Contig 000346:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002M07Sequence381000346 (9)ref|XP_010056083.1|1e-54PREDICTED: probable cinnamyl alcohol dehydrogenase 1 [Eucalyptus grandis] gb|KC720000346 (9)ref|XP_006360729.1|8e-81PREDICTED: probable cinnamyl alcohol dehydrogenase 1-like isoform X1 [Solanum t
JMFF023H12Sequence500000346 (9)ref|XP_009589196.1|2e-80PREDICTED: probable cinnamyl alcohol dehydrogenase 1 [Nicotiana tomentosiformis718000346 (9)ref|XP_006360729.1|9e-83PREDICTED: probable cinnamyl alcohol dehydrogenase 1-like isoform X1 [Solanum t
JMFN017O06Sequence612000346 (9)ref|XP_009589196.1|2e-104PREDICTED: probable cinnamyl alcohol dehydrogenase 1 [Nicotiana tomentosiformis
JMFN025C09Sequence267000346 (9)ref|XP_004252617.1|6e-21PREDICTED: probable cinnamyl alcohol dehydrogenase 1 [Solanum lycopersicum] ref
JMFN034B16Sequence267000346 (9)ref|XP_004252617.1|6e-21PREDICTED: probable cinnamyl alcohol dehydrogenase 1 [Solanum lycopersicum] ref
JMSF025I11Sequence667000346 (9)ref|XP_009778632.1|4e-111PREDICTED: probable cinnamyl alcohol dehydrogenase 1 [Nicotiana sylvestris] ref792000346 (9)ref|XP_006360729.1|6e-108PREDICTED: probable cinnamyl alcohol dehydrogenase 1-like isoform X1 [Solanum t

Alignment

This contig is upended


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rJMFF023H12-                     GAATATTTAGTACCATAATATNATGTTCATAGNATGGAACTAATNGCTG
rJMFF002M07-                   CTGAATATTTAGTACCATAATATNATGTTCATAGCATGGAACTNATGGCTG
rJMSF025I11-                                           ATGTTCATAGCATGGAACTAATGGCTG
                      ____________________________________________________________
consensus                      CTGAATATTTAGTACCATAATATNATGTTCATAGCATGGAACTAATGGCTG
 
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rJMFF023H12-          TNATGTTTCAACAAATTTTGACAAGATGGAACTTTCAATTCAAAGAATCAGCATCGTTGG
rJMFF002M07-          TCATGTTTCAACAAATTTTGACAAGATGGAACTTTCAATTCAAAGAATCAGCATCGTTGG
rJMSF025I11-          TCATGTTTCAACAAATTTTGACAAGATGGAACTTTCAATTCAAAGAATCAGCATCGTTGG
                      ____________________________________________________________
consensus             TCATGTTTCAACAAATTTTGACAAGATGGAACTTTCAATTCAAAGAATCAGCATCGTTGG
 
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rJMFF023H12-          AGGGCCATCATATTTCTTTGCAACTACCCCCAAACATACATCAACTGAGGAGTTGTGGAA
rJMFF002M07-          AGGGCCATCATATTTCTTTGCAACTACCCCCAAACATACATCANCTGAGGAGTTGTGGAA
rJMSF025I11-          AGGGCCATCATATTTCTTTGCAACTACCCCCAAACATACATCAACTGAGGAGTTGTGGAA
                      ____________________________________________________________
consensus             AGGGCCATCATATTTCTTTGCAACTACCCCCAAACATACATCAACTGAGGAGTTGTGGAA
 
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rJMFF023H12-          AAACAAAAAAGATGAACATCCACCCTATTTGAGGGAGCCCCCNATGTCAATCACGAACCG
rJMFF002M07-          AAACAAAAAAGATGAACATCCACCCTATTTGAGGGAGCCCCCNATGTCAATCACGAACCG
rJMSF025I11-          AAACAAAAAAGATGAACACCCACCCTATTTGAGGGAGCCCCCAATGTCAATCACGAACCG
                      ____________________________________________________________
consensus             AAACAAAAAAGATGAACATCCACCCTATTTGAGGGAGCCCCCAATGTCAATCACGAACCG
 
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rJMFF023H12-          ATATTTCACATCCTTCTTTATTAATCTTTCAAGAGCTTCATTCACATACTGAATAGGAAT
rJMFF002M07-          ATATTTCACATCCTTCTTTATTAATCTTTCAAGAGCTTCATTCACATACTGAATAGGAAT
rJMSF025I11-          ATATTTCACATCCTTCTTTATTAATCTTTCAAGAGCTTCATTCACATACTGAATAGGAAT
                      ____________________________________________________________
consensus             ATATTTCACATCCTTCTTTATTAATCTTTCAAGAGCTTCATTCACATACTGAATAGGAAT
 
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rJMFF023H12-          AATGTCAATTTCTGGGTAAATTTTCCGGGAAGCACAAAATTCCAGCAATTCTTGTGTGAG
rJMFF002M07-          AATGTCAATTTCTGGGTAAATTTTCCGGGAAGCACAAAATTCCAGCAATTCTTGTGTGAG
rJMSF025I11-          AATGTCAATTTCTGGGTAAATTTTCCGGGAAGCACAAAATTCCAGCAATTCTTGTGTGAG
                      ____________________________________________________________
consensus             AATGTCAATTTCTGGGTAAATTTTCCGGGAAGCACAAAATTCCAGCAATTCTTGTGTGAG
 
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rJMFF023H12-          CTTTGTTCCGCCAGTAATGCTCCCAGCAATGCATTTCATACCCAAGTTTANGCTTCCGGG
rJMFF002M07-          CTTTGTTCCGCCAGTAATGCTCCCAGCAATGCATTTCATACCCAAGTTTANGCTTCCGGG
rJMSF025I11-          CTTTGTTCCGCCAGTAATGCTCCCAGCAATGCATTTCATACCCAAGTTTAGGCTTCCGGG
                      ____________________________________________________________
consensus             CTTTGTTCCGCCAGTAATGCTCCCAGCAATGCATTTCATACCCAAGTTTAGGCTTCCGGG
 
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rJMFF023H12-          GCTAAATTTCACTTCGCTAGGGAACCCCACCAAAGCAAGAGTACCAGCTGTCTTCAACAG
rJMFF002M07-          GCTAAATTTCACTTCGCTAGGGAACCCCACCAAAGCAAGAGTACCAGCTGTCTTCAACAG
rJMSF025I11-          GCTAAATTTCACTTCGCTAGGGAACCCCACCAAAGCAAGAGTACCAGCGGTCTTCAACAG
                      ____________________________________________________________
consensus             GCTAAATTTCACTTCGCTAGGGAACCCCACCAAAGCAAGAGTACCAGCTGTCTTCAACAG
 
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rJMFF023H12-          TGACAAGTATAGATCANATGGGATATCTCCAGATGCCGTGTTAATCAGGAAGTCAAATGA
rJMFF002M07-          TGACAAGTATANATCANATGGGATATCTCCAGATGCCGTGTTAATCAAGAAGTCAAATGA
rJMSF025I11-          TGACAAGTATAGATCAAATGGGATATCTCCAGATGCCGTGTTAATCAGGAAGTCAAATGA
                      ____________________________________________________________
consensus             TGACAAGTATAGATCAAATGGGATATCTCCAGATGCCGTGTTAATCAGGAAGTCAAATGA
 
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rJMFF023H12-          TTTAGATAGTGCCATCATCTGTTTTTCATCAGACGAGATCACAAAATTGTCTGCACCAAG
rJMFF002M07-          TTTAGATAGTGCCATCATCTGTTTTTCATCAGACNANATCACAAAATTGTCTGCACCAAG
rJMSF025I11-          TTTAGATAGTGCCATCATCTGTTTTTCATCAGACGAGATCACAAAATTGTCTGCACCAAG
                      ____________________________________________________________
consensus             TTTAGATAGTGCCATCATCTGTTTTTCATCAGACGAGATCACAAAATTGTCTGCACCAAG
 
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rJMFF023H12-          AAGATTCAGAGCTTCTTCTTTCTTTGATATACTGGTGCTGAAAACCGTTACTTTCAATCC
rJMFF002M07-          AAGATTCACAGCTTCTTCTTTCTTTGATATACTGGTGCTGAAAACCGNTACTTTCAATCC
rJMSF025I11-          AAGATTCAGAGCTTCTTCTTTCTTTGATATACTGGTGCTGAAAACCGTTACTTTCAATCC
                      ____________________________________________________________
consensus             AAGATTCAGAGCTTCTTCTTTCTTTGATATACTGGTGCTGAAAACCGTTACTTTCAATCC
 
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rJMFF023H12-          AAAAGCTTTGCCAAACTTCACCGCCAAGTGACCAAGACCACCTAGTCCAATCACACCCNA
rJMFF002M07-          AAAAGCTTTGCCAAACTTCACCGCCAAGTGACCAAGACCACCTAGTCCAATCACACCCNA
rJMSF025I11-          AAAAGCTTTGCCAAACTTCACCGCCAAGTGACCAAGACCACCTAGTCCAATCACACCCAA
JMFN017O06+                                                                CACCCAA
JMSF025I11+                                     AGTGACCAAGACCACCTAGTCCAATCACACCCAA
                      ____________________________________________________________
consensus             AAAAGCTTTGCCAAACTTCACCGCCAAGTGACCAAGACCACCTAGTCCAATCACACCCAA
 
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rJMFF023H12-          TGACTTACC                                                   
rJMFF002M07-          TGACTTACC                                                   
rJMSF025I11-          AGACTTACCAGGCTGATTCATGTTATGTCGCATCATCGGTGTGTACACAGTAATTCCAGC
JMFN017O06+           AGACTTACCAGCTTGATTCATGTGTGTTTGCATCATCGGAGTGTACACAGTAATTCCAGC
JMSF025I11+           AGACTTACCAGGCTGATTCATGTTATGTCGCATCATCGGTGTGTACACAGTAATTCCAGC
                      ____________________________________________________________
consensus             AGACTTACCAGGCTGATTCATGTTATGTCGCATCATCGGTGTGTACACAGTAATTCCAGC
 
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rJMSF025I11-          ACACAACAATGGCGCTGCTGAGGCAAGAGGGTA                           
JMFN017O06+           GCATAACAATGGCGCTGCTGAAGCGAGAGGGTAATTTTCAGGAATGTTATAGCAATACCT
JMSF025I11+           ACACAACAATGGCGCTGCTGAGGCAAGAGGGTAATTTTCTGGAATTTTGTAGCAATACCT
JMFF023H12+                                                            TAGCAATACCT
                      ____________________________________________________________
consensus             ACACAACAATGGCGCTGCTGAGGCAAGAGGGTAATTTTCTGGAATTTTGTAGCAATACCT
 
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JMFN017O06+           TTCATGAACAACAATGTAACTTGAGTATCCTCCCTTAGTGATTGTACCATCCACATCTAC
JMSF025I11+           TTCATGAACAACAATGTAACTAGAGTATCCTCCCTTGGTGACTGTACCATCTACATCGAT
JMFF023H12+           TTCATGAACAACAATGTAACTAGAGTATCCTCCCTTGGTGACTGTACCATCTACATCGAT
                      ____________________________________________________________
consensus             TTCATGAACAACAATGTAACTAGAGTATCCTCCCTTGGTGACTGTACCATCTACATCGAT
 
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JMFN017O06+           GTAATCAAAAGTAAAAACAGATCCCTTTGAACACTGAACTTCTAATCCTTCATTACAATA
JMSF025I11+           GCCATCAAAAGTAAAAACAGATCCCTTTGAACACTGAACTTCTAATCCTTCATTACAATA
JMFF023H12+           GCCATCAAAAGTAAAAACAGATCCCTTTGAACACTGAACTTCTAATCCTTCATTACAATA
JMFF002M07+                                                      AATCCTTCATTACAATA
                      ____________________________________________________________
consensus             GCCATCAAAAGTAAAAACAGATCCCTTTGAACACTGAACTTCTAATCCTTCATTACAATA
 
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JMFN017O06+           CTCACACTCCCTGCAAGAGTTAACATAAGTTCCAACTCCCACAGGGTCACCAACTTTAAA
JMSF025I11+           CTCACACTCCCTGCAAGAGTTAACATAAGTTCCAACTCCCACAGGGTCGCCAACTTTAAA
JMFF023H12+           CTCACACTCCCTGCAAGAGTTAACATAAGTTCCAACTCCCACAGGGTCGCCAACTTTAAA
JMFF002M07+           CTCACACTCCCTGCAAGAGTTAACATAAGTTCCAACTCCCACAGGGTCGCCAACTTTAAA
                      ____________________________________________________________
consensus             CTCACACTCCCTGCAAGAGTTAACATAAGTTCCAACTCCCACAGGGTCGCCAACTTTAAA
 
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JMFN017O06+           CCGCTGGACGTTGGATCCAACGGCTTTCACAATTCCTACAATCTCATGTCCAGGCACTAA
JMSF025I11+           CCGCTGAACCCCAGAACCAACTTCTTTCACAATTCCTACAATCTCATGTCCAGGCACTAA
JMFF023H12+           CCGCTGAACCCCAGAACCAACTTCTTTCACAATTCCTACAATCTCATGTCCAGGCACTAA
JMFF002M07+           CCGCTGAACCCCAGAACCAACTTCTTTCACAATTCCTACAATCTCATGTCCAGGCACTAA
                      ____________________________________________________________
consensus             CCGCTGAACCCCAGAACCAACTTCTTTCACAATTCCTACAATCTCATGTCCAGGCACTAA
 
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JMFN017O06+           AGGGTACTTGGATGTTCCTCCTTCATTCCTTGTCCAGTGAACGTCAGCATAACAGATGCC
JMSF025I11+           AGGGTACTTGGATGTTCCATGTATATTCCTTGTCCAGATAACATCAGCATAACAGACGCC
JMFF023H12+           AGGGTACTTGGATGTTCCATGTATATTCCTTGTCCAGATAACATCAACATAACAGACGCC
JMFF002M07+           AGGGTACTTGGATGTTCCATGTATATTCCTTGTCCAGATAACATCAACATAACAGACGCC
JMFN034B16+                                            CCAGATAACATCAGCATAACAGACGCC
JMFN025C09+                                            CCAGATAACATCAGCATAACAGACGCC
                      ____________________________________________________________
consensus             AGGGTACTTGGATGTTCCATGTATATTCCTTGTCCAGATAACATCAGCATAACAGACGCC
 
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JMFN017O06+           ACAATAAGCAATATCTAGTGAAACATCATCGCTCCCAACAACCCTGCGGCTGAAATTATA
JMSF025I11+           ACAATATGCAATATCTAGTGAAACATCATCACTCCCAACAACCCTGCGGCTAAAATTATA
JMFF023H12+           ACAATATGCAATATCTAGTGAAACATCATCACTCCCAACAACCCTGCGGCTAAAATTATA
JMFF002M07+           ACAATATGCAATATCTAGTGAAACATCATCACTCCCAACAACCCTGCGGCTAAAATTATA
JMFN034B16+           ACAATATGCAATATCTAGTGAAACATCATCACTCCCAACAACCCTGCGGCTAAAATTATA
JMFN025C09+           ACAATATGCAATATCTAGTGAAACATCATCACTCCCAACAACCCTGCGGCTAAAATTATA
                      ____________________________________________________________
consensus             ACAATATGCAATATCTAGTGAAACATCATCACTCCCAACAACCCTGCGGCTAAAATTATA
 
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JMFN017O06+           AGGAGAGAGAAGTCCGGATGAATCTCTGGCAGCCCATCCAAGGCAGTTGT          
JMSF025I11+           AGGAGAGAGAACTCCGGACGGATCTCTGGCAGCCCATCCGAGGCAGTTGTCCGTTGAATG
JMFF023H12+           AGTAGAGAGAACTCCGGACGGATCTCTGGCAGCCCATCCGAGGCAGTTGTCCGTTGAATG
JMFF002M07+           AGTAGAGAGAACTCCGGACGGATCTCTGGCAGCCCATCCGAGGCAGTTGTCCGTTGAATG
JMFN034B16+           AGGAGAGAGAACTCCGGACGGATCTCTGGCAGCCCATCCGAGGCAGTTGTCCGTTGAATG
JMFN025C09+           AGGAGAGAGAACTCCGGACGGATCTCTGGCAGCCCATCCGAGGCAGTTGTCCGTTGAATG
                      ____________________________________________________________
consensus             AGGAGAGAGAACTCCGGACGGATCTCTGGCAGCCCATCCGAGGCAGTTGTCCGTTGAATG
 
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JMSF025I11+           TGAAGAAGCCATGCTTGTAAATTC                                    
JMFF023H12+           TGAAGAAGCCATGCTTGTAAATTCAAATGAACAGCAAGATCCTCCCCGTTTCCGCTTTCA
JMFF002M07+           TGAAGAAGCCATGCTTGTAAATTCAAATGAACAGCAAGATCCTCCCCGTTTCCGCTTTCA
JMFN034B16+           TGAAGAAGCCATGCTTGTAAATTCAAATGAACAGCAAGATCCTCCCCGTTTCCGCTTTCA
JMFN025C09+           TGAAGAAGCCATGCTTGTAAATTCAAATGAACAGCAAGATCCTCCCCGTTTCCGCTTTCA
                      ____________________________________________________________
consensus             TGAAGAAGCCATGCTTGTAAATTCAAATGAACAGCAAGATCCTCCCCGTTTCCGCTTTCA
 
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JMFN034B16+           GTTCGAATGTTGACTGAAGATAACGCCTCAGCCTATTATGTTTCGTTGGATTGCGATTGA
JMFN025C09+           GTTCGAATGTTGACTGAAGATAACGCCTCAGCCTATTATGTTTCGTTGGATTGCGATTGA
                      ____________________________________________________________
consensus             GTTCGAATGTTGACTGAAGATAACGCCTCAGCCTATTATGTTTCGTTGGATTGCGATTGA