Contig 000337:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF016E16Sequence539010646 (4)gb|AAV88074.1|2e-41sucrose transporter-like protein [Ipomoea batatas]744000337 (5)gb|EYU28727.1|1e-77hypothetical protein MIMGU_mgv1a006020mg [Erythranthe guttata]
JMFF024L17Sequence547010646 (4)gb|AAV88074.1|1e-40sucrose transporter-like protein [Ipomoea batatas]231000337 (5)
JMFF046N22Sequence475010646 (4)gb|AAV88074.1|2e-42sucrose transporter-like protein [Ipomoea batatas]395000337 (5)
JMFN017O14Sequence584000337 (5)ref|XP_010256873.1|9e-32PREDICTED: sucrose transport protein SUC3 isoform X3 [Nelumbo nucifera]
JMSF016P16Sequence460010646 (4)gb|AAV88074.1|4e-19sucrose transporter-like protein [Ipomoea batatas]781000337 (5)ref|XP_010256873.1|6e-74PREDICTED: sucrose transport protein SUC3 isoform X3 [Nelumbo nucifera]

Alignment

This contig is upended


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rJMFF016E16+                                                                     T
                      ____________________________________________________________
consensus                                                                        T
 
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rJMFF016E16+          TTATTGATCCGTTGTGCCAGATGATTGGTGCTAGACTGGTTTGGGCTGTGAGCAATTTTA
rJMSF016P16+                    GTTGTGCCAGATGATTGGTGCTAGACTGGTTTGGGCTGTGAGCCATTTTA
                      ____________________________________________________________
consensus             TTATTGATCCGTTGTGCCAGATGATTGGTGCTAGACTGGTTTGGGCTGTGAGCCATTTTA
 
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rJMFF016E16+          TGGTGCTTATGTGCATGGCAGGGACTACTGTTATTAGCTATGTTTCTCTTAATGAATCGT
rJMSF016P16+          TGGTGCTTATGTGCATGGCAGGGACTACTGTTATTAGCTATGTTTCTCTTAATGAATCGT
                      ____________________________________________________________
consensus             TGGTGCTTATGTGCATGGCAGGGACTACTGTTATTAGCTATGTTTCTCTTAATGAATCGT
 
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rJMFF016E16+          CACAGGGAGTTCAACATGTTATTGGGGCGAGTGAATCAACTAAAGTTGCCTCGTTGATTG
rJMSF016P16+          CACAGGGAGTTCAACATGTTATTGGGGCGAGTGAATCAACTAAAGTTGCCTCGTTGATTG
                      ____________________________________________________________
consensus             CACAGGGAGTTCAACATGTTATTGGGGCGAGTGAATCAACTAAAGTTGCCTCGTTGATTG
 
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rJMFF016E16+          TTTTTGCTCTTCTCGGCATTCCCCTTGCTATCACTTACAGTGTCCCTTTCTCCGTTACGG
rJMSF016P16+          TTTTTGCTCTTCTCGGCATTCCCCTTGCTATCACTTACAGTGTCCCTTTCTCCGTTACGG
                      ____________________________________________________________
consensus             TTTTTGCTCTTCTCGGCATTCCCCTTGCTATCACTTACAGTGTCCCTTTCTCCGTTACGG
 
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rJMFF016E16+          CAGATTTGACTGCTGATGCTGGCGGTGGACAAGGTTTGGCCATAGGAGTTCTCAACCTCG
rJMSF016P16+          CAGATTTGACTGCTGATGCTGGCGGTGGACAAGGTTTGGCCATAGGAGTTCTCAACCTCG
JMFN017O14+                           TGCTGGCGGTGGACAAGGTTTGGCCATAGGAGTTCTCAACCTCG
                      ____________________________________________________________
consensus             CAGATTTGACTGCTGATGCTGGCGGTGGACAAGGTTTGGCCATAGGAGTTCTCAACCTCG
 
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rJMFF016E16+          CCATCGTTGTACCACAGATGGTTATCTCACTTGGTGCGGGTCCATGGGACGCCTTATTTG
rJMSF016P16+          CCATCGTTGTACCACAGATGGTTATCTCACTTGGTGCGGGTCCATGGGACGCCTTATTTG
JMFN017O14+           CCATCGTTGTACCACAGATGGTTATCTCACTTGGTGCGGGTCCATGGGACGCCTTATTTG
                      ____________________________________________________________
consensus             CCATCGTTGTACCACAGATGGTTATCTCACTTGGTGCGGGTCCATGGGACGCCTTATTTG
 
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rJMFF016E16+          GCGGAGGGAACATACCCGCGTTTGCCCTGGCCTCTATATTCGCACTTGGGGCTGGTGTCA
rJMSF016P16+          GCGGAGGGAACATACCCGCGTTTGCCCTGGCCTCTATATTCGCACTTGGGGCTGGTGTCA
JMFN017O14+           GCGGAGGGAACATACCCGCGTTTGCCCTGGCCTCTATATTCGCACTTGGGGCTGGTGTCA
                      ____________________________________________________________
consensus             GCGGAGGGAACATACCCGCGTTTGCCCTGGCCTCTATATTCGCACTTGGGGCTGGTGTCA
 
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rJMFF016E16+          TTGCTACACTCAAACTGCCTACTCTCTCGAGAAACGCGTTTAGATCAACCGGCCTTCATT
rJMSF016P16+          TTGCTACACTCAAACTGCCTACTCTCTCGAGAAACGCGTTTAGATCAACCGGCCTTCATT
rJMFF046N22+               ACACTCAAACTGCCTACTCTCTCGAGAAACGCGTTTAGATCAACCGGCCTTCATT
rJMFF024L17+                                      GAGAAACGCGTTTAGATCANCCGGCNTNCATN
JMFN017O14+           TTGCTACACTCAAACTGCCTACTCTCTCGAGAAACGCGTTTAGATCAACCGGCCTTCATT
                      ____________________________________________________________
consensus             TTGCTACACTCAAACTGCCTACTCTCTCGAGAAACGCGTTTAGATCAACCGGCCTTCATT
 
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rJMFF016E16+          TTTGATAACCGATGAACCAAGAAAGCTTGCAATCCATAATGGTCCGTGCACTCCCACAAT
rJMSF016P16+          TTTGATAACCGATGAACCAAGAAAGCTTGCAATCCATAATGGTCCGTGCACTCCCACAAT
rJMFF046N22+          TTTGATAACCGATGAACCAAGAAAGCTTGCAATCCATAATGGTCCGTGCACTCCCACAAT
rJMFF024L17+          TTTGATAACCGATGAACCAAGAAAGCTNGCAATCCATAATGGTCCGTGCACTCCCACAAN
JMFN017O14+           TTTGATAACCGATGAACCAAGAAAGCTTGCAATCCATAATGGTCCGTGCACTCCCACAAT
                      ____________________________________________________________
consensus             TTTGATAACCGATGAACCAAGAAAGCTTGCAATCCATAATGGTCCGTGCACTCCCACAAT
 
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rJMFF016E16+          CAATTCATTTTTTTTTCTCACAATTTTGGCAAGGGAACGACGTTCGAGGTGTAGAATATA
rJMSF016P16+          CAATTCATTTTTTTTTCTCACAATTTTGGCAAGGGAACGACGTTCGAGGTGTAGAATATA
rJMFF046N22+          CAATTCAT-TTTTTTTCTCACAATTTTGGCAAGGGAACGACGTTCGAGGTGTAGAATATA
rJMFF024L17+          CAATTCATNTTTTTTTCTCACAANNNTGGCAAGGNAACGACGTTCGAGGNGTAGAATATA
JMFN017O14+           CAATTCATTTTTTTTTCTCACAATTTTGGCAAGGGAACGACGTTCGAGGTGTAGAATATA
                      ____________________________________________________________
consensus             CAATTCATTTTTTTTTCTCACAATTTTGGCAAGGGAACGACGTTCGAGGTGTAGAATATA
 
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rJMFF016E16+          TAATTACATTACAATTCATATAATGAAATACATGTAGTGACAGGATATTAGCTAGGTGCT
rJMSF016P16+          TAATTACATTACAATTCATATAATGAAATACATGTAGTGACAGGATATTAGCTAGGTGCT
rJMFF046N22+          TAATTACATTACAATTCATATAATGAAATACATGTAGTGACAGGATATTAGCTAGGTGCT
rJMFF024L17+          TAATTACATNACAANTCATATAATGAAATACATNTAGTGACAGNATATTAGCTAGGTGCT
JMFN017O14+           TAATTACATTACAATTCATATAATGAAATACATGTAGTGACAGGATATTAGCTAGGTGCT
                      ____________________________________________________________
consensus             TAATTACATTACAATTCATATAATGAAATACATGTAGTGACAGGATATTAGCTAGGTGCT
 
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rJMFF016E16+          CTTTACAATTCTTTGTATGTGATCCATTAGTAGATATAGATGATCTGTTGTAAAAGGGCA
rJMSF016P16+          CTTTACAATTCTTTGTATGTGATCCATTAGTAGATATAGATGATCTGTTGTAAAAGGGCA
rJMFF046N22+          CTTTACAATTCTTTGTATGTGATCCATTAGTAGATATAGATGATCTGTTGTAAAAGGGCA
rJMFF024L17+          NTTTACAA                                                    
JMFN017O14+           CTTTACAATTCTTTGTATGTGATCCATTAGTAGATATAGATGATCTGTTGTAAAAGGGCA
                      ____________________________________________________________
consensus             CTTTACAATTCTTTGTATGTGATCCATTAGTAGATATAGATGATCTGTTGTAAAAGGGCA
 
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rJMFF016E16+          AACTCTTTGGTCTGCCCACACTA                                     
rJMSF016P16+          AACTCTTTGGTCTGCCCACACTATGTCTATAGACTATACTTGTATCATCTTTCACAATGC
rJMFF046N22+          AACTCTTTGGTCTGCCCACACTATGTCTATAGACTATACTTGTATCATCTTTCACAATGC
JMFN017O14+           AACTCTTTGGTCTGCCCACACTATGTCTATAGACTATACTTGTATCATCTTTCACAATGC
                      ____________________________________________________________
consensus             AACTCTTTGGTCTGCCCACACTATGTCTATAGACTATACTTGTATCATCTTTCACAATGC
 
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rJMSF016P16+          ATACTATCACT                                                 
rJMFF046N22+          ATACTATCACTATACTTCTGTTT                                     
JMFN017O14+           ATACTATCACTATACTTCTGTTTXXXXXXXXXXXXXXXXXXXXXCTCGAGACTAGTTCTC
                      ____________________________________________________________
consensus             ATACTATCACTATACTTCTGTTTNNNNNNNNNNNNNNNNNNNNNCTCGAGACTAGTTCTC