Contig 000436:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS042B03Sequence609000436 (2)gb|KGN43279.1|4e-79hypothetical protein Csa_7G017130 [Cucumis sativus]
JMFS063B10Sequence613000436 (2)gb|KGN43279.1|9e-80hypothetical protein Csa_7G017130 [Cucumis sativus]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS042B03+ TAGCCTTTT
JMFS063B10+ AGCTTAGCCTTTT
                      ____________________________________________________________
consensus AGCTTAGCCTTTT
 
. : . : . : . : . : . :
JMFS042B03+ CCACATTGACATTAGGTGCCATTGTGGCTTCTAAGACAACCCTGGCTTCTAAGATTGCCC
JMFS063B10+ CCACATTGACATTAGGTGCCATTGTGGCTTCTAAGACAACCCTGGCTTCTAAGATTGCCC
                      ____________________________________________________________
consensus CCACATTGACATTAGGTGCCATTGTGGCTTCTAAGACAACCCTGGCTTCTAAGATTGCCC
 
. : . : . : . : . : . :
JMFS042B03+ TATTTGCAGTCTCATAATGACCAGCAGAGCGACAAAGCTTTGCATATTGTATCCAACAAT
JMFS063B10+ TATTTGCAGTCTCATAATGACCAGCAGAGCGACAAAGCTTTGCATATTGTATCCAACAAT
                      ____________________________________________________________
consensus TATTTGCAGTCTCATAATGACCAGCAGAGCGACAAAGCTTTGCATATTGTATCCAACAAT
 
. : . : . : . : . : . :
JMFS042B03+ TCCCAACTGAAGCCCTGACACCACTAGCACAAAAAACAAGCCTCCGGAAAGCCAAAAGTG
JMFS063B10+ TCCCAACTGAAGCCCTGACACCACTAGCACAAAAAACAAGCCTCCGGAAAGCCAAAAGTG
                      ____________________________________________________________
consensus TCCCAACTGAAGCCCTGACACCACTAGCACAAAAAACAAGCCTCCGGAAAGCCAAAAGTG
 
. : . : . : . : . : . :
JMFS042B03+ GCTCCCTTGCCCAGAGAGATGGTTGAGTGAGTTTGAGTCGGTTTTCCCAGTTTTCCGTTA
JMFS063B10+ GCTCCCTTGCCCAGAGAGATGGTTGAGTGAGTTTGAGTCGGTTTTCCCAGTTTTCCGTTA
                      ____________________________________________________________
consensus GCTCCCTTGCCCAGAGAGATGGTTGAGTGAGTTTGAGTCGGTTTTCCCAGTTTTCCGTTA
 
. : . : . : . : . : . :
JMFS042B03+ GTTTTGGGAACTGTAGTTCATCAAGATGTAATGATTTTTCCAAAAAAAGATTCACCTCCA
JMFS063B10+ GTTTTGGGAACTGTAGTTCATCAAGATGTAATGATTTTTCCAAAAAAAGATTCACCTCCA
                      ____________________________________________________________
consensus GTTTTGGGAACTGTAGTTCATCAAGATGTAATGATTTTTCCAAAAAAAGATTCACCTCCA
 
. : . : . : . : . : . :
JMFS042B03+ AGAAGAAAGTTGAATTCCTCCAACTCCCGTAGCATGTGAAGCTTTACAACAAATGGGTAA
JMFS063B10+ AGAAGAAAGTTGAATTCCTCCAACTCCCGTAGCATGTGAAGCTTTACAACAAATGGGTAA
                      ____________________________________________________________
consensus AGAAGAAAGTTGAATTCCTCCAACTCCCGTAGCATGTGAAGCTTTACAACAAATGGGTAA
 
. : . : . : . : . : . :
JMFS042B03+ GCCCGTGCATAAGAATCCATGCCAGCAGCAGCCAAAGGGCCAATCAAAGCTTGCTTGGAC
JMFS063B10+ GCCCGTGCATAAGAATCCATGCCAGCAGCAGCCAAAGGGCCAATCAAAGCTTGCTTGGAC
                      ____________________________________________________________
consensus GCCCGTGCATAAGAATCCATGCCAGCAGCAGCCAAAGGGCCAATCAAAGCTTGCTTGGAC
 
. : . : . : . : . : . :
JMFS042B03+ AATGCAATTTTCTCATCAACAGAGAATTGATCTTTCTTCATCATCGCTTGAAGAATCTTT
JMFS063B10+ AATGCAATTTTCTCATCAACAGAGAATTGATCTTTCTTCATCATCGCTTGAAGAATCTTT
                      ____________________________________________________________
consensus AATGCAATTTTCTCATCAACAGAGAATTGATCTTTCTTCATCATCGCTTGAAGAATCTTT
 
. : . : . : . : . : . :
JMFS042B03+ GCAACATCCATGTCAAATGAAGCATTACTCTCAGCGCTGCTGCAAATTAAACCTTCTTTA
JMFS063B10+ GCAACATCCATGTCAAATGAAGCATTACTCTCAGCGCTGCTGCAAATTAAACCTTCTTTA
                      ____________________________________________________________
consensus GCAACATCCATGTCAAATGAAGCATTACTCTCAGCGCTGCTGCAAATTAAACCTTCTTTA
 
. : . : . : . : . : . :
JMFS042B03+ TCAGCCCCGTTGAGGTACTCATCCATCAAGTCCCATCTGCCAAGTCTCCATGCAGCCTGA
JMFS063B10+ TCAGCCCCGTTGAGGTACTCATCCATCAAGTCCCATCTGCCAAGTCTCCATGCAGCCTGA
                      ____________________________________________________________
consensus TCAGCCCCGTTGAGGTACTCATCCATCAAGTCCCATCTGCCAAGTCTCCATGCAGCCTGA