Contig 000295:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF006L20-                                                  GTGGCAGCTATATTAGTTAG
                      ____________________________________________________________
consensus                                                     GTGGCAGCTATATTAGTTAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF006L20-          CAATGGAAAGAAGGAAAGAAAGAAATATGAAACCAGCAAAACATGTCCCCATCCATAATC
                      ____________________________________________________________
consensus             CAATGGAAAGAAGGAAAGAAAGAAATATGAAACCAGCAAAACATGTCCCCATCCATAATC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF006L20-          ATTCAAATTCAAAACCTGCAGGCATCTGACAAGTGACACCAATACCCTGTTTTCTCCCTC
                      ____________________________________________________________
consensus             ATTCAAATTCAAAACCTGCAGGCATCTGACAAGTGACACCAATACCCTGTTTTCTCCCTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF006L20-          ACGACAATAATTCCAGCTATAATACCAGACAAACACCACCTACTAAATATACCACTATAC
                      ____________________________________________________________
consensus             ACGACAATAATTCCAGCTATAATACCAGACAAACACCACCTACTAAATATACCACTATAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF006L20-          TATACTACTATGATCAAACATCACAAACACAATTCCCCAACCCTGTCTCAAAACACCACC
                      ____________________________________________________________
consensus             TATACTACTATGATCAAACATCACAAACACAATTCCCCAACCCTGTCTCAAAACACCACC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF006L20-          AGCAATGCTGCTGCGGCTGCCGCAGTCACAGTGGCGGCAATGGATCCTGCCGCTGCCATT
                      ____________________________________________________________
consensus             AGCAATGCTGCTGCGGCTGCCGCAGTCACAGTGGCGGCAATGGATCCTGCCGCTGCCATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF006L20-          GCAGAAGACGGTGGCACTCCCTGAGCTGGCCCGGGCGCTACCTGATTAGATCCTATAGGT
                      ____________________________________________________________
consensus             GCAGAAGACGGTGGCACTCCCTGAGCTGGCCCGGGCGCTACCTGATTAGATCCTATAGGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF006L20-          GCGACTGCAATTGAGCTTGGAGGTTGCGCTAATGGCGATGGAGCTGGAGAAGAAATGCTG
                      ____________________________________________________________
consensus             GCGACTGCAATTGAGCTTGGAGGTTGCGCTAATGGCGATGGAGCTGGAGAAGAAATGCTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF006L20-          CCGGTGTTCAAGGCGCAGTTGCTAAAGGAGGGAGCGGAGACGTGGCAAGCGGAGGGGAGA
JMFF006L20+                     AGGCGCAGTTGCTAAAGGAGGGAGCGGAGACGTGGCAAGCGGAGGGGAGA
JMSF028G12+                     AGGCGCAGTTGCTAACGGAGGGAGCGGAGACGTGGCAAGCGGAGGGGAGA
JMFF051B13+                     AGGCGCAGTTGCTAACGGAGGGAGCGGAGACGTGGCAAGCGGAGGGGAGA
                      ____________________________________________________________
consensus             CCGGTGTTCAAGGCGCAGTTGCTAAAGGAGGGAGCGGAGACGTGGCAAGCGGAGGGGAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF006L20-          GCGAGGGCTTTGGTGACGTTGAGGACGACGCCGAGCTGGGCGCTGTTCTTAAACCCTTCG
JMFF006L20+           GCGAGGGCTTTGGTGACGTTGAGGACGACGCCGAGCTGGGCGCTGTTCTTAAACCCTTCG
JMSF028G12+           GCGAGGGCTTTGGTGACGTTGAGGACGACGCCGAGCTGGGCGCTGTTCTTAAACCCTTCG
JMFF051B13+           GCGAGGGCTTTGGTGACGTTGAGGACGACGCCGAGCTGGGCGCTGTTCTTAAACCCTTCG
                      ____________________________________________________________
consensus             GCGAGGGCTTTGGTGACGTTGAGGACGACGCCGAGCTGGGCGCTGTTCTTAAACCCTTCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF006L20-          CACAGGCACTCCGCGTTGGTTTTCAGCACCATTTTGAGGCCGGAGCAGCAGCTCCCCTGC
JMFF006L20+           CACAGGCACTCCGCGTTGGTTTTCAGCACCATTTTGAGGCCGGAGCAGCAGCTCCCCTGC
JMSF028G12+           CACAGGCACTCCGCGTTGGTTTTCAGCACCATTTTGAGGCCGGAGCAGCAGCTCCCCTGC
JMFF051B13+           CACAGGCACTCCGCGTTGGTTTTCAGCACCATTTTGAGGCCGGAGCAGCAGCTCCCCTGC
                      ____________________________________________________________
consensus             CACAGGCACTCCGCGTTGGTTTTCAGCACCATTTTGAGGCCGGAGCAGCAGCTCCCCTGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF006L20-          GGCTTCGCCTCGGTGCTGCCGTTGGTGACGAAGGTCAGGCAACCGGCCAGGTTGAGGATG
JMFF006L20+           GGCTTCGCCTCGGTGCTGCCGTTGGTGACGAAGGTCAGGCAACCGGCCAGGTTGAGGATG
JMSF028G12+           GGCTTCGCCTCGGTGCTGCCGTTGGTGACGAAGGTCAGGCAACCGGCCAGGTTGAGGATG
JMFF051B13+           GGCTTCGCCTCGGTGCTGCCGTTGGTGACGAAGGTCAGGCAACCGGCCAGGTTGAGGATG
                      ____________________________________________________________
consensus             GGCTTCGCCTCGGTGCTGCCGTTGGTGACGAAGGTCAGGCAACCGGCCAGGTTGAGGATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF006L20-          ACGCTGTTGCAATCCACCGCCGGCGCCGGCGCTGCATGGGTGCGCGGAGTCCACTGCGAT
JMFF006L20+           ACGCTGTTGCAATCCACCGCCGGCGCCGGCGCTGCAT-GGTGCGCGGAGTCCACTGCGAT
JMSF028G12+           ACGCTGTTGCAATCCACCGCCGGCGCCGGCGCTGCAT-GGTGCGCGGAGTCCACTGCGAT
JMFF051B13+           ACGCTGTTGCAATCCACCGCCGGCGCCGGCGCTGCAT-GGTGCGCGGAGTCCACTGCGAT
                      ____________________________________________________________
consensus             ACGCTGTTGCAATCCACCGCCGGCGCCGGCGCTGCAT-GGTGCGCGGAGTCCACTGCGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF006L20-          CGCCCATACTGCGAGCATGGCCACCGCTAGTGGCCC                        
JMFF006L20+           CGCCCATACTGCGAGCATGGCCACCGCTAGTGGCCCGATAGTGTTCAGTCCCGTCGCCAT
JMSF028G12+           CGCCCATACTGCGAGCATGGCCACCGCTAGTGGCCCGATAGTGTTCAGTCCCGTCGCCAT
JMFF051B13+           CGCCCATACTGCGAGCATGGCCACCGCTAGTGGCCCGATAGTGTTCAGTCCCGTCGCCAT
                      ____________________________________________________________
consensus             CGCCCATACTGCGAGCATGGCCACCGCTAGTGGCCCGATAGTGTTCAGTCCCGTCGCCAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF006L20+           TTTTGAAAAATTTTGAGTGATAGAAAGAAAGCCGGAGAAACAATTACGGAGAATTTTGAG
JMSF028G12+           TTTTGAAAAATTTTGAGTGATAGAAAGAAAGCCGGAGAAACAATTACGGAGAATTTTGAG
JMFF051B13+           TTTTGAAAAATTTTGAGTGATAGAAAGAAAGCCGGAGAAACAATTACGGAGAATTTTGAG
                      ____________________________________________________________
consensus             TTTTGAAAAATTTTGAGTGATAGAAAGAAAGCCGGAGAAACAATTACGGAGAATTTTGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF006L20+           GCCGTGGTGAGT                                                
JMSF028G12+           GCCGTGGTGAGT                                                
JMFF051B13+           GCCGTGGTGAGTGAAAGATCTTGGACTCTTTGGGTGGGTTATATAATGATGGAGATGGGG
                      ____________________________________________________________
consensus             GCCGTGGTGAGTGAAAGATCTTGGACTCTTTGGGTGGGTTATATAATGATGGAGATGGGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF051B13+           GGGACCGGCTGGGCTCAATGAGTCGGGTCGGGTGAGTTACGAGTGAGAATCGGGTATCAT
                      ____________________________________________________________
consensus             GGGACCGGCTGGGCTCAATGAGTCGGGTCGGGTGAGTTACGAGTGAGAATCGGGTATCAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF051B13+           GTGAACATGGAAATTTGGGGGGGCACGTGGCGTAATGGCCACGGAATTGATGTCTCCCGG
                      ____________________________________________________________
consensus             GTGAACATGGAAATTTGGGGGGGCACGTGGCGTAATGGCCACGGAATTGATGTCTCCCGG