Contig 000317:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN011G15Sequence604000317 (2)ref|XP_009794349.1|110PREDICTED: uncharacterized protein LOC104241132 [Nicotiana sylvestris] ref|XP_00
JMFN025B23Sequence601000317 (2)ref|XP_009794349.1|108PREDICTED: uncharacterized protein LOC104241132 [Nicotiana sylvestris] ref|XP_00

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN025B23+ A
JMFN011G15+ GGGA
                      ____________________________________________________________
consensus GGGA
 
. : . : . : . : . : . :
JMFN025B23+ GGGAGTTGTCGAGCTTCCACATCGCCGCCTTCCCCTACCATTCTTGCCGGCTTTTCTCTG
JMFN011G15+ GGGAGTTGTCGAGCTTCCACATCGCCGCCTTCCCCTACCATTCTTGCCGGCTTTTCTCTG
                      ____________________________________________________________
consensus GGGAGTTGTCGAGCTTCCACATCGCCGCCTTCCCCTACCATTCTTGCCGGCTTTTCTCTG
 
. : . : . : . : . : . :
JMFN025B23+ TGACATTCTTGATTGCCAAGAGGAACCCGTGGTTTTCAGTAGCTCTTCGAATGTCAGAAT
JMFN011G15+ TGACATTCTTGATTGCCAAGAGGAACCCGTGGTTTTCAGTAGCTCTTCGAATGTCAGAAT
                      ____________________________________________________________
consensus TGACATTCTTGATTGCCAAGAGGAACCCGTGGTTTTCAGTAGCTCTTCGAATGTCAGAAT
 
. : . : . : . : . : . :
JMFN025B23+ GTCCTCGCTCACCTCGTGCCTAGAGAGGGAGACCAGACTCGGGAGAACGTCCCTTTGGAA
JMFN011G15+ GTCCTCGCTCACCTCGTGCCTAGAGAGGGAGACCAGACTCGGGAGAACGTTCCTTTGGAA
                      ____________________________________________________________
consensus GTCCTCGCTCACCTCGTGCCTAGAGAGGGAGACCAGACTCGGGAGAACGTTCCTTTGGAA
 
. : . : . : . : . : . :
JMFN025B23+ GTCTCGTCTCTGCCTGCCTCTCCTTGCTTGCCCTCTCCGAGGGCGTTTTGGTGTTGTGGC
JMFN011G15+ GTCTCGTCTCTGCCTGCCTCTCCTTGCTTGCCCTCTCCGAGGGCGTTTTGGTGTTGTGGC
                      ____________________________________________________________
consensus GTCTCGTCTCTGCCTGCCTCTCCTTGCTTGCCCTCTCCGAGGGCGTTTTGGTGTTGTGGC
 
. : . : . : . : . : . :
JMFN025B23+ AGCTCCTGATTCTTCTTCTTCGTCGTAGTTGATTTCCAAAATCGATGGCTCGTAACAGCT
JMFN011G15+ AGCTCCTGATTCTTCTTCTTCGTCGTAGTTGATTTCCAAAATCGATGGCTCGTAACAGCT
                      ____________________________________________________________
consensus AGCTCCTGATTCTTCTTCTTCGTCGTAGTTGATTTCCAAAATCGATGGCTCGTAACAGCT
 
. : . : . : . : . : . :
JMFN025B23+ GCCTTCTTCCTTCATGTCTCTCAACTCGAGCGTCATAGCCTCGAAATAATCCAAGCCATC
JMFN011G15+ GCCTTCTTCCTTCATGTCTCTCAACTCGAGCGTCATAGCCTCGAAATAATCCAAGCCATC
                      ____________________________________________________________
consensus GCCTTCTTCCTTCATGTCTCTCAACTCGAGCGTCATAGCCTCGAAATAATCCAAGCCATC
 
. : . : . : . : . : . :
JMFN025B23+ GGGGATGGATTCTTCAACGGGTTCGCCTTTTCCCGACGAAGCATCCGTGATATTGCGCTC
JMFN011G15+ GGGGATGGATTCTTCAACGGGTTCGCCTTTTCCCGACGAAGCATCCGTGATATTGCGCTC
                      ____________________________________________________________
consensus GGGGATGGATTCTTCAACGGGTTCGCCTTTTCCCGACGAAGCATCCGTGATATTGCGCTC
 
. : . : . : . : . : . :
JMFN025B23+ ACGACCATCGTTAACTCGAGAATAAATCACGTCCGCTAACCATTTGAGGCAATCGCTAGA
JMFN011G15+ ACGACCATCGTTAACTCGAGAATAAATCACGTCCGCTAACCATTTGAGGCAATCGCTAGA
                      ____________________________________________________________
consensus ACGACCATCGTTAACTCGAGAATAAATCACGTCCGCTAACCATTTGAGGCAATCGCTAGA
 
. : . : . : . : . : . :
JMFN025B23+ TGCAGTTTCGTTCGGCAGATTGTTAGCACTCGACGATGAGATGGAGACTATAGCCTCGGC
JMFN011G15+ TGCAGTTTCGTTCGGCAGATTGTTAGCACTCGACGATGAGATGGAGACTATAGCCTCGGC
                      ____________________________________________________________
consensus TGCAGTTTCGTTCGGCAGATTGTTAGCACTCGACGATGAGATGGAGACTATAGCCTCGGC
 
. : . : . : . : . : . :
JMFN025B23+ AGCTCCCCTCGTGACTTCTTCAAGAGGTTGCGTAGATTTCTCGACTCTCAACTCAACACT
JMFN011G15+ AGCTCCCCTCGTGACTTCTTCAAGAGGTTGCGTAGATTTCTCGACTCTCAACTCAACACT
                      ____________________________________________________________
consensus AGCTCCCCTCGTGACTTCTTCAAGAGGTTGCGTAGATTTCTCGACTCTCAACTCAACACT