Contig 000379:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS006F09Sequence590000379 (5)
JMFS070C12Sequence511000379 (5)
JMFS150F06Sequence604000379 (5)ref|XP_006341660.1|67.4PREDICTED: uncharacterized protein LOC102583258 [Solanum tuberosum]
JMSF025I20Sequence661000379 (5)ref|XP_006341660.1|65.5PREDICTED: uncharacterized protein LOC102583258 [Solanum tuberosum]747007122 (2)ref|XP_009782273.1|315PREDICTED: uncharacterized protein LOC104231045 [Nicotiana sylvestris]
JMSF051M13Sequence704000379 (5)ref|XP_006341660.1|87.0PREDICTED: uncharacterized protein LOC102583258 [Solanum tuberosum]741007122 (2)ref|XP_009782273.1|315PREDICTED: uncharacterized protein LOC104231045 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS150F06+ TCATC
JMSF051M13+ ATTCAGGAAGGTCAGGTCTTGCTTTATGCTAAGCATTCTATTATCATC
JMSF025I20+ TCATC
                      ____________________________________________________________
consensus ATTCAGGAAGGTCAGGTCTTGCTTTATGCTAAGCATTCTATTATCATC
 
. : . : . : . : . : . :
JMFS150F06+ AGGGTTCAATTCAGAAGCAGACGATAAAACAAAGGCACATTGCTTCTTCACCTCCTCAAT
JMSF051M13+ AGGCTTCAATTCAGAAGCAGACGATAAAACAAAGGCACATTGCTTCTTCACCTCCTCAAT
JMSF025I20+ AGGCTTCAATTCAGAAGCAGACGATAAAACAAAGGCACATTGCTTCTTCACCTCCTCAAT
                      ____________________________________________________________
consensus AGGCTTCAATTCAGAAGCAGACGATAAAACAAAGGCACATTGCTTCTTCACCTCCTCAAT
 
. : . : . : . : . : . :
JMFS150F06+ TCTTTCATAGCTATAGGTGATGGAATTTCTAGCCCTAGGTTCAAAGTCAAGCCCTCCATA
JMSF051M13+ TCTTTCATAGCTATAGGTGATGGAATTTCTAGCCCTAGGTTCAAAGTCAAGCCCTCCATA
JMSF025I20+ TCTTTCATAGCTATAGGTGATGGAATTTCTAGCCCTAGGTTCAAAGTCAAGCCCTCCATA
JMFS070C12+ GAATTTCTAGCCCTAGGTTCAAAGTCAAGCCCTCCATA
JMFS006F09+ CTATAGGTGATGGAATTTCTAGCCCTAGGTTCAAAGTCAAGCCCTCCATA
                      ____________________________________________________________
consensus TCTTTCATAGCTATAGGTGATGGAATTTCTAGCCCTAGGTTCAAAGTCAAGCCCTCCATA
 
. : . : . : . : . : . :
JMFS150F06+ ATCAGTAAGTTCCGAGTGAGAGAAATCAACTAACAGCAGAAACAATAACCCAATTCCTAA
JMSF051M13+ ATCAGTAAGTTCCGAGTGAGAGAAATCAACTAACAGCAGAAACAATAACCCAATTCCTAA
JMSF025I20+ ATCAGTAAGTTCCGAGTGAGAGAAATCAACTAACAGCAGAAACAATAACCCAATTCCTAA
JMFS070C12+ ATCAGTAAGTTCCGAGTGAGAGAAATCAACTAACAGCAGAAACAATAACCCAATTCCTAA
JMFS006F09+ ATCAGTAAGTTCCGAGTGAGAGAAATCAACTAACAGCAGAAACAATAACCCAATTCCTAA
                      ____________________________________________________________
consensus ATCAGTAAGTTCCGAGTGAGAGAAATCAACTAACAGCAGAAACAATAACCCAATTCCTAA
 
. : . : . : . : . : . :
JMFS150F06+ AACACTCCAAAAATTAGCATAAAAACCCATCATCTTCAAACAAAATCAATTCAATATTTC
JMSF051M13+ AACACTCCAAAAATTAGCATAAAAACCCATCATCTTCAAACAAAATCAATTCAATATTTC
JMSF025I20+ AACACTCCAAAAATTAGCATAAAAACCCATCATCTTCAAACAAAATCAATTCAATATTTC
JMFS070C12+ AACACTCCAAAAATTAGCATAAAAACCCATCATCTTCAAACAAAATCAATTCAATATTTC
JMFS006F09+ AACACTCCAAAAATTAGCATAAAAACCCATCATCTTCAAACAAAATCAATTCAATATTTC
                      ____________________________________________________________
consensus AACACTCCAAAAATTAGCATAAAAACCCATCATCTTCAAACAAAATCAATTCAATATTTC
 
. : . : . : . : . : . :
JMFS150F06+ TCATCAATCCAGTTTCCAAGACTCAGACTTTCAGATACCATTGCAATTCCCGAACATACC
JMSF051M13+ TCATCAATCCAGTTTCCAAGACTCAGACTTTCAGATACCATTGCAATTCCCGAACATACC
JMSF025I20+ TCATCAATCCAGTTTCCAAGACTCAGACTTTCAGATACCATTGCAATTCCCGAACATACC
JMFS070C12+ TCATCAATCCAGTTTCCAAGACTCAGACTTTCAGATACCATTGCAATTCCCGAACATACC
JMFS006F09+ TCATCAATCCAGTTTCCAAGACTCAGACTTTCAGATACCATTGCAATTCCCGAACATACC
                      ____________________________________________________________
consensus TCATCAATCCAGTTTCCAAGACTCAGACTTTCAGATACCATTGCAATTCCCGAACATACC
 
. : . : . : . : . : . :
JMFS150F06+ CATCCCAGAAAATGTTGAACTTCGTATAAACTAACTCCACAATACACACTAAATATCAGC
JMSF051M13+ CATCCCAGAAAATGTTGAACTTCGTATAAACTAACTCCACAATACACACTAAATATCAGC
JMSF025I20+ CATCCCAGAAAATGTTGAACTTCGTATAAACTAACTCCACAATACACACTAAATATCAGC
JMFS070C12+ CATCCCAGAAAATGTTGAACTTCGTATAAACTAACTCCACAATACACACTAAATATCAGC
JMFS006F09+ CATCCCAGAAAATGTTGAACTTCGTATAAACTAACTCCACAATACACACTAAATATCAGC
                      ____________________________________________________________
consensus CATCCCAGAAAATGTTGAACTTCGTATAAACTAACTCCACAATACACACTAAATATCAGC
 
. : . : . : . : . : . :
JMFS150F06+ AAAAGAAACACAAATTCTGCAAATTTCAAAGCCAAAAGCTTCGCATAGCTGGCGTGAGGA
JMSF051M13+ AAAAGAAACACAAATTCTGCAAATTTCAAAGCCAAAAGCTTCGCATAGCTGGCGTGAGGA
JMSF025I20+ AAAAGAAACACAAATTCTGCAAATTTCAAAGCCAAAAGCTTCGCATAGCTGGCGTGAGGA
JMFS070C12+ AAAAGAAACACAAATTCTGCAAATTTCAAAGCCAAAAGCTTCGCATAGCTGGCGTGAGGA
JMFS006F09+ AAAAGAAACACAAATTCTGCAAATTTCAAAGCCAAAAGCTTCGCATAGCTGGCGTGAGGA
                      ____________________________________________________________
consensus AAAAGAAACACAAATTCTGCAAATTTCAAAGCCAAAAGCTTCGCATAGCTGGCGTGAGGA
 
. : . : . : . : . : . :
JMFS150F06+ ACACTTTTACCTGGAAACAGGAAACTGGAATAGGATCGTTCTTTCTTTCTTTTTTTAGCA
JMSF051M13+ ACACTTTTACCTGGAAACAGGAAACTGGAATAGGATCGTTCTTTCTTTCTTTTTTTAGCA
JMSF025I20+ ACACTTTTACCTGGAAACAGGAAACTGGAATAGGATCGTTCTTTCTTTCTTTTTTTAGCA
JMFS070C12+ ACACTTTTACCTGGAAACAGGAAACTGGAATAGGATCGTTCTTTCTTTCTTTTTTTAGCA
JMFS006F09+ ACACTTTTACCTGGAAACAGGAAACTGGAATAGGATCGTTCTTTCTTTCTTTTTTTAGCA
                      ____________________________________________________________
consensus ACACTTTTACCTGGAAACAGGAAACTGGAATAGGATCGTTCTTTCTTTCTTTTTTTAGCA
 
. : . : . : . : . : . :
JMFS150F06+ AGGTAAGACCAGCAACTCGTTAAGAACTTAAGATCTTAGAATTGAAGCAGGGAGTGGGGC
JMSF051M13+ AGGTAAGACCAGCAACTCGTTAAGAACTTAAGATCTTAGAATTGAAGCAGGGAGTGGGGC
JMSF025I20+ AGGTAAGACCAGCAACTCGTTAAGAACTTAAGATCTTAGAATTGAAGCAGGGAGTGGGGC
JMFS070C12+ AGGTAAGACCAGCAACTCGTTAAGAACTTAAGATCTTAGAATTGAAGCAGGGAGTGGGGC
JMFS006F09+ AGGTAAGACCAGCAACTCGTTAAGAACTTAAGATCTTAGAATTGAAGCAGGGAGTGGGGC
                      ____________________________________________________________
consensus AGGTAAGACCAGCAACTCGTTAAGAACTTAAGATCTTAGAATTGAAGCAGGGAGTGGGGC
 
. : . : . : . : . : . :
JMFS150F06+ TTTCAAAACGTTTGGACAGAATTACAGAAAGGAAAAGGGAAGACTGGAGATGGGTCT
JMSF051M13+ TTTCAAAACGTTTGGACAGAATTACAGAAAGGAAAAGGGAAGACTGGAGATGGGTCTGGT
JMSF025I20+ TTTCAAAACGTTTGGACAGAATTACAGAAAGGAAAAGGGAAGACTGGAGATGGGTCTGGT
JMFS070C12+ TTTCAAAACGTTTGGACAGAATTACAGAAAGGAAAAGGGAA
JMFS006F09+ TTTCAAAACGTTTGGACAGAATTACAGAAAGGAAAAGGGAAGACTGGAGATGGGTCTGGT
                      ____________________________________________________________
consensus TTTCAAAACGTTTGGACAGAATTACAGAAAGGAAAAGGGAAGACTGGAGATGGGTCTGGT
 
. : . : . : . : . : . :
JMSF051M13+ GAAGTGGTGAGGACTGAGTAGAAAGGGGTGTGTGAATTGAAAGTCAAATGCC
JMSF025I20+ GAAGTGGTGAGGACTGAGTAGAAAGGGGTGTGTGAATTGAAAGTCAAATGCC
JMFS006F09+ GAAGTGGTGAGGACTGAGTAGAAAGGGGTGTGTGAATTGAAAGTCAAATGCCTATGGGAG
                      ____________________________________________________________
consensus GAAGTGGTGAGGACTGAGTAGAAAGGGGTGTGTGAATTGAAAGTCAAATGCCTATGGGAG