Contig 000285:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF016B14Sequence564000285 (4)ref|XP_009588089.1|7e-11PREDICTED: LOW QUALITY PROTEIN: probable tyrosine--tRNA ligase, mitochondrial [542005524 (7)ref|XP_009591201.1|4e-55PREDICTED: probable tyrosine--tRNA ligase, mitochondrial [Nicotiana tomentosifo
JMFF045H23Sequence632000285 (4)ref|XP_009588089.1|2e-26PREDICTED: LOW QUALITY PROTEIN: probable tyrosine--tRNA ligase, mitochondrial [583005524 (7)ref|XP_009591201.1|1e-55PREDICTED: probable tyrosine--tRNA ligase, mitochondrial [Nicotiana tomentosifo
JMFF050E08Sequence579000285 (4)ref|XP_009588089.1|4e-11PREDICTED: LOW QUALITY PROTEIN: probable tyrosine--tRNA ligase, mitochondrial [571005524 (7)ref|XP_009591201.1|8e-56PREDICTED: probable tyrosine--tRNA ligase, mitochondrial [Nicotiana tomentosifo
JMSF008D13Sequence358000285 (4)118005524 (7)

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF045H23+ TAAGGCCAAGAAGGTTTCCAAGATGGAGGCTTT
                      ____________________________________________________________
consensus TAAGGCCAAGAAGGTTTCCAAGATGGAGGCTTT
 
. : . : . : . : . : . :
JMFF016B14+ GGTGGGAGATTCGGATCGGAGCAAA
JMFF045H23+ CAGCCGTCGGGTCAAACCCACAATAGACTNTGAGGGGTGGGAGATTCGGATCGGAGCAAA
JMFF050E08+ ATTCGGATCGGAGCAAA
                      ____________________________________________________________
consensus CAGCCGTCGGGTCAAACCCACAATAGACTNTGAGGGGTGGGAGATTCGGATCGGAGCAAA
 
. : . : . : . : . : . :
JMFF016B14+ TTGAACGGAGGTTTTCGCTAGTGACGGACTCCAGTAATCCTCTCTCCTCTAAAATCTCCA
JMFF045H23+ TTGAACGGAGGTTTTCGCTAGTGACGGACTCCAGTAATCCTCTCTCCTCTAAAATCTCCA
JMFF050E08+ TTGAACGGAGGTNTTCGCTAGTGACGGACTCCAGTAATCCTCTCTCCTCTAAAATCTCCA
                      ____________________________________________________________
consensus TTGAACGGAGGTTTTCGCTAGTGACGGACTCCAGTAATCCTCTCTCCTCTAAAATCTCCA
 
. : . : . : . : . : . :
JMFF016B14+ CCACGTTCCGCCTTCGCTGCCGCTGGTCGGATTCCATCTCCGGCTCACTCTTGAGCTGGG
JMFF045H23+ CCACGTTCCGCCTTCGCTGCCGCTGGTCGGATTCCATCTCCGGCTCACTCTTGAGCTGGG
JMFF050E08+ CCACGTTCCGCCTTCGCTGCCGCTGGTCGGATTCCATCTCCGGCTCACTCTTGAGCTGGG
                      ____________________________________________________________
consensus CCACGTTCCGCCTTCGCTGCCGCTGGTCGGATTCCATCTCCGGCTCACTCTTGAGCTGGG
 
. : . : . : . : . : . :
JMFF016B14+ GAATAAACTGGGCGGAGGAGCACAACGGCGATGAAGAATAGCAAAAGAGGCTGCTGCGGC
JMFF045H23+ GAATAAACTGGGCGGAGGAGCACAACGGCGATGAAGAATAGCAAAAGAGGCTGCTGCGGC
JMFF050E08+ GAATAAACTGGGCGGAGGAGCACAACGGCGATGAAGAATAGCAAAAGAGGCTGCTGCGGC
                      ____________________________________________________________
consensus GAATAAACTGGGCGGAGGAGCACAACGGCGATGAAGAATAGCAAAAGAGGCTGCTGCGGC
 
. : . : . : . : . : . :
JMFF016B14+ GGCGGTGAGAAGTGAGTAGTCGGATTGGGAATTTTTGGATGAAAAGGGGAGAGAAGTGCC
JMFF045H23+ GGCGGTGAGAAGTGAGTAGTCGGATTGGGAATTTTTGGATGAAAAGGGGAGAGAAGTGCC
JMSF008D13+ TGAGAAGTGAGTANTCGGATTGGGAATTTTTGGATGAAAAGGGGAGAGAAGTGCC
JMFF050E08+ GGCGGTGAGAAGTGAGTAGTCGGATTGGGAATTTTTGGATGAAAAGGGGAGAGAAGTGCC
                      ____________________________________________________________
consensus GGCGGTGAGAAGTGAGTAGTCGGATTGGGAATTTTTGGATGAAAAGGGGAGAGAAGTGCC
 
. : . : . : . : . : . :
JMFF016B14+ TATGGGCGCCATTAAGAATAAAGGTTCTGACAGAAGCCATGCGTGCGTTAGTGTTATCTG
JMFF045H23+ TATGGGCGCCATTAAGAATAAAGGTTCTGACAGAAGCCATGCGTGCGTTAGTGTTATCTG
JMSF008D13+ TATGGGCGCCATTAAGAATAAAGGTTCTGACAGAAGCCATGCGTGCGTTAGTGTTATCTG
JMFF050E08+ TATGGGCGCCATTAAGAATAAAGGTTCTGACAGAAGCCATGCGTGCGTTAGTGTTATCTG
                      ____________________________________________________________
consensus TATGGGCGCCATTAAGAATAAAGGTTCTGACAGAAGCCATGCGTGCGTTAGTGTTATCTG
 
. : . : . : . : . : . :
JMFF016B14+ CACACTAAAGAGTTTTGTGGATAGCAGCAATGGAGGATACCAATAGGCGAATTTGTAGCT
JMFF045H23+ CACACTAAAGAGTTTTGTGGATAGCAGCAATGGAGGATACCAATAGGCGAATTTGTAGCT
JMSF008D13+ CACACTAAAGAGTTTTGTGGATAGCAGCAATGGAGGATACCAATAGGCGAATTTGTAGCT
JMFF050E08+ CACACTAAAGAGTTTTGTGGATAGCAGCAATGGAGGATACCAATAGGCGAATTTGTAGCT
                      ____________________________________________________________
consensus CACACTAAAGAGTTTTGTGGATAGCAGCAATGGAGGATACCAATAGGCGAATTTGTAGCT
 
. : . : . : . : . : . :
JMFF016B14+ TAAGTTATGATGTTGAACTGAATACTGAGAGGAGACCAGAGGCACTGCCGGCGGTTCTTG
JMFF045H23+ TAAGTTATGATGTTGAACTGAATACTGAGAGGAGACCAGAGGCACTGCCGGCGGTTCTTG
JMSF008D13+ TAAGTTATGATGTTGAACTGAATACTGAGAGGAGACCAGAGGCACTGCCGGCGGTTCTTG
JMFF050E08+ TAAGTTATGATGTTGAACTGAATACTGAGAGGAGACCAGAGGCACTGCCGGCGGTTCTTG
                      ____________________________________________________________
consensus TAAGTTATGATGTTGAACTGAATACTGAGAGGAGACCAGAGGCACTGCCGGCGGTTCTTG
 
. : . : . : . : . : . :
JMFF016B14+ CTGACCGGCGGGCGGCGACTGAGGGCTGAGGGGGTTACGGCGGTAAGGCGGCGAGCCGGA
JMFF045H23+ CTGACCGGCGGGCGGCGACTGAGGGCTGAGGGGGTTACGGCGGTAAGGCGGCGAGCCGGA
JMSF008D13+ CTGACCGGCGGGCGGCGACTGAGGGCTGAGGGGGTTACGGCGGTAAGGCGGCGAGCCGGA
JMFF050E08+ CTGACCGGCGGGCGGCGACTGAGGGCTGAGGGGGTTACGGCGGTAAGGCGGCGAGCCGGA
                      ____________________________________________________________
consensus CTGACCGGCGGGCGGCGACTGAGGGCTGAGGGGGTTACGGCGGTAAGGCGGCGAGCCGGA
 
. : . : . : . : . : . :
JMFF016B14+ AGCGGTGAAGCAGCGACCCCGGCGACTCCAGTCTCCAAAGCTCTGCGTGAAC
JMFF045H23+ AGCGGTGAAGCAGCGACCCCGGCGACTCCAGTCTCCAAAGCTCTGCGTGAAC
JMSF008D13+ AGCGGTGAAGCAGCGACTCCGGCGACTCCAGTCTCCAAAGCTCTGCGTGAAC
JMFF050E08+ AGCGGTGAAGCAGCGACTCCGGCGACTCCAGTCTCCAAAGCTCTGCGTGAACTGCTATCT
                      ____________________________________________________________
consensus AGCGGTGAAGCAGCGACTCCGGCGACTCCAGTCTCCAAAGCTCTGCGTGAACTGCTATCT