Contig 000279:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF034I15Sequence371000279 (2)ref|XP_009784492.1|5e-10PREDICTED: transcription initiation factor TFIID subunit 15b-like [Nicotiana sy703008364 (3)gb|EPS58304.1|3e-64hypothetical protein M569_16511 [Genlisea aurea]
JMFF049K01Sequence411000279 (2)ref|XP_009784492.1|9e-10PREDICTED: transcription initiation factor TFIID subunit 15b-like [Nicotiana sy

Alignment

This contig is upended


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JMFF034I15+                                                            GGTTACCACCA
JMFF049K01+                    ACAGGAGGTCCTTGGCCATAACCACTGCCATCTCTTCCCTGGTTACCACCA
                      ____________________________________________________________
consensus                      ACAGGAGGTCCTTGGCCATAACCACTGCCATCTCTTCCCTGGTTACCACCA
 
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JMFF034I15+           TAAGAACTGCTTGTACCACCTCCACCACTTCCACTATCAAAACTCCCNCCTCTCCCACCT
JMFF049K01+           TAAGAACTGCTTCTACCACCTCCACCACTTCCACTATCAAAACTCCCACCTCTCCCACCT
                      ____________________________________________________________
consensus             TAAGAACTGCTTGTACCACCTCCACCACTTCCACTATCAAAACTCCCACCTCTCCCACCT
 
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JMFF034I15+           CGATTATTTCCATATGAGCCACCACCACCACCACCACCTCCACCTCTGTTATAACTGTTA
JMFF049K01+           CGATTATTTCCATATGAGCCACCACCACCACCACCACCTCCACCTCTGTTATAACTGTTA
                      ____________________________________________________________
consensus             CGATTATTTCCATATGAGCCACCACCACCACCACCACCTCCACCTCTGTTATAACTGTTA
 
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JMFF034I15+           CCACCTCTGCCACCACGATCATCAGTACCAGCAGGAGAAGGCTCACCACATTTGTTACAT
JMFF049K01+           CCACCTCTGCCACCACGATCATCAGTACCAGCAGGAGAAGGCTCACCACATTTGTTACAT
                      ____________________________________________________________
consensus             CCACCTCTGCCACCACGATCATCAGTACCAGCAGGAGAAGGCTCACCACATTTGTTACAT
 
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JMFF034I15+           TCAACTCTTCTAGCAAAGTTCAAATTCCCACAACTTGGGTTAGGGCAACGCCAATCCCCT
JMFF049K01+           TCAACTCTTCTAGCAAAGTTCAAATTCCCACAACTTGGGTTAGGGCAACGCCAATCCCCT
                      ____________________________________________________________
consensus             TCAACTCTTCTAGCAAAGTTCAAATTCCCACAACTTGGGTTAGGGCAACGCCAATCCCCT
 
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JMFF034I15+           TCCCTGCCGCTTCCACCACCGCGACCACCTCCCCTACCGCCTCCACCGCCTCCACCGCGA
JMFF049K01+           TCCCTGCCGCTTCCACCACCGCGACCACCTCCCCTACCGCCTCCACCGCCTCCACCGCGA
                      ____________________________________________________________
consensus             TCCCTGCCGCTTCCACCACCGCGACCACCTCCCCTACCGCCTCCACCGCCTCCACCGCGA
 
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JMFF034I15+           CCACCACGATCACCACGATCACCTCCTTGATGTCCACCGCCGCCACCATATCCTCCACAT
JMFF049K01+           CCACCACGATCACCACGATCACCTCCTTGATGTCCACCGCCGCCACCATATCCTCCACAT
                      ____________________________________________________________
consensus             CCACCACGATCACCACGATCACCTCCTTGATGTCCACCGCCGCCACCATATCCTCCACAT