| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF043K17 | Sequence | 647 | 000423 (7) | ref|XP_007035550.1| | 2e-110 | Cullin 1 isoform 2 [Theobroma cacao] gb|EOY06476.1| Cullin 1 isoform 2 [Theobrom | 612 | 011164 (5) | |||
| JMFS028B06 | Sequence | 656 | 000423 (7) | ref|XP_007035550.1| | 3e-91 | Cullin 1 isoform 2 [Theobroma cacao] gb|EOY06476.1| Cullin 1 isoform 2 [Theobrom | |||||
| JMFS049E12 | Sequence | 621 | 000423 (7) | ref|XP_009594442.1| | 1e-104 | PREDICTED: cullin-1 isoform X3 [Nicotiana tomentosiformis] | |||||
| JMFS092A03 | Sequence | 627 | 000423 (7) | ref|XP_007035550.1| | 1e-113 | Cullin 1 isoform 2 [Theobroma cacao] gb|EOY06476.1| Cullin 1 isoform 2 [Theobrom | |||||
| JMFS093G05 | Sequence | 612 | 000423 (7) | ref|XP_009594442.1| | 4e-100 | PREDICTED: cullin-1 isoform X3 [Nicotiana tomentosiformis] | |||||
| JMFS104H03 | Sequence | 617 | 000423 (7) | ref|XP_007035550.1| | 5e-84 | Cullin 1 isoform 2 [Theobroma cacao] gb|EOY06476.1| Cullin 1 isoform 2 [Theobrom | |||||
| JMFS153E04 | Sequence | 619 | 000423 (7) | ref|XP_009594442.1| | 5e-116 | PREDICTED: cullin-1 isoform X3 [Nicotiana tomentosiformis] | |||||
This contig is upended
. : . : . : . : . : . :
JMFS153E04+ C
____________________________________________________________
consensus C
. : . : . : . : . : . :
JMFS153E04+ TTCAATAATGCTCTATCAATCTGCTCACCCTCACGCTCTTGATCAATCAGAGATATAACA
JMFS092A03+ ATAATGCTCTATCAATCTGCTCACCCTCACGCTCTTGATCAATCAGAGATATAACA
JMFF043K17+ TATCAATCTGCTCACCCTCACGCTCTGNATCAATCAGAGATATAACA
JMFS093G05+ A
JMFS049E12+ ATCAATCAGAGATATAACA
____________________________________________________________
consensus TTCAATAATGCTCTATCAATCTGCTCACCCTCACGCTCTTGATCAATCAGAGATATAACA
. : . : . : . : . : . :
JMFS153E04+ GCATCCCTTATTTTGCTATTCAACTCTAGGTACACCAGATCACGGAAGCATGTTAACCCA
JMFS092A03+ GCATCCCTTATTNTGCTATTCAACTCTAGGTACACCAGATCACGGAAGCATGTTAACCCA
JMFF043K17+ GCATCCCTTATTNTGCTATTCAACTCTAGGTACACCAGATCACGGAAGCATGTTAACCCA
JMFS093G05+ GCATCCCTTATTNTGCTATTCAACTCTAGGTACACCAGATCACGGAAGCATGTTAACCCA
JMFS028B06+ CGGAAGCATGTTAACCCA
JMFS049E12+ GCATCCCTTATTNTGCTATTCAACTCTAGGTACACCAGATCACGGAAGCATGTTAACCCA
____________________________________________________________
consensus GCATCCCTTATTTTGCTATTCAACTCTAGGTACACCAGATCACGGAAGCATGTTAACCCA
. : . : . : . : . : . :
JMFS153E04+ ACTTCATTGAGAGCTGGTAGGGATCTCCGAGCAATGAAATAGCGATCTAGATAATGGAAG
JMFS092A03+ ACTTCATTGAGAGCTGGTAGGGATCTCCGAGCAATGAAATAGCGATCTAGATAATGGAAG
JMFF043K17+ ACTTCATTGAGAGCTGGTAGGGATCTCCGAGCAATGAAATAGCGATCTAGATAATGGAAG
JMFS093G05+ ACTTCATTGAGAGCTGGTAGGGATCTCCGAGCAATGAAATAGCGATCTAGATAATGGAAG
JMFS028B06+ ACTTCATTGAGAGCTGGTAGGGATCTCCGAGCAATGAAATAGCGATCTAGATAATGGAAG
JMFS104H03+ AGCTGGTAGGGATCTCCGAGCAATGAAATAGCGATCTAGATAATGGAAG
JMFS049E12+ ACTTCATTGAGAGCTGGTAGGGATCTCCGAGCAATGAAATAGCGATCTAGATAATGGAAG
____________________________________________________________
consensus ACTTCATTGAGAGCTGGTAGGGATCTCCGAGCAATGAAATAGCGATCTAGATAATGGAAG
. : . : . : . : . : . :
JMFS153E04+ AATCTCGACAACCATCTCACCATGATTTTATGGTTTAACCACCTTTTCACCAACTCTCTT
JMFS092A03+ AATCTCGACAACCATCTCACCATGATTTTATGGTTTAACCACCTTTTCACCAACTCTCTT
JMFF043K17+ AATCTCGACAACCATCTCACCATGATTTTATGGTTTAACCACCTTTTCACCAACTCTCTT
JMFS093G05+ AATCTCGACAACCATCTCACCATGATTTTATGGTTTAACCACCTTTTCACCAACTCTCTT
JMFS028B06+ AATCTCGACAACCATCTCACCATGATTTTATGGTTTAACCACCTTTTCACCAACTCTCTT
JMFS104H03+ AATCTCGACAACCATCTCACCATGATTTTATGGTTTAACCACCTTTTCACCAACTCTCTT
JMFS049E12+ AATCTCGACAACCATCTCACCATGATTTTATGGTTTAACCACCTTTTCACCAACTCTCTT
____________________________________________________________
consensus AATCTCGACAACCATCTCACCATGATTTTATGGTTTAACCACCTTTTCACCAACTCTCTT
. : . : . : . : . : . :
JMFS153E04+ AGCATAAATTCATCATGCTTCTCTCTCAAAGAAGGCAACACCGTTAATGTGATGTATTCC
JMFS092A03+ AGCATAAATTCATCATGCTTCTCTCTCAAAGAAGGCAACACCGTTAATGTGATGTATTCC
JMFF043K17+ AGCATAAATTCATCATGCTTCTCTCTCAAAGAAGGCAACACCGTTAATGTGATGTATTCC
JMFS093G05+ AGCATAAATTCATCATGCTTCTCTCTCAAAGAAGGCAACACCGTTAATGTGATGTATTCC
JMFS028B06+ AGCATAAATTCATCATGCTTCTCTCTCAAAGAAGGCAACACCGTTAATGTGATGTATTCC
JMFS104H03+ AGCATAAATTCATCATGCTTCTCTCTCAAAGAAGGCAACACCGTTAATGTGATGTATTCC
JMFS049E12+ AGCATAAATTCATCATGCTTCTCTCTCAAAGAAGGCAACACCGTTAATGTGATGTATTCC
____________________________________________________________
consensus AGCATAAATTCATCATGCTTCTCTCTCAAAGAAGGCAACACCGTTAATGTGATGTATTCC
. : . : . : . : . : . :
JMFS153E04+ TCAAAGGACTCCCGGTATTTGTCATATAACTGCTGAGAATAATCATGGGGCGGTTTTTGT
JMFS092A03+ TCAAAGGACTCCCGGTATTTGTCATATAACTGCTGAGAATAATCATGGGGCGGTTTTTGT
JMFF043K17+ TCAAAGGACTCCCGGTATTTGTCATATAACTGCTGAGAATAATCATGGGGCGGTTTTTGT
JMFS093G05+ TCAAAGGACTCCCGGTATTTGTCATATAACTGCTGAGAATAATCATGGGGCGGTTTTTGT
JMFS028B06+ TCAAAGGACTCCCGGTATTTGTCATATAACTGCTGAGAATAATCATGGGGCGGTTTTTGT
JMFS104H03+ TCAAAGGACTCCCGGTATTTGTCATATAACTGCTGAGAATAATCATGGGGCGGTTTTTGT
JMFS049E12+ TCAAAGGACTCCCGGTATTTGTCATATAACTGCTGAGAATAATCATGGGGCGGTTTTTGT
____________________________________________________________
consensus TCAAAGGACTCCCGGTATTTGTCATATAACTGCTGAGAATAATCATGGGGCGGTTTTTGT
. : . : . : . : . : . :
JMFS153E04+ GTGCACATATTGTAAATTGTAGTGTACAACATCATATAATCCTCAGAGCTGAACTGTGGC
JMFS092A03+ GTGCACATATTGTAAATTGTAGTGTACAACATCATATAATCCTCAGAGCTGAACTGTGGC
JMFF043K17+ GTGCACATATTGTAAATTGTAGTGTACAACATCATATAATCCTCAGAGCTGAACTGTGGC
JMFS093G05+ GTGCACATATTGTAAATTGTAGTGTACAACATCATATAATCCTCAGAGCTGAACTGTGGC
JMFS028B06+ GTGCACATATTGTAAATTGTAGTGTACAACATCATATAATCCTCAGAGCTGAACTGTGGC
JMFS104H03+ GTGCACATATTGTAAATTGTAGTGTACAACATCATATAATCCTCAGAGCTGAACTGTGGC
JMFS049E12+ GTGCACATATTGTAAATTGTAGTGTACAACATCATATAATCCTCAGAGCTGAACTGTGGC
____________________________________________________________
consensus GTGCACATATTGTAAATTGTAGTGTACAACATCATATAATCCTCAGAGCTGAACTGTGGC
. : . : . : . : . : . :
JMFS153E04+ TCTGGCAACCCTTCCAGAATGTTCTTCAGCTTTGTTATCCCCCGCTGCATGAAGTCCCAT
JMFS092A03+ TCTGGCAACCCTTCCAGAATGTTCTTCAGCTTTGTTATCCCCCGCTGCATGAAGTCCCAT
JMFF043K17+ TCTGGCAACCCTTCCAGAATGTTCTTCAGCTTTGTTATCCCCCGCTGCATGAAGTCCCAT
JMFS093G05+ TCTGGCAACCCTTCCAGAATGTTCTTCAGCTTTGTTATCCCCCGCTGCATGAAGTCCCAT
JMFS028B06+ TCTGGCAACCCTTCCAGAATGTTCTTCAGCTTTGTTATCCCCCGCTGCATGAAGTCCCAT
JMFS104H03+ TCTGGCAACCCTTCCAGAATGTTCTTCAGCTTTGTTATCCCCCGCTGCATGAAGTCCCAT
JMFS049E12+ TCTGGCAACCCTTCCAGAATGTTCTTCAGCTTTGTTATCCCCCGCTGCATGAAGTCCCAT
____________________________________________________________
consensus TCTGGCAACCCTTCCAGAATGTTCTTCAGCTTTGTTATCCCCCGCTGCATGAAGTCCCAT
. : . : . : . : . : . :
JMFS153E04+ CCCTGTTCTAAATCAATTGTGCTGCGCTGATTCATTGACATTATGATACCTCCAAACTTC
JMFS092A03+ CCCTGTTCTAAATCAATTGTGCTGCGCTGATTCATTGACATTATGATACCTCCAAACTTC
JMFF043K17+ CCCTGTTCTAAATCAATTGTGCTGCGCTGATTCATTGACATTATGATACCTCCAAACTTC
JMFS093G05+ CCCTGTTCTAAATCAATTGTGCTGCGCTGATTCATTGACATTATGATACCTCCAAACTTC
JMFS028B06+ CCCTGTTCTAAATCAATTGTGCTGCGCTGATTCATTGACATTATGATACCTCCAAACTTC
JMFS104H03+ CCCTGTTCTAAATCAATTGTGCTGCGCTGATTCATTGACATTATGATACCTCCAAACTTC
JMFS049E12+ CCCTGTTCTAAATCAATTGTGCTGCGCTGATTCATTGACATTATGATACCTCCAAACTTC
____________________________________________________________
consensus CCCTGTTCTAAATCAATTGTGCTGCGCTGATTCATTGACATTATGATACCTCCAAACTTC
. : . : . : . : . : . :
JMFS153E04+ AAATTTTAGTGCACACAGCTATTCGTCTATTCCAGTTCCAAATTGGAGGAAGAACAGCAC
JMFS092A03+ AAATTTTAGTGCACACAGCTATTCGTCTATTCCAGTTCCAAATTGGAGGAAGAACAGCAC
JMFF043K17+ AAATTTTAGTGCACACAGCTATTCGTCTATTCCAGTTCCAAATTGGAGGAAGAACAGCAC
JMFS093G05+ AAATTTTAGTGCACACAGCTATTCGTCTATTCCAGTTCCAAATTGGAGGAAGAACAGCAC
JMFS028B06+ AAATTTTAGTGCACACAGCTATTCGTCTATTCCAGTTCCAAATTGGAGGAAGAACAGCAC
JMFS104H03+ AAATTTTAGTGCACACAGCTATTCGTCTATTCCAGTTCCAAATTGGAGGAAGAACAGCAC
JMFS049E12+ AAATTTTAGTGCACACAGCTATTCGTCTATTCCAGTTCCAAATTGGAGGAAGAACAGCAC
____________________________________________________________
consensus AAATTTTAGTGCACACAGCTATTCGTCTATTCCAGTTCCAAATTGGAGGAAGAACAGCAC
. : . : . : . : . : . :
JMFS153E04+ CTATCCGAGTAAGTGTTA
JMFS092A03+ CTATCCGAGTAAGTGTTAGTAAAGGTAAAGA
JMFF043K17+ CTATCCGAGTAAGTGTTAGTAAAGGTAAAGAGCTTGCTGGGAAAGCGATCGGAGCTCCGT
JMFS093G05+ C
JMFS028B06+ C
JMFS104H03+ C
JMFS049E12+ CTATCCGAGTAAGTGTTAGTAAAGGTAAAGAGCTTGCTGGGAAAGCGATCGGAGCTCCGT
____________________________________________________________
consensus CTATCCGAGTAAGTGTTAGTAAAGGTAAAGAGCTTGCTGGGAAAGCGATCGGAGCTCCGT