8)emb|CDP21294.1|6e-29unnamed protein product [Coffea canephora]
JMFS003C03Sequence513000473 (8)ref|XP_011091372.1|3e-37PREDICTED: beta-amylase 1, chloroplastic [Sesamum indicum]
JMFS064F07Sequence480000473 (8)ref|XP_011091372.1|2e-31PREDICTED: beta-amylase 1, chloroplastic [Sesamum indicum]
JMFS066A04Sequence598000473 (8)ref|XP_011091372.1|2e-59PREDICTED: beta-amylase 1, chloroplastic [Sesamum indicum]
JMFS100B06Sequence505000473 (8)ref|XP_011091372.1|7e-37PREDICTED: beta-amylase 1, chloroplastic [Sesamum indicum]
JMFS127C02Sequence517000473 (8)gb|EYU43788.1|2e-93hypothetical protein MIMGU_mgv1a021359mg, partial [Erythranthe guttata]
JMSF048M06Sequence129024286560000473 (8)ref|XP_011091372.1|4e-46PREDICTED: beta-amylase 1, chloroplastic [Sesamum indicum]

Alignment

This contig is upended


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rJMFF038N05-             ATTTTCNATGCAATATTATTTTAANGGTANTCNTNCCTCTTTCTATCTTACACTATT
                      ____________________________________________________________
consensus                ATTTTCNATGCAATATTATTTTAANGGTANTCNTNCCTCTTTCTATCTTACACTATT
 
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rJMFF038N05-          ATACATTTTAAAATACAGAAGATCGAAATAAAAAAATAGAGATGATCGTGGTAGAGCTCT
                      ____________________________________________________________
consensus             ATACATTTTAAAATACAGAAGATCGAAATAAAAAAATAGAGATGATCGTGGTAGAGCTCT
 
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rJMFF038N06-                                             TGGCTGANTNATGTGCACAAAATGC
rJMFF038N05-          TCTTAATGCATGAGGGCGGCAGCTTCGTGCACCAATGGCTGAGTTATGTGCACAAAATGC
                      ____________________________________________________________
consensus             TCTTAATGCATGAGGGCGGCAGCTTCGTGCACCAATGGCTGAGTTATGTGCACAAAATGC
 
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rJMFF038N06-          TCAGCTTCCCGCTNCNATTCCTCCCANNACTTATGCACATCTTTACCTTCCTTCATTTTC
rJMFF038N05-          TCAGCTTCCCGCTCCAATTCCTCCCAACACTTATGCACATCTTTACCTTCCTTCATTTTC
                      ____________________________________________________________
consensus             TCAGCTTCCCGCTCCAATTCCTCCCAACACTTATGCACATCTTTACCTTCCTTCATTTTC
 
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rJMFF038N06-          TTCNCGANCGCCACAAACCTTCTCCAGTTATCANCCTGGAACAAATCTGGGTTCATTCTT
rJMFF038N05-          TTCACGAACGCCACAAACCTTCTCCAGTTATCAGCCTGGAACAAATCTGGGTTCATTCTT
                      ____________________________________________________________
consensus             TTCACGAACGCCACAAACCTTCTCCAGTTATCAGCCTGGAACAAATCTGGGTTCATTCTT
 
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rJMFF038N06-          AAGTAGGTGAACGCACACATTTCTCTATCACCCGACTTTTCNTCGATGCTCAATGCGGAA
rJMFF038N05-          AAGTAGGTGAACGCACACATTTCTCTATCACCCGACTTTTCGTCGATGCTCAATGCGGAA
                      ____________________________________________________________
consensus             AAGTAGGTGAACGCACACATTTCTCTATCACCCGACTTTTCGTCGATGCTCAATGCGGAA
 
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rJMFF038N05-          GTTCTGAGTATCTGTTCGTGCGCGTAATCGTCGTATCGTGGCAGCGCGTTCTCCCCGGGT
JMFS127C02+                                                                     GT
JMFS066A04+                                                          CCCCACCACACGT
                      ____________________________________________________________
consensus             GTTCTGAGTATCTGTTCGTGCGCGTAATCGTCGTATCGTGGCAGCGCGTTCTCCCCGGGT
 
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rJMFF038N05-          CCATCATCACCCCCTCAACTCCGGCGCTCTTCAGCGCCTGTAAGCTAGCATTCATCGCCT
JMFS003C03+                                                                     CT
rJMSF048M06+           CATCATCACNCCCTCAAGTCNGGCGNTGTTCAGCGCNNGTAAGNTAGCATTNATNGCCT
JMFS127C02+           CCATCATCACCCCCTCAACTCCGGCGCTCTTCAGCGCCTGTAAGCTAGCATTCATCGCCT
JMFS066A04+           CCATCATCACCCCCTCAACTCCGGCGCTCTTCAGCGCCTGTAAGCTAGCATTCATCGCCT
                      ____________________________________________________________
consensus             CCATCATCACCCCCTCAACTCCGGCGCTCTTCAGCGCCTGTAAGCTAGCATTCATCGCCT
 
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rJMFF038N05-          TCCTCCGGTTCATCGTGTGATCCATCTTAACCGAGTCCAACGG-ATCATCACGAACACCG
JMFS003C03+           TCCTCCGGTTCATCGTGTGATCCATCTTANCCNAGTCCACGCCCATCATCACNAACNCCG
rJMSF048M06+          TCNTCCGGTTCATNGTGTGATCCATCTTAACCGAGTCCAACGGCATCATCACGAACACCG
JMFS127C02+           TCCTCCGGTTCATCGTGTGATCCATCTTAACCGAGTCCAACGGCATCATCACGAACACCG
JMFS066A04+           TCCTCCGGTTCATCGTGTGATCCATCTTAACCGAGTCCAACGGCATCATCACGAACACCG
JMFS064F07+                                                                     CG
JMFS100B06+                                             GTCCAACGGCATCATCACGAACACCG
                      ____________________________________________________________
consensus             TCCTCCGGTTCATCGTGTGATCCATCTTAACCGAGTCCAACGGCATCATCACGAACACCG
 
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rJMFF038N05-          GAACCCCTTTACCCTTCTCATGCCCCAAATCCCCCATCTTATACTCTCTCTCCACTGTCG
JMFS003C03+           NAACCCCTTTACCCTTCTCATGCCCCAAATCCCCCATCTTATACTCTCTCTCCACTGTCG
rJMSF048M06+          GAACCCCTTTACCNTTCTCATGCNCCAAATCNCCCATCTTATACTCTCTNTNCACTGTCG
JMFS127C02+           GAACCCCTTTACCCTTCTCATGCCCCAAATCCCCCATCTTATACTCTCTCTCCACTGTCG
JMFS066A04+           GAACCCCTTTACCCTTCTCATGCCCCAAATCCCCCATCTTATACTCTCTCTCCACTGTCG
JMFS064F07+           GAACCCCTTTACCCTTCTCATGCCCCAAATCCCCCATCTTATACTCTCTCTCCACTGTCG
JMFS100B06+           GAACCCCTTTACCCTTCTCATGCCCCAAATCCCCCATCTTATACTCTCTCTCCACTGTCG
                      ____________________________________________________________
consensus             GAACCCCTTTACCCTTCTCATGCCCCAAATCCCCCATCTTATACTCTCTCTCCACTGTCG
 
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rJMFF038N05-          GCGCCTCCATTAACGCCTGGCACGCCGCTGTCAGATCCGGCCGCAAATCTCCCCTCATCG
JMFS003C03+           GCGCCTCCATTAACGCCTGGCACGCCGCTGTCAGATCCGGCCGCAAATCTCCCCTCATCG
rJMSF048M06+          GCGCNTCCATTAACGCGTGGCACGCCGCTGTCAGATCCGGCCGCAAATCTCCCCTCATCG
JMFS127C02+           GCGCCTCCATTAACGCCTGGCACGCCGCTGTCAGATCCGGCCGCAAATCTCCCCTCATCG
JMFS066A04+           GCGCCTCCATTAACGCCTGGCACGCCGCTGTCAGATCCGGCCGCAAATCTCCCCTCATCG
JMFS064F07+           GCGCCTCCATTAACGCCTGGCACGCCGCTGTCAGATCCGGCCGCAAATCTCCCCTCATCG
JMFS100B06+           GCGCCTCCATTAACGCCTGGCACGCCGCTGTCAGATCCGGCCGCAAATCTCCCCTCATCG
                      ____________________________________________________________
consensus             GCGCCTCCATTAACGCCTGGCACGCCGCTGTCAGATCCGGCCGCAAATCTCCCCTCATCG
 
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rJMFF038N05-          GACTAAGCGGCGGCGACGGTGACACGCGGTCCACCTCTGCTCCCGATTTCCGCACCGA  
JMFS003C03+           GACTAAGCGGCGGCGACGGTGACACGCGGTCCACCTCTGCTCCCGATTTCCGCACCGAAA
rJMSF048M06+          GACTAAGCGGCGGCGACGGTGACACGCGGTCCACCTNTGCTCCCGATTTCCGCACCGAAA
JMFS127C02+           GACTAAGCGGCGGCGACGGTGACAC                                   
JMFS066A04+           GACTAAGCGGCGGCGACGGTGACACGCGGTCCACCTCTGCTCCCGATTTCCGCACCGAAA
JMFS064F07+           GACTAAGCGGCGGCGACGGTGACACGCGGTCCACCTCTGCTCCCGATTTCCGCACCGAAA
JMFS100B06+           GACTAAGCGGCGGCGACGGTGACACGCGGTCCACCTCTGCTCCCGATTTCCGCACCGAAA
                      ____________________________________________________________
consensus             GACTAAGCGGCGGCGACGGTGACACGCGGTCCACCTCTGCTCCCGATTTCCGCACCGAAA
 
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JMFS003C03+           CTCGGAGATTCGTCGCTGGATTCTTCCAGAA-CGCCGGTGTTACCACAGACGCCTTTGCC
rJMSF048M06+          CTCGGAGATTNGTCGNTGGATTNTTCCAGAAGCGCCGGTGTTACCACAGACGCCTTTGCC
JMFS066A04+           CTCGGAGATTCGTCGCTGGATTCTTCCAGAA-CGCCGGTGTTACCACAGACGCCTTTGCC
JMFS064F07+           CTCGGAGATTCGTCGCTGGATTCTTCCAGAA-CGCCGGTGTTACCACAGACGCCTTTGCC
JMFS100B06+           CTCGGAGATTCGTCGCTGGATTCTTCCAGAA-CGCCGGTGTTACCACAGACGCCTTTGCC
                      ____________________________________________________________
consensus             CTCGGAGATTCGTCGCTGGATTCTTCCAGAA-CGCCGGTGTTACCACAGACGCCTTTGCC
 
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JMFS003C03+           GGTCCCTCCCCGGAGACTGTTCCCGTCTCCACTGCTATCGGTGTTCCGGAAATTGCAGTC
rJMSF048M06+          GGTCCCTCCCCGGAGACTGTTCCCGTCTCCANTGCTATCGGTGTTCCGGAAATTGCAGTC
JMFS066A04+           GGTCCCTCCCCGGAGACTGTTCCCGTCTCCACTGCTATCGGTGTTCCGGAAATTGCAGTC
JMFS064F07+           GGTCCCTCCCCGGAGACTGTTCCCGTCTCCACTGCTATCGGTGTTCCGGAAATTGCAGTC
JMFS100B06+           GGTCCCTCCCCGGAGACTGTTCCCGTCTCCACTGCTATCGGTGTTCCGGAAATTGCAGTC
                      ____________________________________________________________
consensus             GGTCCCTCCCCGGAGACTGTTCCCGTCTCCACTGCTATCGGTGTTCCGGAAATTGCAGTC
 
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JMFS003C03+           AGTTGGTGCGGTAAACTCATTGCCATATTATCCAGAAACAAACACCCCGAAATATTTGTA
rJMSF048M06+          AGNTGGTGCGGTAAACTCATTGCCATATTATCCAGAAACAAACACCCCGAAATAT     
JMFS066A04+           AGTTGGTGCGGTAAACTCATTGCCATATTATCCAGAAACAAACACCCCGAAATATTTGTA
JMFS064F07+           AGTTGGTGCGGTAAACTCATTGCCATATTATCCAGAAACAAACACCCCGAAATATTTGTA
JMFS100B06+           AGTTGGTGCGGTAAACTCATTGCCATATTATCCAGAAACAAACACCCCGAAATATTTGTA
                      ____________________________________________________________
consensus             AGTTGGTGCGGTAAACTCATTGCCATATTATCCAGAAACAAACACCCCGAAATATTTGTA
 
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JMFS003C03+           TAATTACTAAAAAA                                              
JMFS066A04+           TAATTACTAAAAAA                                              
JMFS064F07+           TAATTACTAAAAAA                                              
JMFS100B06+           TAATTACTAAAAAATGAAAATAAATAGTTTAAACTXXXXXXXXXXXXXXXXXXXXXXTTG
                      ____________________________________________________________
consensus             TAATTACTAAAAAATGAAAATAAATAGTTTAAACTNNNNNNNNNNNNNNNNNNNNNNTTG
 
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JMFS100B06+           TGATTCACAACGATCGATCTAAAATTTTTGTTTTTTGAGTGTTAAGATAATGTATTGAAG
                      ____________________________________________________________
consensus             TGATTCACAACGATCGATCTAAAATTTTTGTTTTTTGAGTGTTAAGATAATGTATTGAAG