Contig 000339:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003J20Sequence355000339 (18)ref|XP_009763379.1|9e-33PREDICTED: 40S ribosomal protein S12-like [Nicotiana sylvestris]669000339 (18)emb|CDO97587.1|2e-75unnamed protein product [Coffea canephora]
JMFF006A01Sequence422000339 (18)ref|XP_009763379.1|2e-60PREDICTED: 40S ribosomal protein S12-like [Nicotiana sylvestris]698000339 (18)emb|CDO97587.1|2e-75unnamed protein product [Coffea canephora]
JMFF017P06Sequence578000339 (18)emb|CDO97587.1|5e-76unnamed protein product [Coffea canephora]700000339 (18)emb|CDO97587.1|2e-75unnamed protein product [Coffea canephora]
JMFN012E09Sequence627000339 (18)emb|CDO97587.1|5e-79unnamed protein product [Coffea canephora]
JMFN014G06Sequence599000339 (18)emb|CDO97587.1|6e-76unnamed protein product [Coffea canephora]
JMFN014N10Sequence566000339 (18)emb|CDO97587.1|4e-76unnamed protein product [Coffea canephora]
JMFN018K14Sequence613000339 (18)emb|CDO97587.1|7e-76unnamed protein product [Coffea canephora]
JMFN028B13Sequence632000339 (18)emb|CDO97587.1|1e-75unnamed protein product [Coffea canephora]
JMFN032A01Sequence610000339 (18)emb|CDO97587.1|7e-76unnamed protein product [Coffea canephora]
JMFN032B06Sequence618000339 (18)emb|CDO97587.1|8e-76unnamed protein product [Coffea canephora]
JMFN039H14Sequence613000339 (18)emb|CDO97587.1|8e-76unnamed protein product [Coffea canephora]
JMFN043L04Sequence598000339 (18)emb|CDO97587.1|6e-76unnamed protein product [Coffea canephora]
JMFN046G24Sequence591000339 (18)emb|CDO97587.1|6e-76unnamed protein product [Coffea canephora]
JMSF047M19Sequence724000339 (18)emb|CDO97587.1|3e-75unnamed protein product [Coffea canephora]705000339 (18)emb|CDO97587.1|2e-75unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF006A01- GCAATCAAATTAAATTGTCAAGTTCAGATGAGATT
rJMFF003J20- T
rJMSF047M19- T
JMSF047M19+ T
                      ____________________________________________________________
consensus GCAATCAAATTAAATTGTCAAGTTCAGATGAGATT
 
. : . : . : . : . : . :
rJMFF006A01- TTTGCCCAAAAATAAAAATGATGGACAGGCCATCAAGTGAAAATCCTCACAATTTGTCTA
rJMFF003J20- TTTGCCCAAAAATAAAAATGATGGACAGGCCATCAAGTGAAAATCCTCACAATTTGTCTA
rJMSF047M19- TTTGCCCAAAAATAAAAATGATGGACAGGCCATCAAGTGAAAATCCTCACAATTTGTCTA
JMFN028B13+ ATCCTCACAATTGTGCTA
rJMFF017P06- AAATGATGGACAGGCCATCAAGTGAAAATCCTCACAATTTGTCTA
JMSF047M19+ TTTGCCCAAAAATAAAAATGATGGACAGGCCATCAAGTGAAAATCCTCACAATTTGTCTA
                      ____________________________________________________________
consensus TTTGCCCAAAAATAAAAATGATGGACAGGCCATCAAGTGAAAATCCTCACAATTTGTCTA
 
. : . : . : . : . : . :
rJMFF006A01- TTAAGCTCAATCTAC-TTCAAGCTACATACCCAAAAACACAGTTCAAGACAATGTCTTCA
rJMFF003J20- TTAAGCTCAATCTAC-TTCAAGCTACATACCCAAAAACACAGTTCAAGACAATGTCTTCA
rJMSF047M19- TTAAGCTCAATCTAC-TTCAAGCTACATACCCAAAAACACAGTTCAAGACAATGTCTTCA
JMFN028B13+ TTAAGCTCAATCTAC-TTCAAGCTACATACCCAAAAACACAGTTCAAGACAATGTCTTCA
JMFN014G06+ CCAAAAACACAGTTCAAGACAATGTCTTCA
JMFN046G24+ TCAAGACAATGTCTTCA
JMFN039H14+ CTACATACCCAAAAACACAGTTCAAGACAATGTCTTCA
JMFN014N10+ TGTCTTCA
JMFN032A01+ TTCAAGCTACATACCCAAAAACACAGTTCAAGACAATGTCTTCA
rJMFF017P06- TTAAGCTCAATCTAC-TTCAAGCTACATACCCAAAAACACAGTTCAAGACAATGTCTTCA
JMSF047M19+ TTAAGCTCAATCTACTTTCAAGCTACATACCCAAAAACACAGTTCAAGACAATGTCTTCA
JMFN012E09+ GTTCAAGACAATGTCTTCA
                      ____________________________________________________________
consensus TTAAGCTCAATCTAC-TTCAAGCTACATACCCAAAAACACAGTTCAAGACAATGTCTTCA
 
. : . : . : . : . : . :
rJMFF006A01- ACATATCATTCATTTCTCAAATGCAAAGGCAGTTTTGTGTTGATGCTTCAATGGCAAGAG
rJMFF003J20- ACATATCATTCATTTCTCAAATGCAAAGGCAGTTTTGTGTTGATGCTTCAATGGCAAGAG
rJMSF047M19- ACATATCATTCATTTCTCAAATGCAAAGGCAGTTTTGTGTTGATGCTTCAATGGCAAGAG
JMFN028B13+ ACATATCATTCATTTCTCAAATGCAAAGGCAGTTTTGTGTTGATGCTTCAATGGCAAGAG
JMFN014G06+ ACATATCATTCATTTCTCAAATGCAAAGGCAGTTTTGTGTTGATGCTTCAATGGCAAGAG
JMFN046G24+ ACATATCATTCATTCTTCAAATGCAAAGGCAGTTTTGTGTTGATGCTTCAATGGCAAGAG
JMFN039H14+ ACATATCATTCATTTCTCAAATGCAAAGGCAGTTTTGTGTTGATGCTTCAATGGCAAGAG
JMFN014N10+ ACATATCATTCATTTCTCAAATGCAAAGGCAGTTTTGTGTTGATGCTTCAATGGCAAGAG
JMFN032A01+ ACATATCATTCATTTCTCAAATGCAAAGGCAGTTTTGTGTTGATGCTTCAATGGCAAGAG
rJMFF017P06- ACATATCATTCATTTCTCAAATGCAAAGGCAGTTTTGTGTTGATGCTTCAATGGCAAGAG
JMSF047M19+ ACATATCATTCATTTCTCAAATGCAAAGGCAGTTTTGTGTTGATGCTTCAATGGCAAGAG
JMFF017P06+ CAAATGCAAAGGCAGTTTTGTGTTGATGCTTCAATGGCAAGAG
JMFN012E09+ ACATATCATTCATTTCTCAAATGCAAAGGCAGTTTTGTGTTGATGCTTCAATGGCAAGAG
JMFN032B06+ ATGCTTCAATGGCAAGAG
JMFN018K14+ TCAATGGCAAGAG
                      ____________________________________________________________
consensus ACATATCATTCATTTCTCAAATGCAAAGGCAGTTTTGTGTTGATGCTTCAATGGCAAGAG
 
. : . : . : . : . : . :
rJMFF006A01- ACCTTCATCCATCAGCTATCTAACGGGACTTAATGTAATCCTGAACTATATGATAGCCCT
rJMFF003J20- ACCTTCATCCATCAGCTATCTAACGGGACTTAATGTAATCCTGAACTATATGATAGCCCT
rJMSF047M19- ACCTTCATCCATCAGCTATCTAACGGGACTTAATGTAATCCTGAACTATATGATAGCCCT
JMFN028B13+ ACCTTCATCCATCAGCTATCTAACGGGACTTAATGTAATCCTGAACTATATGATAGCCCT
JMFN014G06+ ACCTTCATCCATCAGCTATCTAACGGGACTTAATGTAATCCTGAACTATATGATAGCCCT
JMFN046G24+ ACCTTCATCCATCAGCTATCTAACGGGACTTAATGTAATCCTGAACTATATGATAGCCCT
JMFN039H14+ ACCTTCATCCATCAGCTATCTAACGGGACTTAATGTAATCCTGAACTATATGATAGCCCT
JMFN014N10+ ACCTTTATCCATCAGCTATCTAACGGGACTTAATGTAATCCTGAACTATATGATAGCCCT
JMFN032A01+ ACCTTCATCCATCAGCTATCTAACGGGACTTAATGTAATCCTGAACTATATGATAGCCCT
rJMFF017P06- ACCTTCATCCATCAGCTATCTAACGGGACTTAATGTAATCCTGAACTATATGATAGCCCT
JMSF047M19+ ACCTTCATCCATCAGCTATCTAACGGGACTTAATGTAATCCTGAACTATATGATAGCCCT
JMFF017P06+ ACCTTCATCCATCAGCTATCTAACGGGACTTAATGTAATCCTGAACTATATGATAGCCCT
JMFN012E09+ ACCTTCATCCATCAGCTATCTAACGGGACTTAATGTAATCCTGAACTATATGATAGCCCT
JMFN032B06+ ACCTTCATCCATCAGCTATCTAACGGGACTTAATGTAATCCTGAACTATATGATAGCCCT
JMFN043L04+ CTTCATCCATCAGCTATCTAACGGGACTTAATGTAATCCTGAACTATATGATAGCCCT
JMFN018K14+ ACCTTCATCCATCAGCTATCTAACGGGACTTAATGTAATCCTGAACTATATGATAGCCCT
                      ____________________________________________________________
consensus ACCTTCATCCATCAGCTATCTAACGGGACTTAATGTAATCCTGAACTATATGATAGCCCT
 
. : . : . : . : . : . :
rJMFF006A01- CGTGCTCTTCTCCAAAATCCTTCACAACAGCACAGGAGCAACCAACAACCTTCCTTGCCT
rJMFF003J20- CGTGCTCTTCTCCAAAATCCTTCACAACAGCACAGGAGCAACCAACAACCTTCCTTGCCT
rJMSF047M19- CGTGCTCTTCTCCAAAATCCTTCACAACAGCACAGGAGCAACCAACAACCTTCCTTGCCT
JMFN028B13+ CGTGCTCTTCTCCAAAATCCTTCACAACAGCACAGGAGCAACCAACAACCTTCCTTGCCT
JMFN014G06+ CGTGCTCTTCTCCAAAATCCTTCACAACAGCACAGGAGCAACCAACAACCTTCCTTGCCT
JMFN046G24+ CGTGCTCTTCTCCAAAATCCTTCACAACAGCACAGGAGCAACCAACAACCTTCCTTGCCT
JMFN039H14+ CGTGCTCTTCTCCAAAATCCTTCACAACAGCACAGGAGCAACCAACAACCTTCCTTGCCT
JMFN014N10+ CGTGCTCTTCTCCAAAATCCTTCACAACAGCACAGGAGCAACCAACAACCTTCCTTGCCT
JMFN032A01+ CGTGCTCTTCTCCAAAATCCTTCACAACAGCACAGGAGCAACCAACAACCTTCCTTGCCT
rJMFF017P06- CGTGCTCTTCTCCAAAATCCTTCACAACAGCACAGGAGCAACCAACAACCTTCCTTGCCT
JMSF047M19+ CGTGCTCTTCTCCAAAATCCTTCACAACAGCACAGGAGCAACCAACAACCTTCCTTGCCT
JMFF017P06+ CGTGCTCTTCTCCAAAATCCTTCACAACAGCACAGGAGCAACCAACAACCTTCCTTGCCT
JMFN012E09+ CGTGCTCTTCTCCAAAATCCTTCACAACAGCACAGGAGCAACCAACAACCTTCCTTGCCT
JMFN032B06+ CGTGCTCTTCTCCAAAATCCTTCACAACAGCACAGGAGCAACCAACAACCTTCCTTGCCT
JMFN043L04+ CGTGCTCTTCTCCAAAATCCTTCACAACAGCACAGGAGCAACCAACAACCTTCCTTGCCT
JMFF006A01+ CT
JMFN018K14+ CGTGCTCTTCTCCAAAATCCTTCACAACAGCACAGGAGCAACCAACAACCTTCCTTGCCT
                      ____________________________________________________________
consensus CGTGCTCTTCTCCAAAATCCTTCACAACAGCACAGGAGCAACCAACAACCTTCCTTGCCT
 
. : . : . : . : . : . :
rJMFF006A01- TCCCTTCAGAATCAATCTTGCACAAACCAACCCACTCGCCAAGAGTTTTAGCACTGGGCA
rJMFF003J20- TCCCTTCAGAATCAATCTTGCACAAACCAACCCACTCGCCAAGAGTTTTAGCACTGGGCA
rJMSF047M19- TCCCTTCAGAATCAATCTTGCACAAACCAACCCACTCGCCAAGAGTTTTAGCACTGGGCA
JMFN028B13+ TCCCTTCAGAATCAATCTTGCACAAACCAACCCACTCGCCAAGAGTTTTAGCACTGGGCA
JMFN014G06+ TCCCTTCAGAATCAATCTTGCACAAACCAACCCACTCGCCAAGAGTTTTAGCACTGGGCA
JMFN046G24+ TCCCTTCAGAATCAATCTTGCACAAACCAACCCACTCGCCAAGAGTTTTAGCACTGGGCA
JMFN039H14+ TCCCTTCAGAATCAATCTTGCACAAACCAACCCACTCGCCAAGAGTTTTAGCACTGGGCA
JMFN014N10+ TCCCTTCAGAATCAATCTTGCACAAACCAACCCACTCGCCAAGAGTTTTAGCACTGGGCA
JMFN032A01+ TCCCTTCAGAATCAATCTTGCACAAACCAACCCACTCGCCAAGAGTTTTAGCACTGGGCA
rJMFF017P06- TCCCTTCAGAATCAATCTTGCACAAACCAACCCACTCGCCAAGAGTTTTAGCACTGGGCA
JMSF047M19+ TCCCTTCAGAATCAATCTTGCACAAACCAACCCACTCGCCAAGAGTTTTAGCACTGGGCA
JMFF017P06+ TCCCTTCAGAATCAATCTTGCACAAACCAACCCACTCGCCAAGAGTTTTAGCACTGGGCA
JMFN012E09+ TCCCTTCAGAATCAATCTTGCACAAACCAACCCACTCGCCAAGAGTTTTAGCACTGGGCA
JMFN032B06+ TCCCTTCAGAATCAATCTTGCACAAACCAACCCACTCGCCAAGAGTTTTAGCACTGGGCA
JMFN043L04+ TCCCTTCAGAATCAATCTTGCACAAACCAACCCACTCGCCAAGAGTTTTAGCACTGGGCA
JMFF006A01+ TCCCTTCAGAATCAATCTTGCACAAACCAACCCACTCGCCAAGAGTTTTAGCACTGGGCA
JMFN018K14+ TCCCTTCAGAATCAATCTTGCACAAACCAACCCACTCGCCAAGAGTTTTAGCACTGGGCA
                      ____________________________________________________________
consensus TCCCTTCAGAATCAATCTTGCACAAACCAACCCACTCGCCAAGAGTTTTAGCACTGGGCA
 
. : . : . : . : . : . :
rJMFF006A01- CTGTAATCAAATTGACGTTGTGATCAGCGCAGAGTGCTTTCACCAGTTTGACGTAGTCTG
rJMFF003J20- CTGTAATCAAATTGACGTTGTGATCAGCGCAGAGTGCTTTCACCAGTTTGACGTAGTCTG
rJMSF047M19- CTGTAATCAAATTGACGTTGTGATCAGCGCAGAGTGCTTTCACCAGTTTGACGTAGTCTG
JMFN028B13+ CTGTAATCAAATTGACGTTGTGATCAGCGCAGAGTGCTTTCACCAGTTTGACGTAGTCTG
JMFN014G06+ CTGTAATCAAATTGACGTTGTGATCAGCGCAGAGTGCTTTCACCAGTTTGACGTAGTCTG
JMFN046G24+ CTGTAATCAAATTGACGTTGTGATCAGCGCAGAGTGCTTTCACCAGTTTGACGTAGTCTG
JMFN039H14+ CTGTAATCAAATTGACGTTGTGATCAGCGCAGAGTGCTTTCACCAGTTTGACGTAGTCTG
JMFN014N10+ CTGTAATCAAATTGACGTTGTGATCAGCGCAGAGTGCTTTCACCAGTTTGACGTAGTCTG
JMFN032A01+ CTGTAATCAAATTGACGTTGTGATCAGCGCAGAGTGCTTTCACCAGTTTGACGTAGTCTG
rJMFF017P06- CTGTAATCAAATTGACGTTGTGATCAGCGCAGAGTGCTTTCACCAGTTTGACGTAGTCTG
JMSF047M19+ CTGTAATCAAATTGACGTTGTGATCAGCGCAGAGTGCTTTCACCAGTTTGACGTAGTCTG
JMFF017P06+ CTGTAATCAAATTGACGTTGTGATCAGCGCAGAGTGCTTTCACCAGTTTGACGTAGTCTG
JMFN012E09+ CTGTAATCAAATTGACGTTGTGATCAGCGCAGAGTGCTTTCACCAGTTTGACGTAGTCTG
JMFN032B06+ CTGTAATCAAATTGACGTTGTGATCAGCGCAGAGTGCTTTCACCAGTTTGACGTAGTCTG
JMFN043L04+ CTGTAATCAAATTGACGTTGTGATCAGCGCAGAGTGCTTTCACCAGTTTGACGTAGTCTG
JMFF003J20+ GATCAGCGCAGAGTGNTTTCNCCAGTTNGNNGTAGTNTG
JMFF006A01+ CTGTAATCAAATTGACGTTGTGATCAGCGCAGAGTGCTTTCACCAGTTTGACGTAGTCTG
JMFN018K14+ CTGTAATCAAATTGACGTTGTGATCAGCGCAGAGTGCTTTCACCAGTTTGACGTAGTCTG
                      ____________________________________________________________
consensus CTGTAATCAAATTGACGTTGTGATCAGCGCAGAGTGCTTTCACCAGTTTGACGTAGTCTG
 
. : . : . : . : . : . :
rJMFF006A01- GTTGGTCACAATCCTCTGCCAGAACACAAAGTTGTGCTCCATGCTTCTCAATCACCTTAG
rJMFF003J20- GTTGGTCACAATCCTCTGCCAGAACACAAAGTTGTGCTCCATGCTTCTCAATCACCTTAG
rJMSF047M19- GTTGGTCACAATCCTCTGCCAGAACACAAAGTTGTGCTCCATGCTTCTCAATCACCTTAG
JMFN028B13+ GTTGGTCACAATCCTCTGCCAGAACACAAAGTTGTGCTCCATGCTTCTCAATCACCTTAG
JMFN014G06+ GTTGGTCACAATCCTCTGCCAGAACACAAAGTTGTGCTCCATGCTTCTCAATCACCTTAG
JMFN046G24+ GTTGGTCACAATCCTCTGCCAGAACACAAAGTTGTGCTCCATGCTTCTCAATCACCTTAG
JMFN039H14+ GTTGGTCACAATCCTCTGCCAGAACACAAAGTTGTGCTCCATGCTTCTCAATCACCTTAG
JMFN014N10+ GTTGGTCACAATCCTCTGCCAGAACACAAAGTTGTGCTCCATGCTTCTCAATCACCTTAG
JMFN032A01+ GTTGGTCACAATCCTCTGCCAGAACACAAAGTTGTGCTCCATGCTTCTCAATCACCTTAG
rJMFF017P06- GTTGGTCACAATCCTCTGCCAGAACACAAAGTTGTGCTCCATGCTTCTCAATCACCTTAG
JMSF047M19+ GTTGGTCACAATCCTCTGCCAGAACACAAAGTTGTGCTCCATGCTTCTCAATCACCTTAG
JMFF017P06+ GTTGGTCACAATCCTCTGCCAGAACACAAAGTTGTGCTCCATGCTTCTCAATCACCTTAG
JMFN012E09+ GTTGGTCACAATCCTCTGCCAGAACACAAAGTTGTGCTCCATGCTTCTCAATCACCTTAG
JMFN032B06+ GTTGGTCACAATCCTCTGCCAGAACACAAAGTTGTGCTCCATGCTTCTCAATCACCTTAG
JMFN043L04+ GTTGGTCACAATCCTCTGCCAGAACACAAAGTTGTGCTCCATGCTTCTCAATCACCTTAG
JMFF003J20+ GTTGGTCNCAATCCTCTGCCAGAACACAAAGTTGTGCTCCATGCTTNTCAATCACNTTAG
JMFF006A01+ GTTGGTCACAATCCTCTGCCAGAACACAAAGTTGTGCTCCATGCTTCTCAATCACCTTAG
JMFN018K14+ GTTGGTCACAATCCTCTGCCAGAACACAAAGTTGTGCTCCATGCTTCTCAATCACCTTAG
                      ____________________________________________________________
consensus GTTGGTCACAATCCTCTGCCAGAACACAAAGTTGTGCTCCATGCTTCTCAATCACCTTAG
 
. : . : . : . : . : . :
rJMFF006A01- CGCATTCATGAAGTCCACGAGCAAGCCCTCCGTGAGCCCTAGACTTCTTCAATACCAATT
rJMFF003J20- CGCATTCATGAAGTCCACGAGCAAGCCCTCCGTGAGCCCTAGACTTCTTCAATACCAATT
rJMSF047M19- CGCATTCATGAAGTCCACGAGCAAGCCCTCCGTGAGCCCTAGACTTCTTCAATACCAATT
JMFN028B13+ CGCATTCATGAAGTCCACGAGCAAGCCCTCCGTGAGCCCTAGACTTCTTCAATACCAATT
JMFN014G06+ CGCATTCATGAAGTCCACGAGCAAGCCCTCCGTGAGCCCTAGACTTCTTCAATACCAATT
JMFN046G24+ CGCATTCATGAAGTCCACGAGCAAGCCCTCCGTGAGCCCTAGACTTCTTCAATACCAATT
JMFN039H14+ CGCATTCATGAAGTCCACGAGCAAGCCCTCCGTGAGCCCTAGACTTCTTCAATACCAATT
JMFN014N10+ CGCATTCATGAAGTCCACGAGCAAGCCCTCCGTGAGCCCTAGACTTCTTCAATACCAATT
JMFN032A01+ CGCATTCATGAAGTCCACGAGCAAGCCCTCCGTGAGCCCTAGACTTCTTCAATACCAATT
rJMFF017P06- CGCATTCATGAAGTCCACGAGCAAGCCCTCCGTGAGCCCTAGACTTCTTCAATACCAATT
JMSF047M19+ CGCATTCATGAAGTCCACGAGCAAGCCCTCCGTGAGCCCTAGACTTCTTCAATACCAATT
JMFF017P06+ CGCATTCATGAAGTCCACGAGCAAGCCCTCCGTGAGCCCTAGACTTCTTCAATACCAATT
JMFN012E09+ CGCATTCATGAAGTCCACGAGCAAGCCCTCCGTGAGCCCTAGACTTCTTCAATACCAATT
JMFN032B06+ CGCATTCATGAAGTCCACGAGCAAGCCCTCCGTGAGCCCTAGACTTCTTCAATACCAATT
JMFN043L04+ CGCATTCATGAAGTCCACGAGCAAGCCCTCCGTGAGCCCTAGACTTCTTCAATACCAATT
JMFF003J20+ CGCATTCATGAAGTCCACGAGCAAGCCCTCCGTGAGCCCTAGACTTCTTCAATACCAATT
JMFF006A01+ CGCATTCATGAAGTCCACGAGCAAGCCCTCCGTGAGCCCTAGACTTCTTCAATACCAATT
JMFN018K14+ CGCATTCATGAAGTCCACGAGCAAGCCCTCCGTGAGCCCTAGACTTCTTCAATACCAATT
                      ____________________________________________________________
consensus CGCATTCATGAAGTCCACGAGCAAGCCCTCCGTGAGCCCTAGACTTCTTCAATACCAATT
 
. : . : . : . : . : . :
rJMFF006A01- GCAAAGCAGTCATCAAGTCCATTGGCTCCCCAAGGGCTGGGGCAGGGGCAGGAGTTTCCG
rJMFF003J20- GCAAAGCAGTCATCAAGTCCATTGGCTCCCCAAGGGCTGGGGCAGGGGCAGGAGTTTCCG
rJMSF047M19- GCAAAGCAGTCATCAAGTCCATTGGCTCCCCAAGGGCTGGGGCAGGGGCAGGAGTTTCCG
JMFN028B13+ GCAAAGCAGTCATCAAGTCCATTGGCTCCCCAAGGGCTGGGGCAGGGGCAGGAGTTTCCG
JMFN014G06+ GCAAAGCAGTCATCAAGTCCATTGGCTCCCCAAGGGCTGGGGCAGGGGCAGGAGTTTCCG
JMFN046G24+ GCAAAGCAGTCATCAAGTCCATTGGCTCCCCAAGGGCTGGGGCAGGGGCAGGAGTTTCCG
JMFN039H14+ GCAAAGCAGTCATCAAGTCCATTGGCTCCCCAAGGGCTGGGGCAGGGGCAGGAGTTTCCG
JMFN014N10+ GCAAAGCAGTCATCAAGTCCATTGGCTCCCCAAGGGCTGGGGCAGGGGCAGGAGTTTCCG
JMFN032A01+ GCAAAGCAGTCATCAAGTCCATTGGCTCCCCAAGGGCTGGGGCAGGGGCAGGAGTTTCCG
rJMFF017P06- GCAAAGCAGTCATCAAGTCCATTGGCTCCCCAAGGGCTGGGGCAGGGGCAGGAGTTTCCG
JMSF047M19+ GCAAAGCAGTCATCAAGTCCATTGGCTCCCCAAGGGCTGGGGCAGGGGCAGGAGTTTCCG
JMFF017P06+ GCAAAGCAGTCATCAAGTCCATTGGCTCCCCAAGGGCTGGGGCAGGGGCAGGAGTTTCCG
JMFN012E09+ GCAAAGCAGTCATCAAGTCCATTGGCTCCCCAAGGGCTGGGGCAGGGGCAGGAGTTTCCG
JMFN032B06+ GCAAAGCAGTCATCAAGTCCATTGGCTCCCCAAGGGCTGGGGCAGGGGCAGGAGTTTCCG
JMFN043L04+ GCAAAGCAGTCATCAAGTCCATTGGCTCCCCAAGGGCTGGGGCAGGGGCAGGAGTTTCCG
JMFF003J20+ GCAAAGCAGTCATCAAGTCCATTGGCTCCCCAAGGGCTGGGGCAGGGGCAGGAGTTTCCG
JMFF006A01+ GCAAAGCAGTCATCAAGTCCATTGGCTCCCCAAGGGCTGGGGCAGGGGCAGGAGTTTCCG
JMFN018K14+ GCAAAGCAGTCATCAAGTCCATTGGCTCCCCAAGGGCTGGGGCAGGGGCAGGAGTTTCCG
                      ____________________________________________________________
consensus GCAAAGCAGTCATCAAGTCCATTGGCTCCCCAAGGGCTGGGGCAGGGGCAGGAGTTTCCG
 
. : . : . : . : . : . :
rJMFF006A01- CAACAACAACATCCTCTCCAGACATTTTCTTCAGCTAGATGTCCAACTCAAACCACTCCT
rJMFF003J20- CAACAACAACATCCTCTCCAGACATTTTCTTCAGCTAGATGTCCAACTCAAACCACTCCT
rJMSF047M19- CAACAACAACATCCTCTCCAGACATTTTCTTCAGCTAGATGTCCAACTCAAACCACTCCT
JMFN028B13+ CAACAACAACATCCTCTCCAGACATTTTCTTCAGCTAGATGTCCAACTCAAACCACTCCT
JMFN014G06+ CAACAACAACATCCTCTCCAGACATTTTCTTCAGCTAGATGTCCAACTCAAACCACTCCT
JMFN046G24+ CAACAACAACATCCTCTCCAGACATTTTCTTCAGCTAGATGTCCAACTCAAACCACTCCT
JMFN039H14+ CAACAACAACATCCTCTCCAGACATTTTCTTCAGCTAGATGTCCAACTCAAACCACTCCT
JMFN014N10+ CAACAACAACATCCTCTCCAGACATTTTCTTCAGCTAGATGTCCAACTCAAACCACTCCT
JMFN032A01+ CAACAACAACATCCTCTCCAGACATTTTCTTCAGCTAGATGTCCAACTCAAACCACTCCT
rJMFF017P06- CAACAACAACATCCTCTCCAGACATTTTCTTCAGCTAGATGTCCAACTCAAACCACTCCT
JMSF047M19+ CAACAACAACATCCTCTCCAGACATTTTCTTCAGCTAGATGTCCAACTCAAACCACTCCT
JMFF017P06+ CAACAACAACATCCTCTCCAGACATTTTCTTCAGCTAGATGTCCAACTCAAACCACTCCT
JMFN012E09+ CAACAACAAAATCCTCTCCAGACATTTTCTTCAGCTAGATGTCCAACTCAAACCACTCCT
JMFN032B06+ CAACAACAACATCCTCTCCAGACATTTTCTTCAGCTAGATGTCCAACTCAAACCACTCCT
JMFN043L04+ CAACAACAACATCCTCTCCAGACATTTTCTTCAGCTAGATGTCCAACTCAAACCACTCCT
JMFF003J20+ CAACAACAACATCCTCTCCAGACATTTTCTTCAGCTAGATGTCCAACTCAAACCACTCCT
JMFF006A01+ CAACAACAACATCCTCTCCAGACATTTTCTTCAGCTAGATGTCCAACTCAAACCACTCCT
JMFN018K14+ CAACAACAACATCCTCTCCAGACATTTTCTTCAGCTAGATGTCCAACTCAAACCACTCCT
                      ____________________________________________________________
consensus CAACAACAACATCCTCTCCAGACATTTTCTTCAGCTAGATGTCCAACTCAAACCACTCCT
 
. : . : . : . : . : . :
rJMFF006A01- ACAG
rJMFF003J20- ACAGGCCT
rJMSF047M19- ACAGGCCTTGAAGTGAAGAGTAAAGTGCAGAGAACTCTAAGC
JMFN028B13+ ACAGGCCTT
JMFN014G06+ ACAGGCCTTGAAGTGAAGAGTAAAGTGCA
JMFN046G24+ ACAGGCCTTGAAGTGAAGAGTAAAGTGCAGAGAA
JMFN039H14+ ACAGGCCTTGAAGTGAAGAGTAAAGTGCAGAGAAC
JMFN014N10+ ACAGGCCTT
JMFN032A01+ ACAGGCCTTGAAGTGAAGAGTAAAGT
rJMFF017P06- ACAGGCCTTGAAGTGAAGAGTAAAGTGCAGAGAACTCTAAGCCGTTT
JMSF047M19+ ACAGGCCTTGAAGTGAAGAGTAAAGTGCAGAGAACTCTAAGCCGTTTCGC
JMFF017P06+ ACAGGCCTTGAAGTGAAGAGTAAAGTGCAGAGAACTCTAAGCCGTTTCGCGAGGG
JMFN012E09+ ACAGGCCTTGAAGTGAAGAGTAAAGTGCAGAGAACTCTAAGCCGTTTCGCGAGGGAGAAG
JMFN032B06+ ACAGGCCTTGAAGTGAAGAGTAAAGTGCAGAGAACTCTAAGCCGTTTCGCGAGGGAGAAG
JMFN043L04+ ACAGGCCTTGAAGTGAAGAGTAAAGTGCAGAGAACTCTAAGCCGTTTCGCGAGGGAGAAG
JMFF003J20+ ACAGGCCTTGAAGTGAAGAGTAAAGTGCAGAGAACTCTAAGCCGTTTCGC
JMFF006A01+ ACAGGCCTTGAAGTGAAGAGTAAAGTGCAGAGAACTCTAAGCCGTTTCGCGAGGGAGAAG
JMFN018K14+ ACAGGCCTTGAAGTGAAGAGTAAAGTGCAGAGAACTCTAAGCCGTTTCGCGAGGGAGAAG
                      ____________________________________________________________
consensus ACAGGCCTTGAAGTGAAGAGTAAAGTGCAGAGAACTCTAAGCCGTTTCGCGAGGGAGAAG
 
. : . : . : . : . : . :
JMFN012E09+ AGGAAGAA
JMFN032B06+ AGGAAGAAGATGAGCTTCTGAGAGCTTTATATGAGACGCTCTAAGTTAAACCCTAAACTA
JMFN043L04+ AGGAAGAAGATGAGCTTCTGAGAGCTTTATATGAGACGCTCTAAGTTAAACCCTAAACTA
JMFN018K14+ AGGAAGAAGATGAGCTTCTGAGAGCTTTATATGAGACGCTCTAAGTTAAACCCTAAACTA
                      ____________________________________________________________
consensus AGGAAGAAGATGAGCTTCTGAGAGCTTTATATGAGACGCTCTAAGTTAAACCCTAAACTA