Contig 000385:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS016C06Sequence557000385 (2)ref|XP_009786287.1|1e-46PREDICTED: receptor-like protein kinase HSL1 [Nicotiana sylvestris]
JMFS128G07Sequence618000385 (2)ref|XP_010271555.1|2e-54PREDICTED: receptor-like protein kinase HSL1 [Nelumbo nucifera]

Alignment

This contig is upended


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JMFS128G07+                                                     TGAGCTTTGTAAGCCCAG
                      ____________________________________________________________
consensus                                                       TGAGCTTTGTAAGCCCAG
 
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JMFS128G07+           AAATGGCGTCCGGTAGTTGCCACTGGTTAAAGCCGCAGTTTTCGTTGAAGTTGAGGACCC
JMFS016C06+                                                      GTTGAAGTTGAGGACCC
                      ____________________________________________________________
consensus             AAATGGCGTCCGGTAGTTGCCACTGGTTAAAGCCGCAGTTTTCGTTGAAGTTGAGGACCC
 
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JMFS128G07+           GGAGCTCGGTGAGATTGGCCACCGACGTCGGAAACTCGCCGGTGAAGAGATTGTAGGAGA
JMFS016C06+           GGAGCTCGGTGAGATTGGCCACCGACGTCGGAAACTCGCCGGTGAAGAGATTGTAGGAGA
                      ____________________________________________________________
consensus             GGAGCTCGGTGAGATTGGCCACCGACGTCGGAAACTCGCCGGTGAAGAGATTGTAGGAGA
 
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JMFS128G07+           GATCAAGCAACCTCAGAGCCCGCAACGGCGTCAAATCCGGCAATGTTCCCGCCAGATACG
JMFS016C06+           GATCAAGCAACCTCAGAGCCCGCAACGGCGTCAAATCCGGCAATGTTCCCGCCAGATACG
                      ____________________________________________________________
consensus             GATCAAGCAACCTCAGAGCCCGCAACGGCGTCAAATCCGGCAATGTTCCCGCCAGATACG
 
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JMFS128G07+           TAGCCGACATGTTCAGCTCTTCCAAGAAAGAGCAGTTGGTGATTCTGGCCGGAAAGTAAC
JMFS016C06+           TAGCCGACATGTTCAGCTCTTCCAAGAAAGAGCAGTTGGTGATTCTGGCCGGAAAGTAAC
                      ____________________________________________________________
consensus             TAGCCGACATGTTCAGCTCTTCCAAGAAAGAGCAGTTGGTGATTCTGGCCGGAAAGTAAC
 
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JMFS128G07+           TCCCATGGAAGTGATTCTGGCCGAGTTTAAGAATCCTCAGCTCCGGCAAATAACTACAAA
JMFS016C06+           TCCCATGGAAGTGATTCTGGCCGAGTTTAAGAATCCTCAGCTCCGGCAAATAACTACAAA
                      ____________________________________________________________
consensus             TCCCATGGAAGTGATTCTGGCCGAGTTTAAGAATCCTCAGCTCCGGCAAATAACTACAAA
 
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JMFS128G07+           CATCCCCCGGAAACCGGCCGGATAATCCCCACCGGCTGATATCAATCTTCACAACATAAC
JMFS016C06+           CATCCCCCGGAAACCGGCCGGATAATCCCCACCGGCTGATATCAATCTTCACAACATAAC
                      ____________________________________________________________
consensus             CATCCCCCGGAAACCGGCCGGATAATCCCCACCGGCTGATATCAATCTTCACAACATAAC
 
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JMFS128G07+           CTCGATTATCACACCCAATCCCGGAATAATTGCAGAACGGTTTCCCATCCCAACCAGCCA
JMFS016C06+           CTCGATTATCACACCCAATCCCGGAATAATTGCAGAACGGTTTCCCATCCCAACCAGCCA
                      ____________________________________________________________
consensus             CTCGATTATCACACCCAATCCCGGAATAATTGCAGAACGGTTTCCCATCCCAACCAGCCA
 
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JMFS128G07+           AGAAATCCCCTGTCAGAGACTTCTTCACAACATCAAAGAACTCACCCTGCTTCTCCACAC
JMFS016C06+           AGAAATCCCCTGTCAGAGACTTCTTCACAACATCAAAGAACTCACCCTGCTTCTCCACAC
                      ____________________________________________________________
consensus             AGAAATCCCCTGTCAGAGACTTCTTCACAACATCAAAGAACTCACCCTGCTTCTCCACAC
 
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JMFS128G07+           TCCCCTCATACCCATCCGCCACTGCTAAAAACAGCAAAAGGAAGAAGATGACAGCTCGCT
JMFS016C06+           TCCCCTCATACCCATCCGCCACTGCTAAAAACAGCAAAAGGAAGAAGATGACAGCTCGCT
                      ____________________________________________________________
consensus             TCCCCTCATACCCATCCGCCACTGCTAAAAACAGCAAAAGGAAGAAGATGACAGCTCGCT
 
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JMFS128G07+           GAGCAGCCATTAAAGATCTGATCTTTAACCCCACAGTAGAGAGATGAAGGGGGAATATAA
JMFS016C06+           GAGCAGCCATTAAAGATCTGATCTTTAACCCCACAGTAGAGAGATGAAGGGGGAATATAA
                      ____________________________________________________________
consensus             GAGCAGCCATTAAAGATCTGATCTTTAACCCCACAGTAGAGAGATGAAGGGGGAATATAA