Contig 000309:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF019I02-                                ATATATCACGAGTACAACATATTTATACAATCACACCA
                      ____________________________________________________________
consensus                                   ATATATCACGAGTACAACATATTTATACAATCACACCA
 
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rJMSF019I02-          TATGTACCGCAAAAGAACATCCTATTTTTTCTCAAAGAAGAAATAAAATTAAAAAAATAA
                      ____________________________________________________________
consensus             TATGTACCGCAAAAGAACATCCTATTTTTTCTCAAAGAAGAAATAAAATTAAAAAAATAA
 
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rJMSF019I02-          TAATAATAATAAAATAAGCTTAGTTTTAACTCTACACAGCCTTGCTACAATCGGCTTTTC
                      ____________________________________________________________
consensus             TAATAATAATAAAATAAGCTTAGTTTTAACTCTACACAGCCTTGCTACAATCGGCTTTTC
 
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rJMSF019I02-          CGAAGCCAATTCTGCGTCTGATCAAGTCAAACTCCACCCAGAGATTTTGCTGATGGAAGT
                      ____________________________________________________________
consensus             CGAAGCCAATTCTGCGTCTGATCAAGTCAAACTCCACCCAGAGATTTTGCTGATGGAAGT
 
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rJMSF019I02-          TTCCGATGATGTTGCTCGCCACTCCGAGCGATTCCGACCGTCCGATGCCCAGACAATGGA
JMFN006P15+                                             CGACCGTCCGATGCCCAGACAATGGA
                      ____________________________________________________________
consensus             TTCCGATGATGTTGCTCGCCACTCCGAGCGATTCCGACCGTCCGATGCCCAGACAATGGA
 
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rJMSF019I02-          CCCCACCTTCGACGTTGTCGGATATCCTGTCTCTGTTGACCACGAGGTCCACCCTGTTTT
JMFN006P15+           CCCCACCTTCGACGTTGTCGGATATCCTGTCTCTGTTGACCACGAGGTCCACCCTGTTTT
                      ____________________________________________________________
consensus             CCCCACCTTCGACGTTGTCGGATATCCTGTCTCTGTTGACCACGAGGTCCACCCTGTTTT
 
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rJMSF019I02-          CGAATTCGAAAGCCATGTCGCCTATCAGCCGTCCGATCTCCGTCGGGTTGCCGTCGAAGC
JMFF042D22+                                                         GTTGCCGTCGAAGC
JMFN006P15+           CGAATTCGAAAGCCATGTCGCCTATCAGCCGTCCGATCTCCGTCGGGTTGCCGTCGAAGC
                      ____________________________________________________________
consensus             CGAATTCGAAAGCCATGTCGCCTATCAGCCGTCCGATCTCCGTCGGGTTGCCGTCGAAGC
 
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rJMSF019I02-          ACATGTCCAGGGCTCCGGCGTAGACGCAGTCCTTCTTCAGTTTGGAGCCGGCGAGGCGGA
JMFF042D22+           ACATGTCCAGGGCTCCGGCGTAGACGTAGTCCTTCTTCAGTTTGGAGCCGGCGAGGCGGA
JMFN006P15+           ACATGTCCAGGGCTCCGGCGTAGACGTAGTCCTTCTTCAGTTTGGAGCCGGCGAGGCGGA
                      ____________________________________________________________
consensus             ACATGTCCAGGGCTCCGGCGTAGACGTAGTCCTTCTTCAGTTTGGAGCCGGCGAGGCGGA
 
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rJMSF019I02-          CGACTTCTTCCCGGACCTTGTTGTACGCCTCGTCCACTAGGAACGTGTACTGCGTGCCGG
JMFF042D22+           CGACTTCTTCCCGGACCTTGTTGTACGCCTCGTCCACTAGGAACGTGTACTGCGTGCCGG
JMFN006P15+           CGACTTCTTCCCGGACCTTGTTGTACGCCTCGTCCACTAGGAACGTGTACTGCGTGCCGG
                      ____________________________________________________________
consensus             CGACTTCTTCCCGGACCTTGTTGTACGCCTCGTCCACTAGGAACGTGTACTGCGTGCCGG
 
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rJMSF019I02-          AATCGATAATGGTCTGGCCGGACCCGCCGGCGTCCGGCCGGAAAACGGCCGCCGAGATGT
JMFF042D22+           AATCGATAATGGTCTGGCCGGACCCGCCGGCGTCCGGCCGGAAAACGGCCGCCGAGATGT
JMFN006P15+           AATCGATAATGGTCTGGCCGGACCCGCCGGCGTCCGGCCGGAAAACGGCCGCCGAGATGT
                      ____________________________________________________________
consensus             AATCGATAATGGTCTGGCCGGACCCGCCGGCGTCCGGCCGGAAAACGGCCGCCGAGATGT
 
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rJMSF019I02-          TGAGTTTTTTCCCGCCAATTTTGATCCCGGTGAACCCGACGGTGTAGGCTAGGGGGTCGA
JMFF042D22+           TGAGTTTTTTCCCGCCAATTTTGATCCCGGTGAACCCGACGGTGTAGGCTAGGGGGTCGA
JMFN006P15+           TGAGTTTTTTCCCGCCAATTTTGATCCCGGTGAACCCGACGGTGTAGGCTAGGGGGTCGA
                      ____________________________________________________________
consensus             TGAGTTTTTTCCCGCCAATTTTGATCCCGGTGAACCCGACGGTGTAGGCTAGGGGGTCGA
 
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rJMSF019I02-          GGTTGGGGGAGCGGCGTTGGGTTAGGGAGAAAGTGAGGAGATTGATGTATTGGAAGGTGG
JMFF042D22+           GGTTGGGGGAGCGGCGTTGGGTTAGGGAGAAAGTGAGGAGATTGATGTATTGGAAGGTGG
JMFN006P15+           GGTTGGGGGAGCGGCGTTGGGTTAGGGAGAAAGTGAGGAGATTGATGTATTGGAAGGTGG
                      ____________________________________________________________
consensus             GGTTGGGGGAGCGGCGTTGGGTTAGGGAGAAAGTGAGGAGATTGATGTATTGGAAGGTGG
 
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rJMSF019I02-          GGG                                                         
JMFF042D22+           GGGAATTGGGATTCCGGCCGAGGTAGAATGCTCCGGTGGGATTTATTCCCCGGCCGGGTT
JMFN006P15+           GGGAATTGGGATTCCGGCCGAGGTAGAATGCTCCGGTGGGATTTATTCCCCGGCCGGGTT
                      ____________________________________________________________
consensus             GGGAATTGGGATTCCGGCCGAGGTAGAATGCTCCGGTGGGATTTATTCCCCGGCCGGGTT
 
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JMFF042D22+           GCCGGACGGGGACGCAGTAAGAGAATTTTTGTATCTTCGCCTGGGAGGCAAACG      
JMFN006P15+           GCCGGACGGGGACGCAGTAAGAGAATTTTTGTATCTTCGCCTGGGAGGCAAACGATAACC
                      ____________________________________________________________
consensus             GCCGGACGGGGACGCAGTAAGAGAATTTTTGTATCTTCGCCTGGGAGGCAAACGATAACC
 
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JMFN006P15+           TCCCGGTGTTCATGCCCAAAATGCCCTGCGCCTCCGCGGATTCCGCCGCGCATCCAAGAA
                      ____________________________________________________________
consensus             TCCCGGTGTTCATGCCCAAAATGCCCTGCGCCTCCGCGGATTCCGCCGCGCATCCAAGAA