clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF002M07 | Sequence | 381 | 000346 (9) | ref|XP_010056083.1| | 1e-54 | PREDICTED: probable cinnamyl alcohol dehydrogenase 1 [Eucalyptus grandis] gb|KC | 720 | 000346 (9) | ref|XP_006360729.1| | 8e-81 | PREDICTED: probable cinnamyl alcohol dehydrogenase 1-like isoform X1 [Solanum t |
JMFF023H12 | Sequence | 500 | 000346 (9) | ref|XP_009589196.1| | 2e-80 | PREDICTED: probable cinnamyl alcohol dehydrogenase 1 [Nicotiana tomentosiformis | 718 | 000346 (9) | ref|XP_006360729.1| | 9e-83 | PREDICTED: probable cinnamyl alcohol dehydrogenase 1-like isoform X1 [Solanum t |
JMFN017O06 | Sequence | 612 | 000346 (9) | ref|XP_009589196.1| | 2e-104 | PREDICTED: probable cinnamyl alcohol dehydrogenase 1 [Nicotiana tomentosiformis | |||||
JMFN025C09 | Sequence | 267 | 000346 (9) | ref|XP_004252617.1| | 6e-21 | PREDICTED: probable cinnamyl alcohol dehydrogenase 1 [Solanum lycopersicum] ref | |||||
JMFN034B16 | Sequence | 267 | 000346 (9) | ref|XP_004252617.1| | 6e-21 | PREDICTED: probable cinnamyl alcohol dehydrogenase 1 [Solanum lycopersicum] ref | |||||
JMSF025I11 | Sequence | 667 | 000346 (9) | ref|XP_009778632.1| | 4e-111 | PREDICTED: probable cinnamyl alcohol dehydrogenase 1 [Nicotiana sylvestris] ref | 792 | 000346 (9) | ref|XP_006360729.1| | 6e-108 | PREDICTED: probable cinnamyl alcohol dehydrogenase 1-like isoform X1 [Solanum t |
This contig is upended
. : . : . : . : . : . :
rJMFF023H12- GAATATTTAGTACCATAATATNATGTTCATAGNATGGAACTAATNGCTG
rJMFF002M07- CTGAATATTTAGTACCATAATATNATGTTCATAGCATGGAACTNATGGCTG
rJMSF025I11- ATGTTCATAGCATGGAACTAATGGCTG
____________________________________________________________
consensus CTGAATATTTAGTACCATAATATNATGTTCATAGCATGGAACTAATGGCTG
. : . : . : . : . : . :
rJMFF023H12- TNATGTTTCAACAAATTTTGACAAGATGGAACTTTCAATTCAAAGAATCAGCATCGTTGG
rJMFF002M07- TCATGTTTCAACAAATTTTGACAAGATGGAACTTTCAATTCAAAGAATCAGCATCGTTGG
rJMSF025I11- TCATGTTTCAACAAATTTTGACAAGATGGAACTTTCAATTCAAAGAATCAGCATCGTTGG
____________________________________________________________
consensus TCATGTTTCAACAAATTTTGACAAGATGGAACTTTCAATTCAAAGAATCAGCATCGTTGG
. : . : . : . : . : . :
rJMFF023H12- AGGGCCATCATATTTCTTTGCAACTACCCCCAAACATACATCAACTGAGGAGTTGTGGAA
rJMFF002M07- AGGGCCATCATATTTCTTTGCAACTACCCCCAAACATACATCANCTGAGGAGTTGTGGAA
rJMSF025I11- AGGGCCATCATATTTCTTTGCAACTACCCCCAAACATACATCAACTGAGGAGTTGTGGAA
____________________________________________________________
consensus AGGGCCATCATATTTCTTTGCAACTACCCCCAAACATACATCAACTGAGGAGTTGTGGAA
. : . : . : . : . : . :
rJMFF023H12- AAACAAAAAAGATGAACATCCACCCTATTTGAGGGAGCCCCCNATGTCAATCACGAACCG
rJMFF002M07- AAACAAAAAAGATGAACATCCACCCTATTTGAGGGAGCCCCCNATGTCAATCACGAACCG
rJMSF025I11- AAACAAAAAAGATGAACACCCACCCTATTTGAGGGAGCCCCCAATGTCAATCACGAACCG
____________________________________________________________
consensus AAACAAAAAAGATGAACATCCACCCTATTTGAGGGAGCCCCCAATGTCAATCACGAACCG
. : . : . : . : . : . :
rJMFF023H12- ATATTTCACATCCTTCTTTATTAATCTTTCAAGAGCTTCATTCACATACTGAATAGGAAT
rJMFF002M07- ATATTTCACATCCTTCTTTATTAATCTTTCAAGAGCTTCATTCACATACTGAATAGGAAT
rJMSF025I11- ATATTTCACATCCTTCTTTATTAATCTTTCAAGAGCTTCATTCACATACTGAATAGGAAT
____________________________________________________________
consensus ATATTTCACATCCTTCTTTATTAATCTTTCAAGAGCTTCATTCACATACTGAATAGGAAT
. : . : . : . : . : . :
rJMFF023H12- AATGTCAATTTCTGGGTAAATTTTCCGGGAAGCACAAAATTCCAGCAATTCTTGTGTGAG
rJMFF002M07- AATGTCAATTTCTGGGTAAATTTTCCGGGAAGCACAAAATTCCAGCAATTCTTGTGTGAG
rJMSF025I11- AATGTCAATTTCTGGGTAAATTTTCCGGGAAGCACAAAATTCCAGCAATTCTTGTGTGAG
____________________________________________________________
consensus AATGTCAATTTCTGGGTAAATTTTCCGGGAAGCACAAAATTCCAGCAATTCTTGTGTGAG
. : . : . : . : . : . :
rJMFF023H12- CTTTGTTCCGCCAGTAATGCTCCCAGCAATGCATTTCATACCCAAGTTTANGCTTCCGGG
rJMFF002M07- CTTTGTTCCGCCAGTAATGCTCCCAGCAATGCATTTCATACCCAAGTTTANGCTTCCGGG
rJMSF025I11- CTTTGTTCCGCCAGTAATGCTCCCAGCAATGCATTTCATACCCAAGTTTAGGCTTCCGGG
____________________________________________________________
consensus CTTTGTTCCGCCAGTAATGCTCCCAGCAATGCATTTCATACCCAAGTTTAGGCTTCCGGG
. : . : . : . : . : . :
rJMFF023H12- GCTAAATTTCACTTCGCTAGGGAACCCCACCAAAGCAAGAGTACCAGCTGTCTTCAACAG
rJMFF002M07- GCTAAATTTCACTTCGCTAGGGAACCCCACCAAAGCAAGAGTACCAGCTGTCTTCAACAG
rJMSF025I11- GCTAAATTTCACTTCGCTAGGGAACCCCACCAAAGCAAGAGTACCAGCGGTCTTCAACAG
____________________________________________________________
consensus GCTAAATTTCACTTCGCTAGGGAACCCCACCAAAGCAAGAGTACCAGCTGTCTTCAACAG
. : . : . : . : . : . :
rJMFF023H12- TGACAAGTATAGATCANATGGGATATCTCCAGATGCCGTGTTAATCAGGAAGTCAAATGA
rJMFF002M07- TGACAAGTATANATCANATGGGATATCTCCAGATGCCGTGTTAATCAAGAAGTCAAATGA
rJMSF025I11- TGACAAGTATAGATCAAATGGGATATCTCCAGATGCCGTGTTAATCAGGAAGTCAAATGA
____________________________________________________________
consensus TGACAAGTATAGATCAAATGGGATATCTCCAGATGCCGTGTTAATCAGGAAGTCAAATGA
. : . : . : . : . : . :
rJMFF023H12- TTTAGATAGTGCCATCATCTGTTTTTCATCAGACGAGATCACAAAATTGTCTGCACCAAG
rJMFF002M07- TTTAGATAGTGCCATCATCTGTTTTTCATCAGACNANATCACAAAATTGTCTGCACCAAG
rJMSF025I11- TTTAGATAGTGCCATCATCTGTTTTTCATCAGACGAGATCACAAAATTGTCTGCACCAAG
____________________________________________________________
consensus TTTAGATAGTGCCATCATCTGTTTTTCATCAGACGAGATCACAAAATTGTCTGCACCAAG
. : . : . : . : . : . :
rJMFF023H12- AAGATTCAGAGCTTCTTCTTTCTTTGATATACTGGTGCTGAAAACCGTTACTTTCAATCC
rJMFF002M07- AAGATTCACAGCTTCTTCTTTCTTTGATATACTGGTGCTGAAAACCGNTACTTTCAATCC
rJMSF025I11- AAGATTCAGAGCTTCTTCTTTCTTTGATATACTGGTGCTGAAAACCGTTACTTTCAATCC
____________________________________________________________
consensus AAGATTCAGAGCTTCTTCTTTCTTTGATATACTGGTGCTGAAAACCGTTACTTTCAATCC
. : . : . : . : . : . :
rJMFF023H12- AAAAGCTTTGCCAAACTTCACCGCCAAGTGACCAAGACCACCTAGTCCAATCACACCCNA
rJMFF002M07- AAAAGCTTTGCCAAACTTCACCGCCAAGTGACCAAGACCACCTAGTCCAATCACACCCNA
rJMSF025I11- AAAAGCTTTGCCAAACTTCACCGCCAAGTGACCAAGACCACCTAGTCCAATCACACCCAA
JMFN017O06+ CACCCAA
JMSF025I11+ AGTGACCAAGACCACCTAGTCCAATCACACCCAA
____________________________________________________________
consensus AAAAGCTTTGCCAAACTTCACCGCCAAGTGACCAAGACCACCTAGTCCAATCACACCCAA
. : . : . : . : . : . :
rJMFF023H12- TGACTTACC
rJMFF002M07- TGACTTACC
rJMSF025I11- AGACTTACCAGGCTGATTCATGTTATGTCGCATCATCGGTGTGTACACAGTAATTCCAGC
JMFN017O06+ AGACTTACCAGCTTGATTCATGTGTGTTTGCATCATCGGAGTGTACACAGTAATTCCAGC
JMSF025I11+ AGACTTACCAGGCTGATTCATGTTATGTCGCATCATCGGTGTGTACACAGTAATTCCAGC
____________________________________________________________
consensus AGACTTACCAGGCTGATTCATGTTATGTCGCATCATCGGTGTGTACACAGTAATTCCAGC
. : . : . : . : . : . :
rJMSF025I11- ACACAACAATGGCGCTGCTGAGGCAAGAGGGTA
JMFN017O06+ GCATAACAATGGCGCTGCTGAAGCGAGAGGGTAATTTTCAGGAATGTTATAGCAATACCT
JMSF025I11+ ACACAACAATGGCGCTGCTGAGGCAAGAGGGTAATTTTCTGGAATTTTGTAGCAATACCT
JMFF023H12+ TAGCAATACCT
____________________________________________________________
consensus ACACAACAATGGCGCTGCTGAGGCAAGAGGGTAATTTTCTGGAATTTTGTAGCAATACCT
. : . : . : . : . : . :
JMFN017O06+ TTCATGAACAACAATGTAACTTGAGTATCCTCCCTTAGTGATTGTACCATCCACATCTAC
JMSF025I11+ TTCATGAACAACAATGTAACTAGAGTATCCTCCCTTGGTGACTGTACCATCTACATCGAT
JMFF023H12+ TTCATGAACAACAATGTAACTAGAGTATCCTCCCTTGGTGACTGTACCATCTACATCGAT
____________________________________________________________
consensus TTCATGAACAACAATGTAACTAGAGTATCCTCCCTTGGTGACTGTACCATCTACATCGAT
. : . : . : . : . : . :
JMFN017O06+ GTAATCAAAAGTAAAAACAGATCCCTTTGAACACTGAACTTCTAATCCTTCATTACAATA
JMSF025I11+ GCCATCAAAAGTAAAAACAGATCCCTTTGAACACTGAACTTCTAATCCTTCATTACAATA
JMFF023H12+ GCCATCAAAAGTAAAAACAGATCCCTTTGAACACTGAACTTCTAATCCTTCATTACAATA
JMFF002M07+ AATCCTTCATTACAATA
____________________________________________________________
consensus GCCATCAAAAGTAAAAACAGATCCCTTTGAACACTGAACTTCTAATCCTTCATTACAATA
. : . : . : . : . : . :
JMFN017O06+ CTCACACTCCCTGCAAGAGTTAACATAAGTTCCAACTCCCACAGGGTCACCAACTTTAAA
JMSF025I11+ CTCACACTCCCTGCAAGAGTTAACATAAGTTCCAACTCCCACAGGGTCGCCAACTTTAAA
JMFF023H12+ CTCACACTCCCTGCAAGAGTTAACATAAGTTCCAACTCCCACAGGGTCGCCAACTTTAAA
JMFF002M07+ CTCACACTCCCTGCAAGAGTTAACATAAGTTCCAACTCCCACAGGGTCGCCAACTTTAAA
____________________________________________________________
consensus CTCACACTCCCTGCAAGAGTTAACATAAGTTCCAACTCCCACAGGGTCGCCAACTTTAAA
. : . : . : . : . : . :
JMFN017O06+ CCGCTGGACGTTGGATCCAACGGCTTTCACAATTCCTACAATCTCATGTCCAGGCACTAA
JMSF025I11+ CCGCTGAACCCCAGAACCAACTTCTTTCACAATTCCTACAATCTCATGTCCAGGCACTAA
JMFF023H12+ CCGCTGAACCCCAGAACCAACTTCTTTCACAATTCCTACAATCTCATGTCCAGGCACTAA
JMFF002M07+ CCGCTGAACCCCAGAACCAACTTCTTTCACAATTCCTACAATCTCATGTCCAGGCACTAA
____________________________________________________________
consensus CCGCTGAACCCCAGAACCAACTTCTTTCACAATTCCTACAATCTCATGTCCAGGCACTAA
. : . : . : . : . : . :
JMFN017O06+ AGGGTACTTGGATGTTCCTCCTTCATTCCTTGTCCAGTGAACGTCAGCATAACAGATGCC
JMSF025I11+ AGGGTACTTGGATGTTCCATGTATATTCCTTGTCCAGATAACATCAGCATAACAGACGCC
JMFF023H12+ AGGGTACTTGGATGTTCCATGTATATTCCTTGTCCAGATAACATCAACATAACAGACGCC
JMFF002M07+ AGGGTACTTGGATGTTCCATGTATATTCCTTGTCCAGATAACATCAACATAACAGACGCC
JMFN034B16+ CCAGATAACATCAGCATAACAGACGCC
JMFN025C09+ CCAGATAACATCAGCATAACAGACGCC
____________________________________________________________
consensus AGGGTACTTGGATGTTCCATGTATATTCCTTGTCCAGATAACATCAGCATAACAGACGCC
. : . : . : . : . : . :
JMFN017O06+ ACAATAAGCAATATCTAGTGAAACATCATCGCTCCCAACAACCCTGCGGCTGAAATTATA
JMSF025I11+ ACAATATGCAATATCTAGTGAAACATCATCACTCCCAACAACCCTGCGGCTAAAATTATA
JMFF023H12+ ACAATATGCAATATCTAGTGAAACATCATCACTCCCAACAACCCTGCGGCTAAAATTATA
JMFF002M07+ ACAATATGCAATATCTAGTGAAACATCATCACTCCCAACAACCCTGCGGCTAAAATTATA
JMFN034B16+ ACAATATGCAATATCTAGTGAAACATCATCACTCCCAACAACCCTGCGGCTAAAATTATA
JMFN025C09+ ACAATATGCAATATCTAGTGAAACATCATCACTCCCAACAACCCTGCGGCTAAAATTATA
____________________________________________________________
consensus ACAATATGCAATATCTAGTGAAACATCATCACTCCCAACAACCCTGCGGCTAAAATTATA
. : . : . : . : . : . :
JMFN017O06+ AGGAGAGAGAAGTCCGGATGAATCTCTGGCAGCCCATCCAAGGCAGTTGT
JMSF025I11+ AGGAGAGAGAACTCCGGACGGATCTCTGGCAGCCCATCCGAGGCAGTTGTCCGTTGAATG
JMFF023H12+ AGTAGAGAGAACTCCGGACGGATCTCTGGCAGCCCATCCGAGGCAGTTGTCCGTTGAATG
JMFF002M07+ AGTAGAGAGAACTCCGGACGGATCTCTGGCAGCCCATCCGAGGCAGTTGTCCGTTGAATG
JMFN034B16+ AGGAGAGAGAACTCCGGACGGATCTCTGGCAGCCCATCCGAGGCAGTTGTCCGTTGAATG
JMFN025C09+ AGGAGAGAGAACTCCGGACGGATCTCTGGCAGCCCATCCGAGGCAGTTGTCCGTTGAATG
____________________________________________________________
consensus AGGAGAGAGAACTCCGGACGGATCTCTGGCAGCCCATCCGAGGCAGTTGTCCGTTGAATG
. : . : . : . : . : . :
JMSF025I11+ TGAAGAAGCCATGCTTGTAAATTC
JMFF023H12+ TGAAGAAGCCATGCTTGTAAATTCAAATGAACAGCAAGATCCTCCCCGTTTCCGCTTTCA
JMFF002M07+ TGAAGAAGCCATGCTTGTAAATTCAAATGAACAGCAAGATCCTCCCCGTTTCCGCTTTCA
JMFN034B16+ TGAAGAAGCCATGCTTGTAAATTCAAATGAACAGCAAGATCCTCCCCGTTTCCGCTTTCA
JMFN025C09+ TGAAGAAGCCATGCTTGTAAATTCAAATGAACAGCAAGATCCTCCCCGTTTCCGCTTTCA
____________________________________________________________
consensus TGAAGAAGCCATGCTTGTAAATTCAAATGAACAGCAAGATCCTCCCCGTTTCCGCTTTCA
. : . : . : . : . : . :
JMFN034B16+ GTTCGAATGTTGACTGAAGATAACGCCTCAGCCTATTATGTTTCGTTGGATTGCGATTGA
JMFN025C09+ GTTCGAATGTTGACTGAAGATAACGCCTCAGCCTATTATGTTTCGTTGGATTGCGATTGA
____________________________________________________________
consensus GTTCGAATGTTGACTGAAGATAACGCCTCAGCCTATTATGTTTCGTTGGATTGCGATTGA