Contig 000429:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS054G05Sequence632000429 (3)ref|XP_004244420.1|107PREDICTED: disease resistance protein RPM1-like [Solanum lycopersicum]
JMFS057B06Sequence636000429 (3)ref|XP_004244420.1|107PREDICTED: disease resistance protein RPM1-like [Solanum lycopersicum]
JMSF024F13Sequence696000475 (5)ref|XP_006361250.1|268PREDICTED: disease resistance protein RPM1-like [Solanum tuberosum]685000429 (3)ref|XP_004244420.1|83.6PREDICTED: disease resistance protein RPM1-like [Solanum lycopersicum]

Alignment

This contig is upended


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rJMSF024F13-                                                   TATGGCAACACCCTTAACC
                      ____________________________________________________________
consensus                                                      TATGGCAACACCCTTAACC
 
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rJMSF024F13-          AAATGATGAAAACAGATCAAAACAGTTCTTGGGCAAATGGAACATATTACATATGGAAGT
                      ____________________________________________________________
consensus             AAATGATGAAAACAGATCAAAACAGTTCTTGGGCAAATGGAACATATTACATATGGAAGT
 
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rJMSF024F13-          GAATTTCACTTTGGTAACATTAAAACAAAAAGCAGAAACTAATGTTGCAAATGAGATGTT
JMFS054G05+                                       AAAGCAGAAACTAATGTTGCAAATGAGATGTT
JMFS057B06+                                       AAAGCAGAAACTAATGTTGCAAATGAGATGTT
                      ____________________________________________________________
consensus             GAATTTCACTTTGGTAACATTAAAACAAAAAGCAGAAACTAATGTTGCAAATGAGATGTT
 
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rJMSF024F13-          CGGCTTACGGGAGATTGTCCAAGCAAGCTAGCTCGCTGGCGTTCAAGAACGACCAGTCCC
JMFS054G05+           CGGCTTACGGGAGATTGTCCAAGCAAGCTAGCTCGCTGGCGTTCAAGAACGACCAGTCCC
JMFS057B06+           CGGCTTACGGGAGATTGTCCAAGCAAGCTAGCTCGCTGGCGTTCAAGAACGACCAGTCCC
                      ____________________________________________________________
consensus             CGGCTTACGGGAGATTGTCCAAGCAAGCTAGCTCGCTGGCGTTCAAGAACGACCAGTCCC
 
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rJMSF024F13-          TCAGTTGCATTACATCCTAGCTTCATCGAATGACATGCGAACGAGAGTCTCAAAACTAGG
JMFS054G05+           TCAGTTGCATTACATCCTAGCTTCATCGAATGACATGCGAACGAGAGTCTCAAAACTAGG
JMFS057B06+           TCAGTTGCATTACATCCTAGCTTCATCGAATGACATGCGAACGAGAGTCTCAAAACTAGG
                      ____________________________________________________________
consensus             TCAGTTGCATTACATCCTAGCTTCATCGAATGACATGCGAACGAGAGTCTCAAAACTAGG
 
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rJMSF024F13-          GCATTACAATGAGAAAGGCAATAGGAATAAGAGCATTCAATACAGACCAGGCTTTTATTT
JMFS054G05+           GCATTACAATGAGAAAGGCAATAGGAATAAGAGCATTCAATACAGACCAGGCTTTTATTT
JMFS057B06+           GCATTACAATGAGAAAGGCAATAGGAATAAGAGCATTCAATACAGACCAGGCTTTTATTT
                      ____________________________________________________________
consensus             GCATTACAATGAGAAAGGCAATAGGAATAAGAGCATTCAATACAGACCAGGCTTTTATTT
 
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rJMSF024F13-          TGGGTGCACTAAAATTGACATTTTTACAGCTGCCGGAGCAAATAGGATCAAATAACCAGC
JMFS054G05+           TGGGTGCACTAAAATTGACATTTTTACAGCTGCCGGAGCAAATAGGATCAAATAACCAGC
JMFS057B06+           TGGGTGCACTAAAATTGACATTTTTACAGCTGCCGGAGCAAATAGGATCAAATAACCAGC
                      ____________________________________________________________
consensus             TGGGTGCACTAAAATTGACATTTTTACAGCTGCCGGAGCAAATAGGATCAAATAACCAGC
 
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rJMSF024F13-          TTCTGGGGTCTGCAGATCTTGAATGAAATCACTGATCCAACAACAGAAGGATTCACGATA
JMFS054G05+           TTCTGGGGTCTGCAGATCTTGAATGAAATCACTGATCCAACAACAGAAGGATTCACGATA
JMFS057B06+           TTCTGGGGTCTGCAGATCTTGAATGAAATCACTGATCCAACAACAGAAGGATTCACGATA
                      ____________________________________________________________
consensus             TTCTGGGGTCTGCAGATCTTGAATGAAATCACTGATCCAACAACAGAAGGATTCACGATA
 
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rJMSF024F13-          TTACAAATGGCAAGATTCTGTCTCAGTACGGTACTTGATGGATGGAATATGCCTGATCTT
JMFS054G05+           TTACAAATGGCAAGATTCTGTCTCAGTACGGTACTTGATGGATGGAATATGCCTGATCTT
JMFS057B06+           TTACAAATGGCAAGATTCTGTCTCAGTACGGTACTTGATGGATGGAATATGCCTGATCTT
                      ____________________________________________________________
consensus             TTACAAATGGCAAGATTCTGTCTCAGTACGGTACTTGATGGATGGAATATGCCTGATCTT
 
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rJMSF024F13-          TGGACGATCAATGCCATCGCCTCCAATACGTTGTATGAACTCTCCTGAAACTCCTTTCAA
JMFS054G05+           TGGACGATCAATGCCATCGCCTCCAATACGTTGTATGAACTCTCCTGAAACTCCTTTCAA
JMFS057B06+           TGGACGATCAATGCCATCGCCTCCAATACGTTGTATGAACTCTCCTGAAACTCCTTTCAA
                      ____________________________________________________________
consensus             TGGACGATCAATGCCATCGCCTCCAATACGTTGTATGAACTCTCCTGAAACTCCTTTCAA
 
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rJMSF024F13-          GTCCAGTGCTTCAAGGCTGGTAAGGTATTCAATACCTTGGGGCACCTTGTTCAGTTTAGG
JMFS054G05+           GTCCAGTGCTTCAAGGCTGGTAAGGTATTCAATACCTTGGGGCACCTTGTTCAGTTTAGG
JMFS057B06+           GTCCAGTGCTTCAAGGCTGGTAAGGTATTCAATACCTTGGGGCACCTTGTTCAGTTTAGG
                      ____________________________________________________________
consensus             GTCCAGTGCTTCAAGGCTGGTAAGGTATTCAATACCTTGGGGCACCTTGTTCAGTTTAGG
 
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rJMSF024F13-          ACACGAATGTATATTCAGGCATTCGAGCCTGGGCATCACTCCCTTTGAGAATACGATTTC
JMFS054G05+           ACACGAATGTATATTCAGGCATTCGAGCCTGGGCATCACTCCCTTTGAGAATACGATTTC
JMFS057B06+           ACACGAATGTATATTCAGGCATTCGAGCCTGGGCATCACTCCCTTTGAGAATACGATTTC
                      ____________________________________________________________
consensus             ACACGAATGTATATTCAGGCATTCGAGCCTGGGCATCACTCCCTTTGAGAATACGATTTC
 
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rJMSF024F13-          TACTAA                                                      
JMFS054G05+           TACTAAATCAGGGAAAACTGCAAGGTGTAAGTCCTCGAGCTTTAGGAATCCAGAATTGAA
JMFS057B06+           TACTAAATCAGGGAAAACTGCAAGGTGTAAGTCCTCGAGCTTTAGGAATCCAGAATTGAA
                      ____________________________________________________________
consensus             TACTAAATCAGGGAAAACTGCAAGGTGTAAGTCCTCGAGCTTTAGGAATCCAGAATTGAA