Contig 000435:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS007B12Sequence636000435 (5)gb|AAG49585.1|AF325496_15e-135phenylalanine ammonia-lyase [Ipomoea nil]
JMFS062E09Sequence152000435 (5)gb|AAG49585.1|AF325496_11e-14phenylalanine ammonia-lyase [Ipomoea nil]
JMFS080A01Sequence616000435 (5)gb|AAG49585.1|AF325496_11e-138phenylalanine ammonia-lyase [Ipomoea nil]
JMFS086A10Sequence627000435 (5)gb|AAG49585.1|AF325496_11e-128phenylalanine ammonia-lyase [Ipomoea nil]
JMFS102F02Sequence601000435 (5)gb|AAG49585.1|AF325496_19e-123phenylalanine ammonia-lyase [Ipomoea nil]

Alignment

This contig is upended


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JMFS086A10+                                                              GCGAAGATT
                      ____________________________________________________________
consensus                                                                GCGAAGATT
 
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JMFS086A10+           GCGAAGAGAACCTCCGACAAAACCGCGAGGACGTTGGCCTCGAAGAGAACCATGGACGCC
                      ____________________________________________________________
consensus             GCGAAGAGAACCTCCGACAAAACCGCGAGGACGTTGGCCTCGAAGAGAACCATGGACGCC
 
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JMFS086A10+           ATGCCGGACCCCACCGCGGTTCCGTTCACGAGCGCCAGCCCTTCCTTGGGCTGCAGCTCA
                      ____________________________________________________________
consensus             ATGCCGGACCCCACCGCGGTTCCGTTCACGAGCGCCAGCCCTTCCTTGGGCTGCAGCTCA
 
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JMFS086A10+           AAGAATCCGACGTCAAGGCCGGCGGCGCGGAAGGCCTGTTCAGCGGTGAGGGAATCTCCG
                      ____________________________________________________________
consensus             AAGAATCCGACGTCAAGGCCGGCGGCGCGGAAGGCCTGTTCAGCGGTGAGGGAATCTCCG
 
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JMFS086A10+           TTGGGGCCCGCCGCCTTGGAATTGGGGCGGCCGGTGAGCAGACCGGCGATGTAGGATAAG
                      ____________________________________________________________
consensus             TTGGGGCCCGCCGCCTTGGAATTGGGGCGGCCGGTGAGCAGACCGGCGATGTAGGATAAG
 
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JMFS086A10+           GGGACGAGGTCGCCGGAGGCGGTGATGGTGCCGCGGAGGGGCAAGCATGGGGTGATGTTG
JMFS007B12+                       CCGGAGGCAGTGATTGTGCCACGGAGGGGCAGGCAGGGGGTAATGTTG
JMFS080A01+              ACAAGGTCACCGAAGGCAGTGATTGTGCCACGGAGGGGCAGGCAGGGGGTAATGTTG
                      ____________________________________________________________
consensus             GGGACGAGGTCGCCGGAGGCAGTGATTGTGCCACGGAGGGGCAGGCAGGGGGTAATGTTG
 
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JMFS086A10+           TGGTTGAGGAATTTGGTTATGGCTTCCAAGATCTCAAACCTTATCCCTGAGTAGCCTTGA
JMFS007B12+           TGGTTCAGCAATTTAGTGATTGCTTCCAAGATTTCAAATCTAATGCCAGAGTATCCTTGA
JMFS102F02+           TGGTTCAGCAATTTAGTGATTGCTTCCAAGATTTCAAATCTAATGCCAGAGTATCCTTGA
JMFS080A01+           TGGTTCAGCAATTTAGTGATTGCTTCCAAGATTTCAAATCTAATGCCAGAGTATCCTTGA
                      ____________________________________________________________
consensus             TGGTTCAGCAATTTAGTGATTGCTTCCAAGATTTCAAATCTAATGCCAGAGTATCCTTGA
 
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JMFS086A10+           AGAAGGGTGTTGATTCTCACAAGCATGGCGGCCCTGGTTGCAGAGTGTGGCAGCGTGTGA
JMFS007B12+           AGAAGGGTGTTGATTCTGACAAGCATGGCGGCTCTTGTTGCTGAATGGGGAAGAGTGTGA
JMFS102F02+           AGAAGGGTGTTGATTCTGACAAGCATGGCGGCTCTTGTTGCTGAATGGGGAAGAGTGTGA
JMFS080A01+           AGAAGGGTGTTGATTCTGACAAGCATGGCGGCTCTTGTTGCTGAATGGGGAAGAGTGTGA
                      ____________________________________________________________
consensus             AGAAGGGTGTTGATTCTGACAAGCATGGCGGCTCTTGTTGCTGAATGGGGAAGAGTGTGA
 
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JMFS086A10+           CATGAATCTCCTCCATTTCCAAAGATTCCGGCATTCAAAAACCTAATGAGCTCCTTCTGA
JMFS007B12+           CATGATTCTGTTCCATTGCCGAATATTCCAGCATTCAAAAACCTAATGAGCTCCTTCTGA
JMFS102F02+           CATGATTCTGTTCCATTGCCGAATATTCCAGCATTCAAAAACCTAATGAGCTCCTTCTGA
JMFS080A01+           CATGATTCTGTTCCATTGCCGAATATTCCAGCATTCAAAAACCTAATGAGCTCCTTCTGA
                      ____________________________________________________________
consensus             CATGATTCTGTTCCATTGCCGAATATTCCAGCATTCAAAAACCTAATGAGCTCCTTCTGA
 
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JMFS086A10+           AGAGCGCCGCCCTGCTTGGTGCGGCGGTGGGAGGTGGCGCCGAAGCCGGTGGTGACACCA
JMFS007B12+           AGAGCGCCACCTTGTTTGGTTCTACGGTGAGAGGTGGCGCCGAAGCCGGTGGTGACGCCG
JMFS102F02+           AGAGCGCCACCTTGTTTGGTTCTACGGTGAGAGGTGGCGCCGAAGCCGGTGGTGACGCCG
JMFS080A01+           AGAGCGCCACCTTGTTTGGTTCTACGGTGAGAGGTGGCGCCGAAGCCGGTGGTGACGCCG
                      ____________________________________________________________
consensus             AGAGCGCCACCTTGTTTGGTTCTACGGTGAGAGGTGGCGCCGAAGCCGGTGGTGACGCCG
 
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JMFS086A10+           TAGCTATCAGTGCCTTTGCCCATGCTCTCCATCACCCAATCACTGCTAGCCTTAACGCCG
JMFS007B12+           TAGCTATCAGTCCCTTTGTTCATGCTATCCATCACCCAATCACTGCTGGCCTTAACGCCG
JMFS102F02+           TAGCTATCAGTCCCTTTGTTCATGCTATCCATCACCCAATCACTGCTGGCCTTAACGCCG
JMFS080A01+           TAGCTATCAGTCCCTTTGTTCATGCTATCCATCACCCAATCACTGCTGGCCTTAACGCCG
                      ____________________________________________________________
consensus             TAGCTATCAGTCCCTTTGTTCATGCTATCCATCACCCAATCACTGCTGGCCTTAACGCCG
 
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JMFS086A10+           GC                                                          
JMFS007B12+           GCGCGGGACTCCTCGGAGAGCTCCACCGTGACGGCATTGTCGCGGGAGGCGATAGCTGCC
JMFS102F02+           GCGCGGGACTCCTCGGAGAGCTCCACCGTGACGGCATTGTCGCGGGAGGCGATAGCTGCC
JMFS080A01+           GCGCGGGACTCCTCGGAGAGCTCCACCGTGACGGCATTGTCGCGGGAGGCGATAGCTGCC
                      ____________________________________________________________
consensus             GCGCGGGACTCCTCGGAGAGCTCCACCGTGACGGCATTGTCGCGGGAGGCGATAGCTGCC
 
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JMFS007B12+           ACCTGAGCCACCGTGAGCGTCTCTCCGCCGAGCTTCACCGCCGGCTTCCTAAACTCGGCC
JMFS102F02+           ACCTGAGCCACCGTGAGCGTCTCTCCGCCGAGCTTCACCGCCGGCTTCCTAAACTCGGCC
JMFS080A01+           ACCTGAGCCACCGTGAGCGTCTCTCCGCCGAGCTTCACCGCCGGCTTCCTAAACTCGGCC
                      ____________________________________________________________
consensus             ACCTGAGCCACCGTGAGCGTCTCTCCGCCGAGCTTCACCGCCGGCTTCCTAAACTCGGCC
 
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JMFS007B12+           ACCATGCGTTTCACTTCATCCAGGTGGCTCCCCCTCAATGAGTCGGCAGCCACCTCCCAG
JMFS102F02+           ACCATGCGTTTCACTTCATCCAGGTGGCTCCCCCTCAATGAGTCGGCAGCCACCTCCCAG
JMFS080A01+           ACCATGCGTTTCACTTCATCCAGGTGGCTCCCCCTCAATGAGTCGGCAGCCACCTCCCAG
JMFS062E09+                                       TCCCCCTCAATGAGTCGGCAGCCACCTCCCAG
                      ____________________________________________________________
consensus             ACCATGCGTTTCACTTCATCCAGGTGGCTCCCCCTCAATGAGTCGGCAGCCACCTCCCAG
 
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JMFS007B12+           TTCAAAGGATCAACCTTGACGCAGAA                                  
JMFS102F02+           TTCAAAGGATCAACCTTGACGCAGAA                                  
JMFS080A01+           TTCAAAGGATCAACCTTGACGCAGAAGCCATTTTGGTGGCCATTATTCTGCAGCTTCACT
JMFS062E09+           TTCAAAGGATCAACCTTGACGCAGAAGCCATTTTGGTGGCCATTATTCTGCAGCTTCACT
                      ____________________________________________________________
consensus             TTCAAAGGATCAACCTTGACGCAGAAGCCATTTTGGTGGCCATTATTCTGCAGCTTCACT
 
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JMFS080A01+           GAGTCCATATTAGT                                              
JMFS062E09+           GAGTCCATATTAGTTATTGGGCGTGGGGGACGGGAAGGGACGAATAAAGAATTTTATTGA
                      ____________________________________________________________
consensus             GAGTCCATATTAGTTATTGGGCGTGGGGGACGGGAAGGGACGAATAAAGAATTTTATTGA