Contig 000272:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010P24Sequence566000272 (3)ref|XP_002513511.1|1e-49transferase, transferring glycosyl groups, putative [Ricinus communis] gb|EEF48777009832 (2)ref|XP_010252349.1|2e-131PREDICTED: probable beta-1,3-galactosyltransferase 8 [Nelumbo nucifera]
JMFF048H07Sequence346000272 (3)ref|XP_002513511.1|3e-14transferase, transferring glycosyl groups, putative [Ricinus communis] gb|EEF48272009832 (2)ref|XP_010677269.1|1e-07PREDICTED: probable beta-1,3-galactosyltransferase 8 isoform X2 [Beta vulgaris
JMFS101E11Sequence606000272 (3)ref|XP_009757632.1|1e-57PREDICTED: probable beta-1,3-galactosyltransferase 8 isoform X3 [Nicotiana sylv

Alignment

This contig is upended


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JMFS101E11+                                        TGTAAGACTATCCCCTTCTCTTTCTCTAATT
                      ____________________________________________________________
consensus                                          TGTAAGACTATCCCCTTCTCTTTCTCTAATT
 
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JMFS101E11+           TCTTTAGCTCATCTCCTTTTGGCATCCATGTTTCGCGGAGAGAGTCACGCCTTCTTCTGC
JMFF010P24+                                             GCGGAGAGAGTCACGCCTTCTTCTGC
                      ____________________________________________________________
consensus             TCTTTAGCTCATCTCCTTTTGGCATCCATGTTTCGCGGAGAGAGTCACGCCTTCTTCTGC
 
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JMFS101E11+           TGCTAAATGCTGTGTTAATCCCTATGACAACAAATGCTTTCTGTAGGCTGTGATTAGCGG
JMFF010P24+           TGCTAAATGCTGTGTTAATCCCTATGACAACAAATGCTTTCTGTAGGCTGTGATTAGCGG
                      ____________________________________________________________
consensus             TGCTAAATGCTGTGTTAATCCCTATGACAACAAATGCTTTCTGTAGGCTGTGATTAGCGG
 
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JMFS101E11+           CTCCTTCTGTTGCAGTCTGGCTGCCAATTCGGCTTGTTCTTGCAACGGCCAGCTCCATCT
JMFF010P24+           CTCCTTCTGTTGCAGTCTGGCTGCCAATTCGGCTTGTTCTTGCAACGGCCAGCTCCATCT
                      ____________________________________________________________
consensus             CTCCTTCTGTTGCAGTCTGGCTGCCAATTCGGCTTGTTCTTGCAACGGCCAGCTCCATCT
 
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JMFS101E11+           CCAATGTTGATATTGTTTTTTCAAGTGACTGGATAGCATGATGAGTCTTCTTGACCTCTC
JMFF010P24+           CCAATGTTGATATTGTTTTTTCAAGTGACTGGATAGCATGATGAGTCTTCTTGACCTCTC
                      ____________________________________________________________
consensus             CCAATGTTGATATTGTTTTTTCAAGTGACTGGATAGCATGATGAGTCTTCTTGACCTCTC
 
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JMFS101E11+           CCATGATGTCTCTTGTATTAGTTTCGACAAGTTTGCGCTTGTGATCACAGTCACGGTTGA
JMFF010P24+           CCATGATGTCTCTTGTATTAGTTTCGACAAGTTTGCGCTTGTGATCACAGTCACGGTTGA
JMFF048H07+                         GTATTAGTTTCGACAAGTTTGCGCTTGTGATCACAGTCACGGTTGA
                      ____________________________________________________________
consensus             CCATGATGTCTCTTGTATTAGTTTCGACAAGTTTGCGCTTGTGATCACAGTCACGGTTGA
 
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JMFS101E11+           GAGTTCTGAGTTTCATGTCATCTGTAATGTCTGAATGCAGGTTCCAAGTCCGGCTGCTGA
JMFF010P24+           GAGTTCTGAGTTTCATGTCATCTGTAATGTCTGAATGCAGGTTCCAAGTCCGGCTGCTGA
JMFF048H07+           GAGTTCTGAGTTTCATGTCATCTGTAATGTCTGAATGCAGGTTCCAAGTCCGGCTGCTGA
                      ____________________________________________________________
consensus             GAGTTCTGAGTTTCATGTCATCTGTAATGTCTGAATGCAGGTTCCAAGTCCGGCTGCTGA
 
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JMFS101E11+           AAAGTGATCCTGCAAGGAAGGTTGCAACGCAGAGCACAAATATGGCTTTTCCAGAAACCG
JMFF010P24+           AAAGTGATCCTGCAAGGAAGGTTGCAACGCAGAGCACAAATATGGCTTTTCCAGAAACCG
JMFF048H07+           AAAGTGATCCTGCAAGGAAGGTTGCAACGCAGAGCACAAATATGGCTTTTCCAGAAACCG
                      ____________________________________________________________
consensus             AAAGTGATCCTGCAAGGAAGGTTGCAACGCAGAGCACAAATATGGCTTTTCCAGAAACCG
 
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JMFS101E11+           CTTTCCCCCTCATTTTTGAACTCTCGCTGCTGTTGAGCTGCCTCGACCACAAGATCAGCT
JMFF010P24+           CTTTCCCCCTCATTTTTGAACTCTCGCTGCTGTTGAGCTGCCTCGACCACAAGATCAGCT
JMFF048H07+           CTTTCCCCCTCATTTTTGAACTCTCGCTGCTGTTGAGCTGCCTCGACCACAAGATCAGCT
                      ____________________________________________________________
consensus             CTTTCCCCCTCATTTTTGAACTCTCGCTGCTGTTGAGCTGCCTCGACCACAAGATCAGCT
 
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JMFS101E11+           GCAGTCCAGGTACTAGCTTCTTTTGCACCTGCAGCCAC-------CTGTTAACGAGGGGA
JMFF010P24+           GCAGTCCAGGTACTAGCTTCTTTTGCACCTGCAGCCACCTATAATCTGTTAACGAGGGGA
JMFF048H07+           GCAGTCCAGGTACTAGCTTCTTTTGCACCTGCAGCCACCTATAATCTGTTAACGAGGGGA
                      ____________________________________________________________
consensus             GCAGTCCAGGTACTAGCTTCTTTTGCACCTGCAGCCACCTATAATCTGTTAACGAGGGGA
 
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JMFS101E11+           GCCGCGATCATGGGAACCAAATTCCTGTTATTACTGAATCAT                  
JMFF010P24+           GCCGCGATCATGGGAACCAAATTCCTGTTATTACTGAATCATTCGTGCAGTGGCCATGAT
JMFF048H07+           GCCGCGATCATGGGAACCAAATTCCTGTTATTACTGAATCATTCGTGCAGTGGCCATGAT
                      ____________________________________________________________
consensus             GCCGCGATCATGGGAACCAAATTCCTGTTATTACTGAATCATTCGTGCAGTGGCCATGAT