Contig 000402:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS004G05Sequence510000402 (7)ref|XP_011078363.1|3e-89PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD14 [Se
JMFS020A08Sequence625000402 (7)ref|XP_011078363.1|2e-92PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD14 [Se
JMFS020F02Sequence627000402 (7)ref|XP_011078363.1|3e-83PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD14 [Se
JMFS031B04Sequence591000402 (7)ref|XP_011078363.1|6e-72PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD14 [Se
JMFS067E07Sequence624000402 (7)ref|XP_011078363.1|7e-89PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD14 [Se
JMSF016C21Sequence226000402 (7)ref|XP_011078363.1|1e-31PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD14 [Se736008489 (2)ref|XP_009627508.1|5e-36PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD14 iso
JMSF016L05Sequence545000402 (7)ref|XP_011078363.1|2e-78PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD14 [Se776008489 (2)ref|XP_009627509.1|2e-34PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD14 iso

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF016L05+ GGGAACCCCCTCTCACCCG
                      ____________________________________________________________
consensus GGGAACCCCCTCTCACCCG
 
. : . : . : . : . : . :
JMFS067E07+ TATCTTCTATCCACATAAACATGCTTAATAAAATCACGAAGCCTCTCTACATTACTTC
JMFS004G05+ TATCTTCTATCCACATAAACATGCTTAATAAAATCACGAAGCCTCTCTACATTACTTC
JMFS020F02+ TATCTTCTATCCACATAAACATGCTTAATAAAATCACGAAGCCTCTCTACATTACTTC
JMFS020A08+ TATCTTCTATCCACATAAACATGCTTAATAAAATTACGAAGCCTCTCTACATTACTGC
JMSF016L05+ TGTATCTTCTATCCACATAAACATGCTTAATAAAATCACGAAGCCTCTCTACATTACTTC
JMFS031B04+ TATCCACATAAACATGCTTAATAAAATCACGAAGCCTCTCTACATTACTTC
                      ____________________________________________________________
consensus TGTATCTTCTATCCACATAAACATGCTTAATAAAATCACGAAGCCTCTCTACATTACTTC
 
. : . : . : . : . : . :
JMFS067E07+ CATCAGGGAGAGAATTGCGTTGTGGATCCAACTCCTTCAAATAAATTTCCTTTGCACTCG
JMFS004G05+ CATCAGGGAGAGAATTGCGTTGTGGATCCAACTCCTTCAAATAAATTTCCTTTGCACTCG
JMFS020F02+ CATCAGGGAGAGAATTGCGTTGTGGATCCAACTCCTTCAAATAAATTTCCTTTGCACTCG
JMFS020A08+ CATCAGGGAAAGAATTATTCTGTGGATCCCATTCTTTTAGATAAATTTCCTTTGCACTCG
JMSF016L05+ CATCAGGGAGAGAATTGCGTTGTGGATCCAACTCCTTCAAATAAATTTCCTTTGCACTCG
JMFS031B04+ CATCAGGGAGAGAATTGCGTTGTGGATCCAACTCCTTCAAATAAATTTCCTTTGCACTCG
                      ____________________________________________________________
consensus CATCAGGGAGAGAATTGCGTTGTGGATCCAACTCCTTCAAATAAATTTCCTTTGCACTCG
 
. : . : . : . : . : . :
JMFS067E07+ CATTTCCACCTCCTTGTAGTGCACTAACTTCTTGTGAAGTAAACTTAGCCATGGATACTG
JMFS004G05+ CATTTCCACCTCCTTGTAGTGCACTAACTTCTTGTGAAGTAAACTTAGCCATGGATACTG
JMFS020F02+ CATTTCCACCTCCTTGTAGTGCACTAACTTCTTGTGAAGTAAACTTAGCCATGGATACTG
JMFS020A08+ CATTTCCACCTCCTTGTAAAGCACTAACTTCTTGTGAAGTAAACTTAGCCATGGATATTG
JMSF016L05+ CATTTCCACCTCCTTGTAGTGCACTAACTTCTTGTGAAGTAAACTTAGCCATGGATACTG
JMFS031B04+ CATTTCCACCTCCTTGTAGTGCACTAACTTCTTGTGAAGTAAACTTAGCCATGGATACTG
                      ____________________________________________________________
consensus CATTTCCACCTCCTTGTAGTGCACTAACTTCTTGTGAAGTAAACTTAGCCATGGATACTG
 
. : . : . : . : . : . :
JMFS067E07+ ACTTTACTCTGTGTGTAAACTCCCGATGTATGCCACTGCAGGTTGTGCAAATAAACGTTG
JMFS004G05+ ACTTTACTCTGTGTGTAAACTCCCGATGTATGCCACTGCAGGTTGTGCAAATAAACGTTG
JMFS020F02+ ACTTTACTCTGTGTGTAAACTCCCGATGTATGCCACTGCAGGTTGTGCAAATAAACGTTG
JMFS020A08+ ACTTCACTCTGTGTGTAAACTCCCGATGTATCCCACTGCAGGTTGTGCAAACAAATGTCC
JMSF016L05+ ACTTTACTCTGTGTGTAAACTCCCGATGTATGCCACTGCAGGTTGTGCAAATAAACGTTG
JMSF016C21+ TGTAAACTCCCGATGTATGCCACTGCAGGTTGTGCAAATAAACGTTG
JMFS031B04+ ACTTTACTCTGTGTGTAAACTCCCGATGTATGCCACTGCAGGTTGTGCAAATAAACGTTG
                      ____________________________________________________________
consensus ACTTTACTCTGTGTGTAAACTCCCGATGTATGCCACTGCAGGTTGTGCAAATAAACGTTG
 
. : . : . : . : . : . :
JMFS067E07+ AGAAGTTAATGCAGACATATTGAGGACCCAAGCTATTACAGTTTATACACCTCCGGTTGT
JMFS004G05+ AGAAGTTAATGCAGACATATTGAGGACCCAAGCTATTACAGTTTATACACCTCCGGTTGT
JMFS020F02+ AGAAGTTAATGCAGACATATTGAGGACCCAAGCTATTACAGTTTATACACCTCCGGTTGT
JMFS020A08+ AAAAATTAATGCACACATATTGAGGCCCCAAGCTATTACAGTTGATGCACCTCCGGTTCT
JMSF016L05+ AGAAGTTAATGCAGACATATTGAGGACCCAAGCTATTACAGTTTATACACCTCCGGTTGT
JMSF016C21+ AGAAGTTAATGCAGACATATTGAGGACCCAAGCTATTACAGTTTATACACCTCCGGTTGT
JMFS031B04+ AGAAGTTAATGCAGACATATTGAGGACCCAAGCTATTACAGTTTATACACCTCCGGTTGT
                      ____________________________________________________________
consensus AGAAGTTAATGCAGACATATTGAGGACCCAAGCTATTACAGTTTATACACCTCCGGTTGT
 
. : . : . : . : . : . :
JMFS067E07+ CAGGCAGCTTAAGTAGGCCCCGTATAATTCTCTCATTCTTCTCGTCCTCTTTGAACCGAT
JMFS004G05+ CAGGCAGCTTAAGTAGGCCCCGTATAATTCTCTCATTCTTCTCGTCCTCTTTGAACCGAT
JMFS020F02+ CAGGCAGCTTAAGTAGGCCCCGTATAATTCTCTCATTCTTCTCGTCCTCTTTGAACCGAT
JMFS020A08+ CGGGCAGCTTAAG
JMSF016L05+ CAGGCAGCTTAAGTAGGCCCCGTATAATTCTCTCATTCTTCTCGTCCTCTTTGAACCGAT
JMSF016C21+ CAGGCAGCTTAAGTAGGCCCCGTATAATTCTCTCATTCTTCTCGTCCTCTTTGAACCGAT
JMFS031B04+ CAGGCAGCTTAAGTAGGCCCCGTATAATTCTCTCATTCTTCTCGTCCTCTTTGAACCGAT
                      ____________________________________________________________
consensus CAGGCAGCTTAAGTAGGCCCCGTATAATTCTCTCATTCTTCTCGTCCTCTTTGAACCGAT
 
. : . : . : . : . : . :
JMFS067E07+ TCGCCATTTGGACACCAATCAAAGTCCTATTCTTCTCAATCCTCTGAGGGATAGACAGGG
JMFS004G05+ TCGCCATTTGGACACCAATCAAAGTCCTATTCTTCTCAATCCTC
JMFS020F02+ TCGCCATTTGGACACCAATCAAAGTCCTATTCTTCTCAATCCTCTGAGGGATAGACAGGG
JMSF016L05+ TCGCCATTTGGACACCAATCAAAGTCCTATTCTTCTCAATCCTCTGAGGGATAGACAGGG
JMSF016C21+ TCGCCATTTGGACACCAATCAAAGTCCTATTCTTCTCAATCCTCTGAGGGATAGACAG
JMFS031B04+ TCGCCATTTGGACACCAATCAAAGTCCTATTCTTCTCAATCCTCTGAGGGATAGACAGGG
                      ____________________________________________________________
consensus TCGCCATTTGGACACCAATCAAAGTCCTATTCTTCTCAATCCTCTGAGGGATAGACAGGG
 
. : . : . : . : . : . :
JMFS067E07+ TGGAACTGGGAGGAATTGGTAGGGGTTTTACAGATCTTCAGTTTTTGGAAACAACGGATT
JMFS020F02+ TGGAACTGGGAGGAATTGGTAGGGGTTTTACAGATCTTCAGTTTTTGGAAACAACGGATT
JMSF016L05+ TGGAACTGGGAGGAATTGGTAGGGGTTTTACAGATCTTCAGTTTTTGGAAACAACGGATT
JMFS031B04+ TGGAACTGGGAGGAATTGGTAGGGGTTTTACAGATCTTCAGTTTTTGGAAACAACGGATT
                      ____________________________________________________________
consensus TGGAACTGGGAGGAATTGGTAGGGGTTTTACAGATCTTCAGTTTTTGGAAACAACGGATT
 
. : . : . : . : . : . :
JMFS067E07+ ACAGCTCAGAGTGCTTTTCTGAAAACACGAAGAGAGAGAAA
JMFS020F02+ ACAGCTCAGAGTGCTTTTCTGAAAACAC
JMSF016L05+ ACAGCTCAGAGTGCTTTTCTGAAAACACGAAGAGAGAGAAA
JMFS031B04+ ACAGCTCAGAGTGCTTTTCTGAAAACACGAAGAGAGAGAAAGAGTGGGTGAAATTATAGG
                      ____________________________________________________________
consensus ACAGCTCAGAGTGCTTTTCTGAAAACACGAAGAGAGAGAAAGAGTGGGTGAAATTATAGG
 
. : . : . : . : . : . :
JMFS031B04+ ATGCTGTGCGTACTCATAGGAGAAAAGTATGGATTCTATGTCTAGCATAGGATGGTTGAA
                      ____________________________________________________________
consensus ATGCTGTGCGTACTCATAGGAGAAAAGTATGGATTCTATGTCTAGCATAGGATGGTTGAA