Contig 000389:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012P06Sequence515000389 (4)ref|XP_011095467.1|2e-52PREDICTED: 65-kDa microtubule-associated protein 1 [Sesamum indicum]482021244ref|XP_011097829.1|6e-39PREDICTED: 65-kDa microtubule-associated protein 1 [Sesamum indicum] ref|XP_0110
JMFS017G11Sequence611000389 (4)ref|XP_011095467.1|4e-78PREDICTED: 65-kDa microtubule-associated protein 1 [Sesamum indicum]
JMFS100B04Sequence599000389 (4)ref|XP_011095467.1|1e-77PREDICTED: 65-kDa microtubule-associated protein 1 [Sesamum indicum]
JMFS131F11Sequence619000389 (4)ref|XP_011095467.1|3e-70PREDICTED: 65-kDa microtubule-associated protein 1 [Sesamum indicum]

Alignment

This contig is upended


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JMFS100B04+                                                                  AAACT
JMFS017G11+                                                            GCTCACAAACT
                      ____________________________________________________________
consensus                                                              GCTCACAAACT
 
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JMFS131F11+                                      TTTCTTTNTGAAGTTCTTGAAGCTGAACACCAA
JMFS100B04+           CAAGAACCTTGCGCAATCTCTCACTCTTTTCTTTTTGAAGTTCTTGAAGCTGAACACCAA
JMFS017G11+           CAAGAACCTTGCGCAATCTCTCACTCTTTTCTTTTTGAAGTTCTTGAAGCTGAACACCAA
                      ____________________________________________________________
consensus             CAAGAACCTTGCGCAATCTCTCACTCTTTTCTTTTTGAAGTTCTTGAAGCTGAACACCAA
 
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JMFS131F11+           ATTCATCTAACTTTTTCTGGGATAAATCAGACTCATCTACTTTCACACTCTCCGGCTGGT
JMFS100B04+           ATTCATCTAACTTTTTCTGGGATAAATCAGACTCATCTACTTTCACACTCTCCGGCTGGT
JMFS017G11+           ATTCATCTAACTTTNTCTGGGATAAATCAGACTCATCTACTTTCACACTCTCCGGCTGGT
                      ____________________________________________________________
consensus             ATTCATCTAACTTTTTCTGGGATAAATCAGACTCATCTACTTTCACACTCTCCGGCTGGT
 
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JMFS131F11+           CACTAGTCCCCGATATCTCATTCCTTATCTTTTGAATTTGTGATTGTACATCAAAGAACT
JMFS100B04+           CACTAGTCCCCGATATCTCATTCCTTATCTTTTGAATTTGTGATTGTACATCAAAGAACT
JMFF012P06+                                         TTTGAATTTGTGATTGTACATCAAAGAACT
JMFS017G11+           CACTAGTCCCCGATATCTCATTCCTTATCTTTTGAATTTGTGATTGTACATCAAAGAACT
                      ____________________________________________________________
consensus             CACTAGTCCCCGATATCTCATTCCTTATCTTTTGAATTTGTGATTGTACATCAAAGAACT
 
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JMFS131F11+           CCTTTACCCTCTCCCCTTTCTGTTTCCACAGTTTCTCAAGTGCAGGTTCTATAGCTGCAA
JMFS100B04+           CCTTTACCCTCTCCCCTTTCTGTTTCCACAGTTTCTCAAGTGCAGGTTCTATAGCTGCAA
JMFF012P06+           CCTTTACCCTCTCCCCTTTCTGTTTCCACAGTTTCTCAAGTGCAGGTTCTATAGCTGCAA
JMFS017G11+           CCTTTACCCTCTCCCCTTTCTGTTTCCACAGTTTCTCAAGTGCAGGTTCTATAGCTGCAA
                      ____________________________________________________________
consensus             CCTTTACCCTCTCCCCTTTCTGTTTCCACAGTTTCTCAAGTGCAGGTTCTATAGCTGCAA
 
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JMFS131F11+           GCTGTTCCTTGATTGTTCTTGAAGTTTTATCTGGGATAATCCCATTATTGCATGTCATCT
JMFS100B04+           GCTGTTCCTTGATTGTTCTTGAAGTTTTATCTGGGATAATCCCATTATTGCATGTCATCT
JMFF012P06+           GCTGTTCCTTGATTGTTCTTGAAGTTTTATCTGGGATAATCCCATTATTGCATGTCATCT
JMFS017G11+           GCTGTTCCTTGATTGTTCTTGAAGTTTTATCTGGGATAATCCCATTATTGCATGTCATCT
                      ____________________________________________________________
consensus             GCTGTTCCTTGATTGTTCTTGAAGTTTTATCTGGGATAATCCCATTATTGCATGTCATCT
 
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JMFS131F11+           CTCCAAGTGATGCTTGAAGACTGGAGAGTTCATCTTTGGCATCTGCAAGTTCCTGAAGAA
JMFS100B04+           CTCCAAGTGATGCTTGAAGACTGGAGAGTTCATCTTTGGCATCTGCAAGTTCCTGAAGAA
JMFF012P06+           CTCCAAGTGATGCTTGAAGACTGGAGAGTTCATCTTTGGCATCTGCAAGTTCCTGAAGAA
JMFS017G11+           CTCCAAGTGATGCTTGAAGACTGGAGAGTTCATCTTTGGCATCTGCAAGTTCCTGAAGAA
                      ____________________________________________________________
consensus             CTCCAAGTGATGCTTGAAGACTGGAGAGTTCATCTTTGGCATCTGCAAGTTCCTGAAGAA
 
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JMFS131F11+           GTTTAGCCCTACACTTCACTGCACAGCTGATCTTTCTCTTGTATACATCAAAACACTCTT
JMFS100B04+           GTTTAGCCCTACACTTCACTGCACAGCTGATCTTTCTCTTGTATACATCAAAACACTCTT
JMFF012P06+           GTTTAGCCCTACACTTCACTGCACAGCTGATCTTTCTCTTGTATACATCAAAACACTCTT
JMFS017G11+           GTTTAGCCCTACACTTCACTGCACAGCTGATCTTTCTCTTGTATACATCAAAACACTCTT
                      ____________________________________________________________
consensus             GTTTAGCCCTACACTTCACTGCACAGCTGATCTTTCTCTTGTATACATCAAAACACTCTT
 
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JMFS131F11+           GTTCCAACTCAAGAAGCATCTTATCCCTCTCTTCATCACTTTCACCAACCTCATCCCATA
JMFS100B04+           GTTCCAACTCAAGAAGCATCTTATCCCTCTCTTCATCACTTTCACCAACCTCATCCCATA
JMFF012P06+           GTTCCAACTCAAGAAGCATCTTATCCCTCTCTTCATCACTTTCACCAACCTCATCCCATA
JMFS017G11+           GTTCCAACTCAAGAAGCATCTTATCCCTCTCTTCATCACTTTCACCAACCTCATCCCATA
                      ____________________________________________________________
consensus             GTTCCAACTCAAGAAGCATCTTATCCCTCTCTTCATCACTTTCACCAACCTCATCCCATA
 
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JMFS131F11+           ATTTCTGCAGCTGCTGCAATAAAGTACCACA                             
JMFS100B04+           ATTTCTGCAGCTGCTGCAATAAAGTACCACAAGTAGGCTGGGGATCTTCAGCATCCACTG
JMFF012P06+           ATTTCTGCAGCTGCTGCAATAAAGTACCACA                             
JMFS017G11+           ATTTCTGCAGCTGCTGCAATAAAGTACCACAAGTAGGCTGGGGATCTTCAGCATCCACTG
                      ____________________________________________________________
consensus             ATTTCTGCAGCTGCTGCAATAAAGTACCACAAGTAGGCTGGGGATCTTCAGCATCCACTG
 
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JMFS100B04+           CTTCCATTGC                                                  
JMFS017G11+           CTTCCATTGCCTGCTAAGTACACATAAAAAGCTCAGATTTTGTGTATAATCTGACTTTAA
                      ____________________________________________________________
consensus             CTTCCATTGCCTGCTAAGTACACATAAAAAGCTCAGATTTTGTGTATAATCTGACTTTAA