Contig 000384:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFN039N16-                        AGCAATCCAGAGTTGATTCATCTCCAGTTTCCCCTGCTACTCCTACG
                      ____________________________________________________________
consensus                          AGCAATCCAGAGTTGATTCATCTCCAGTTTCCCCTGCTACTCCTACG
 
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JMFN039N16-           CGAAGAGGAGATGATTCGAACAATGCTGCTGCAGCTGCTGCTCGTGCATGGATGTCGATA
rJMSF039D05+                  AGATGATTCGAACAATGCTGCTGCAGCTGCTGCTCGTGCATGGATGTCGATA
                      ____________________________________________________________
consensus             CGAAGAGGAGATGATTCGAACAATGCTGCTGCAGCTGCTGCTCGTGCATGGATGTCGATA
 
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JMFN039N16-           GGGGCAGGAGGTTTTAAACAGGCTAGTGACAACACAGGCACCAACAACAGTCAAATATCT
rJMSF039D05+          GGGGCAGGAGGTTTTAAACAGGCTAGTGACAACACAGGCACCAACAACAGTCAAATATCT
                      ____________________________________________________________
consensus             GGGGCAGGAGGTTTTAAACAGGCTAGTGACAACACAGGCACCAACAACAGTCAAATATCT
 
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JMFN039N16-           GCTGAATCCTTATATAATCCCTCCCGTGATCACCAACCACAGAATTTACAATATCGCGGA
rJMSF039D05+          GCTGAATCCTTATATAATCCCTCCCGTGATCACCAACCACAGAATTTACAATATCGCGGA
                      ____________________________________________________________
consensus             GCTGAATCCTTATATAATCCCTCCCGTGATCACCAACCACAGAATTTACAATATCGCGGA
 
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JMFN039N16-           GAATTTCCTGCATCTGGGATGCATTTCCAGCCTGGTAAGGGCAGTTTTCCCTTCAACGCC
rJMSF039D05+          GAATTTCCTGCATCTGGGATGCATTTCCAGCCTGGTAAGGGCAGTTTTCCCTTCAACGCC
                      ____________________________________________________________
consensus             GAATTTCCTGCATCTGGGATGCATTTCCAGCCTGGTAAGGGCAGTTTTCCCTTCAACGCC
 
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JMFN039N16-           TTTGTGCCCCCCCATATGTCTAGAGCAGGAATCGAAGCTCAGATACCAAACCGACCAATG
rJMSF039D05+          TTTGTGCCCCCCCATATGTCTAGAGCAGGAATCGAAGCTCAGATACCAAACCGACCAATG
rJMFF004A24+              TGCCCCCCCATATGTCTAGAGCAGGAATCGAAGCTCAGATACCAAACCGACCAATG
                      ____________________________________________________________
consensus             TTTGTGCCCCCCCATATGTCTAGAGCAGGAATCGAAGCTCAGATACCAAACCGACCAATG
 
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JMFN039N16-           GTTTTCCCACAATTAGTAGCTGCCGACTTGTCTAGATTCCAGGTGCCTTCTCCTCGGCAG
rJMSF039D05+          GTTTTCCCACAATTAGTAGCTGCCGACTTGTCTAGATTCCAGGTGCCTTCTCCTCGGCAG
rJMFF004A24+          GTTTTCCCACAATTAGTAGCTGCCGACTTGTCTAGATTCCAGGTGCCTTCTCCTCGGCAG
                      ____________________________________________________________
consensus             GTTTTCCCACAATTAGTAGCTGCCGACTTGTCTAGATTCCAGGTGCCTTCTCCTCGGCAG
 
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JMFN039N16-           AATCTCAATACACCTGCTCAGCCAAGACCAAAACAGGAATCACTTCCTCCTGACTTGAAC
rJMSF039D05+          AATCTCAATACACCTGCTCAGCCAAGACCAAAACAGGAATCACTTCCTCCTGACTTGAAC
rJMFF004A24+          AATCTCAATACACCTGCTCAGCCAAGACCAAAACAGGAATCACTTCCTCCTGACTTGAAC
                      ____________________________________________________________
consensus             AATCTCAATACACCTGCTCAGCCAAGACCAAAACAGGAATCACTTCCTCCTGACTTGAAC
 
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JMFN039N16-           ATTAGTTTTCAGTCTTCTGGGTCTCCCGGCAGACCATCTTCGGGTGTTTTGGTCGATTCT
rJMSF039D05+          ATTAGTTTTCAGTCTTCTGGGTCTCCCGGCAGACCATCTTCGGGTGTTTTGGTCGATTCT
rJMFF004A24+          ATTAGTTTTCAGTCTTCTGGGTCTCCCGGCAGACCATCTTCGGGTGTTTTGGTCGATTCT
                      ____________________________________________________________
consensus             ATTAGTTTTCAGTCTTCTGGGTCTCCCGGCAGACCATCTTCGGGTGTTTTGGTCGATTCT
 
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JMFN039N16-           CAGCAGCCAGACCTTGCCTTGCAACTGTGAGTTTTGAAGATGGGATTACTGTGATGATGC
rJMSF039D05+          CAGCAGCCAGACCTTGCCTTGCAACTGTGAGTTTTGAAGATGGGATTACTGTGATGATGC
rJMFF004A24+          CAGCAGCCAGACCTTGCCTTGCAACTGTGAGTTTTGAAGATGGGATTACTGTGATGATGC
                      ____________________________________________________________
consensus             CAGCAGCCAGACCTTGCCTTGCAACTGTGAGTTTTGAAGATGGGATTACTGTGATGATGC
 
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JMFN039N16-           CAATTCTACAGTTTGGCCATTTGAAGTGATCTGAAGCTCCATCTTT              
rJMSF039D05+          CAATTCTACAGTTTGGCCATTTGAAGTGATCTGAAGCTCCATC-TTTCCATGAATCAACA
rJMFF004A24+          CAATTCTACAGTTTGGCCATTTGAAGTGATCTGAAGCTCCATCTTTTCCATGAATCAACA
                      ____________________________________________________________
consensus             CAATTCTACAGTTTGGCCATTTGAAGTGATCTGAAGCTCCATCTTTTCCATGAATCAACA
 
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rJMSF039D05+          GCAGTTTGTACTTAATCCATGCCGGGCATTCCATTTCTCCTGTTTGCTGTTCTTTCACGA
rJMFF004A24+          GCAGTTTGTACTTAATCCATGCCGGGCATTCCATTTCTCCTGTTTGCTGTTCTTTCACGA
                      ____________________________________________________________
consensus             GCAGTTTGTACTTAATCCATGCCGGGCATTCCATTTCTCCTGTTTGCTGTTCTTTCACGA
 
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rJMSF039D05+          CACACCATATTGTGTAAAGGTATGCCCAAGCTTATCGGAAAAAAACATTTCGGTATTAGT
rJMFF004A24+          CACACCATATTGTGTAAAGGTATGCCCAAGCTTATCGGAAAAAAACATTTCGGTATTAGT
                      ____________________________________________________________
consensus             CACACCATATTGTGTAAAGGTATGCCCAAGCTTATCGGAAAAAAACATTTCGGTATTAGT
 
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rJMSF039D05+          CAACAGGCCACCTCTTCTAAAAAGGATTGCACCCCAATCACAAGATAACGCTGCCCTTCT
rJMFF004A24+          CAACAGGCCACCTCTTCTAAAAAGGATTGCACCCCAATCACAAGATAACGCTGCCCTTCT
                      ____________________________________________________________
consensus             CAACAGGCCACCTCTTCTAAAAAGGATTGCACCCCAATCACAAGATAACGCTGCCCTTCT
 
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rJMSF039D05+          CGAAATCTAGTAGGATAACCAAGTTTCAGGGAGAAATGTTGTAATAATATTGTAGCTGTG
rJMFF004A24+          CGAAATCTAGTAGGATAACCAAGTTTCAGGGAGAAATGTTGTAATAATATTGTAGCTGTG
                      ____________________________________________________________
consensus             CGAAATCTAGTAGGATAACCAAGTTTCAGGGAGAAATGTTGTAATAATATTGTAGCTGTG
 
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rJMSF039D05+          TAGGACTGTAGGTCATTATCTGGTCACCCACAAA                          
rJMFF004A24+          TAGGACTGTAGGTCATTATCTGGTCACCCACAAATGGAATTAGCATTCTTGTACATTGAT
JMFS010B10+                                            ATGGAATTAGCATTCTTGTACATTGAT
                      ____________________________________________________________
consensus             TAGGACTGTAGGTCATTATCTGGTCACCCACAAATGGAATTAGCATTCTTGTACATTGAT
 
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rJMFF004A24+          CAAAGGAAGATTGCTTTCAGATTCGCTTTTTTCATGCCCCATGCAATCACAT        
JMFS010B10+           CAAAGGAAGATTGCTTTCAGATTCGCTTTTTTCATGCCCCATGCAATCACATTTCCTTTC
                      ____________________________________________________________
consensus             CAAAGGAAGATTGCTTTCAGATTCGCTTTTTTCATGCCCCATGCAATCACATTTCCTTTC
 
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JMFS010B10+           TCGTACTTGTGTATTCTCACCATTTGATTTTTTCCCCCAAAATTGAAAGGAAATTATATT
                      ____________________________________________________________
consensus             TCGTACTTGTGTATTCTCACCATTTGATTTTTTCCCCCAAAATTGAAAGGAAATTATATT
 
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JMFS010B10+           ACAGATCTACGAATCCTGACATAGGTTGCAACCCGAGAGTAATAAATATACATCTTTTTC
                      ____________________________________________________________
consensus             ACAGATCTACGAATCCTGACATAGGTTGCAACCCGAGAGTAATAAATATACATCTTTTTC
 
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JMFS010B10+           ATCAAATTTGTGACCTGTTAATCTGTTATTGATCACAAGTTTATGACACTTAATCATGAG
                      ____________________________________________________________
consensus             ATCAAATTTGTGACCTGTTAATCTGTTATTGATCACAAGTTTATGACACTTAATCATGAG
 
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JMFS010B10+           ACTTTTGGCCCTATGCTAATTCTGAAACCGACTGCATATAATGCACCGGGAGCCTAATAT
                      ____________________________________________________________
consensus             ACTTTTGGCCCTATGCTAATTCTGAAACCGACTGCATATAATGCACCGGGAGCCTAATAT
 
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JMFS010B10+           CTACACATCTTTTAACTATACGCAAATAAACCTAATTACCTTGAATTTCTCAATTTTTGC
                      ____________________________________________________________
consensus             CTACACATCTTTTAACTATACGCAAATAAACCTAATTACCTTGAATTTCTCAATTTTTGC
 
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JMFS010B10+           CTCTGTTTTTGAGTCTCCTCGCCATTGGAATTGCCAGACAAAATGAAATTGGAAGCTTTC
                      ____________________________________________________________
consensus             CTCTGTTTTTGAGTCTCCTCGCCATTGGAATTGCCAGACAAAATGAAATTGGAAGCTTTC
 
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JMFS010B10+           GCTTTGGCCTTTGCTTCTCCGTGATTGAATTACGGCGAAACCTTTGCTTCTCCGTGATTG
                      ____________________________________________________________
consensus             GCTTTGGCCTTTGCTTCTCCGTGATTGAATTACGGCGAAACCTTTGCTTCTCCGTGATTG
 
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JMFS010B10+           AATTACGGCGAACACAAGCGTCGCCGTCGCAGATAATTCGGTTTGATCTAGCCGGTCCCG
                      ____________________________________________________________
consensus             AATTACGGCGAACACAAGCGTCGCCGTCGCAGATAATTCGGTTTGATCTAGCCGGTCCCG
 
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JMFS010B10+           GTCTGGAACGGGTCCAGAAATCGAAGCAGGCCATGGAGAAGGGAAGATACTTTCGTCTTG
                      ____________________________________________________________
consensus             GTCTGGAACGGGTCCAGAAATCGAAGCAGGCCATGGAGAAGGGAAGATACTTTCGTCTTG