Contig 000408:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS034E04Sequence624000408 (2)emb|CDP07868.1|2e-54unnamed protein product [Coffea canephora]
JMSF046P21Sequence674000408 (2)ref|XP_009615784.1|5e-69PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g14390667022650ref|XP_006357269.1|8e-73PREDICTED: LOW QUALITY PROTEIN: probable LRR receptor-like serine/threonine-prot

Alignment

This contig is upended


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JMSF046P21+ TGTGGAACCTGGGATCTCAGGGAATTGTTGGCTAGGACAAGTTTAACAATGTTGTT
                      ____________________________________________________________
consensus TGTGGAACCTGGGATCTCAGGGAATTGTTGGCTAGGACAAGTTTAACAATGTTGTT
 
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JMSF046P21+ TCCCAAGGAGGGGAAACTTGGTCCTAAGTTGTTGCCACTCAAATCAACCTCTTCGAGCCC
JMFS034E04+ ACCTCTTCGAGCNC
                      ____________________________________________________________
consensus TCCCAAGGAGGGGAAACTTGGTCCTAAGTTGTTGCCACTCAAATCAACCTCTTCGAGCCC
 
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JMSF046P21+ CGATACCCCCTTCAGATCCGGGATACTCCCATTCAACAAGTTATGACTCAAAACCAGGCT
JMFS034E04+ CGATACCCCCTTCAGATCCGGGATACTCCCATTCAACAAGTTATGACTCAAAACCAGGCT
                      ____________________________________________________________
consensus CGATACCCCCTTCAGATCCGGGATACTCCCATTCAACAAGTTATGACTCAAAACCAGGCT
 
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JMSF046P21+ TTTCAGGTTCTTGAACTTGGCTATGGATTGGGGAATGCCGCCACGGATTTGGTTCGAGCT
JMFS034E04+ TTTCAGGTTCTTGAACTTGGCTATGGATTGGGGAATGCCGCCACGGATTTGGTTCGAGCT
                      ____________________________________________________________
consensus TTTCAGGTTCTTGAACTTGGCTATGGATTGGGGAATGCCGCCACGGATTTGGTTCGAGCT
 
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JMSF046P21+ GAGGTTTAACGCCTCGAGCCCGCCAAACCTGGTGATCTTAGCCGGCAAAGAACCCCATAA
JMFS034E04+ GAGGTTTAACGCCTCGAGCCCGCCAAACCTGGTGATCTTAGCCGGCAAAGAACCCCATAA
                      ____________________________________________________________
consensus GAGGTTTAACGCCTCGAGCCCGCCAAACCTGGTGATCTTAGCCGGCAAAGAACCCCATAA
 
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JMSF046P21+ CCCGAGATTCACCAATGACAATCTCTTCAAGCTGGAAAGCTTGGTGAGAAGAGTGAAGAA
JMFS034E04+ CCCGAGATTCACCAATGACAATCTCTTCAAGCTGGAAAGCTTGGTGAGAAGAGTGAAGAA
                      ____________________________________________________________
consensus CCCGAGATTCACCAATGACAATCTCTTCAAGCTGGAAAGCTTGGTGAGAAGAGTGAAGAA
 
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JMSF046P21+ TGAATCAAGAGAGAAATTCTGGGAAAGATGGGAGGCTTTGTTTCCAAGAATTGTAAGTTC
JMFS034E04+ TGAATCAAGAGAGAAATTCTGGGAAAGATGGGAGGCTTTGTTTCCAAGAATTGTAAGTTC
                      ____________________________________________________________
consensus TGAATCAAGAGAGAAATTCTGGGAAAGATGGGAGGCTTTGTTTCCAAGAATTGTAAGTTC
 
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JMSF046P21+ TGTGATGTGATTCCCAGAACAGGTGATCACTAGAGAAGGGGTTTGTGGGAGAAAGCAGAA
JMFS034E04+ TGTGATGTGATTCCCAGAACAGGTGATCACTAGAGAAGGGGTTTGTGGGAGAAAGCAGAA
                      ____________________________________________________________
consensus TGTGATGTGATTCCCAGAACAGGTGATCACTAGAGAAGGGGTTTGTGGGAGAAAGCAGAA
 
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JMSF046P21+ ATTTGTCCAGTTATTCCAGCCTTGAAGAGCTTGGGGGTATTCAAGAAGCTGCTGAACCTG
JMFS034E04+ ATTTGTCCAGTTATTCCAGCCTTGAAGAGCTTGGGGGTATTCAAGAAGCTGCTGAACCTG
                      ____________________________________________________________
consensus ATTTGTCCAGTTATTCCAGCCTTGAAGAGCTTGGGGGTATTCAAGAAGCTGCTGAACCTG
 
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JMSF046P21+ GAATAGGATCCTCTTCTCTGAGGATAACAATTGTGCAGAAGAAACTGGGATTAGCAGAAG
JMFS034E04+ GAATAGGATCCTCTTCTCTGAGGATAACAATTGTGCAGAAGAAACTGGGATTAGCAGAAG
                      ____________________________________________________________
consensus GAATAGGATCCTCTTCTCTGAGGATAACAATTGTGCAGAAGAAACTGGGATTAGCAGAAG
 
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JMSF046P21+ CAGGAACAGGGAACAAACCAAGAAACTGGGCTTCATCTTTTTTCTTGTTTTTGTGAGGAA
JMFS034E04+ CAGGAACAGGGAACAAACCAAGAAACTGGGCTTCATCTTTTTTCTTGTTTTTGTGAGGAA
                      ____________________________________________________________
consensus CAGGAACAGGGAACAAACCAAGAAACTGGGCTTCATCTTTTTTCTTGTTTTTGTGAGGAA
 
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JMSF046P21+ TTGAATCTCAAGTTCCC
JMFS034E04+ TTGAATCTCAAGTTCCCATCAATCTACTAGGCTAGAAAGAAAAATATGGAGCTTTTTCAC
                      ____________________________________________________________
consensus TTGAATCTCAAGTTCCCATCAATCTACTAGGCTAGAAAGAAAAATATGGAGCTTTTTCAC