Contig 000316:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN011E19Sequence561000316 (2)gb|AAK21248.1|AF335235_18e-39MADS-box transcription factor FBP5 [Petunia x hybrida]
JMFN014E09Sequence495000316 (2)gb|AAK21248.1|AF335235_14e-24MADS-box transcription factor FBP5 [Petunia x hybrida]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN014E09+ AATCCTTTAAAGTGCAGCATATATATAT
                      ____________________________________________________________
consensus AATCCTTTAAAGTGCAGCATATATATAT
 
. : . : . : . : . : . :
JMFN014E09+ CAAACATAATTACTAGTCTGTTTCATACTACCAATATATATTTAAAAGTAGTGTTCCAAA
JMFN011E19+ ATTTAAAAGTAGTGTTCCAAA
                      ____________________________________________________________
consensus CAAACATAATTACTAGTCTGTTTCATACTACCAATATATATTTAAAAGTAGTGTTCCAAA
 
. : . : . : . : . : . :
JMFN014E09+ TATATATATATAAAAGTTGAGAAACAGTCTTCCAAGATTGAAGTCAGTGCAGCATGCATT
JMFN011E19+ TATATATATATAAAAGTTGAGAAACAGTCTTCCAAGATTGAAGTCAGTGCAGCATGCATT
                      ____________________________________________________________
consensus TATATATATATAAAAGTTGAGAAACAGTCTTCCAAGATTGAAGTCAGTGCAGCATGCATT
 
. : . : . : . : . : . :
JMFN014E09+ TGCTTATTATTGTTGAGATTTATACACAGTACTGGGGAATTGAAGAAAGTGTTTATATGT
JMFN011E19+ TGCTTATTATTGTTGAGATTTATACACAGTACTGGGGAATTGAAGAAAGTGTTTATATGT
                      ____________________________________________________________
consensus TGCTTATTATTGTTGAGATTTATACACAGTACTGGGGAATTGAAGAAAGTGTTTATATGT
 
. : . : . : . : . : . :
JMFN014E09+ CATCCCTTCTGAAAACCATAGAACAATCTGCAGATCAGATCAAAGCATCCAACCAGGGAG
JMFN011E19+ CATCCCTTCTGAAAACCATAGAACAATCTGCAGATCAGATCAAAGCATCCAACCAGGGAG
                      ____________________________________________________________
consensus CATCCCTTCTGAAAACCATAGAACAATCTGCAGATCAGATCAAAGCATCCAACCAGGGAG
 
. : . : . : . : . : . :
JMFN014E09+ CACAGCATTCACATTCTGTGCATTAGTGGCTGCTGTTATTTGGCTTGAAGTTGCCACCGG
JMFN011E19+ CACAGCATTCACATTCTGTGCATTAGTGGCTGCTGTTATTTGGCTTGAAGTTGCCACCGG
                      ____________________________________________________________
consensus CACAGCATTCACATTCTGTGCATTAGTGGCTGCTGTTATTTGGCTTGAAGTTGCCACCGG
 
. : . : . : . : . : . :
JMFN014E09+ GTTAAACCCGATATGCAAAGTGGAATCACACTCCAAGGGCTGGAAGAAACCATGAGTCTG
JMFN011E19+ GTTAAACCCGATATGCAAAGTGGAATCACACTCCAAGGGCTGGAAGAAACCATGAGTCTG
                      ____________________________________________________________
consensus GTTAAACCCGATATGCAAAGTGGAATCACACTCCAAGGGCTGGAAGAAACCATGAGTCTG
 
. : . : . : . : . : . :
JMFN014E09+ GTCAGCATGCTGCTGGCTGTATGCACCACTTTGCTCTCCAGGCCCCCATGGCTGTTGAAG
JMFN011E19+ GTCAGCATGCTGCTGGCTGTATGCACCACTTTGCTCTCCAGGCCCCCATGGCTGTTGAAG
                      ____________________________________________________________
consensus GTCAGCATGCTGCTGGCTGTATGCACCACTTTGCTCTCCAGGCCCCCATGGCTGTTGAAG
 
. : . : . : . : . : . :
JMFN014E09+ GTTATTGTCTACATAAAATTCTTCAAGCTTTGATTCAAGGGTTTTAT
JMFN011E19+ GTTATTGTCTACATAAAATTCTTCAAGCTTTGATTCAAGGGTTTTATTAGCCTCCAACCA
                      ____________________________________________________________
consensus GTTATTGTCTACATAAAATTCTTCAAGCTTTGATTCAAGGGTTTTATTAGCCTCCAACCA
 
. : . : . : . : . : . :
JMFN011E19+ CAGCTTCTCCTTTGTTTGAAGATCAGATAGCTGATCAAGCACCATCTGTGTCATTATGCC
                      ____________________________________________________________
consensus CAGCTTCTCCTTTGTTTGAAGATCAGATAGCTGATCAAGCACCATCTGTGTCATTATGCC
 
. : . : . : . : . : . :
JMFN011E19+ AAAGCTATATATAAACTCATATCAATCAAATATAAGCCATGATTCATGGATTAACTTGAC
                      ____________________________________________________________
consensus AAAGCTATATATAAACTCATATCAATCAAATATAAGCCATGATTCATGGATTAACTTGAC