Contig 000257:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF028O02Sequence361000257 (2)ref|XP_011096008.1|3e-17PREDICTED: probable membrane-associated kinase regulator 1 [Sesamum indicum]281002693 (2)ref|XP_011096008.1|1e-10PREDICTED: probable membrane-associated kinase regulator 1 [Sesamum indicum]
JMFF045M15Sequence588000257 (2)ref|XP_009781196.1|120PREDICTED: uncharacterized protein LOC104230157 [Nicotiana sylvestris]542002693 (2)ref|XP_006348166.1|7e-24PREDICTED: cell wall protein AWA1-like [Solanum tuberosum]

Alignment

This contig is upended


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JMFF045M15+                       GTTCCCCGCCGATCTGCTCCGCGAAAACGGCCAGATATTTATGTTCAG
                      ____________________________________________________________
consensus                         GTTCCCCGCCGATCTGCTCCGCGAAAACGGCCAGATATTTATGTTCAG
 
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JMFF045M15+           CTCCGCCGCGCTCGCCCCGTTATGTCCAATCACGCCGCCCTTCTTCTCCTTCTTCTCTTT
                      ____________________________________________________________
consensus             CTCCGCCGCGCTCGCCCCGTTATGTCCAATCACGCCGCCCTTCTTCTCCTTCTTCTCTTT
 
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JMFF045M15+           CTCCTTCACATTCTCCTCAACCGATCCCTTCTTCTCCTTCTTCTCCCCTTTTTTAAAAAT
                      ____________________________________________________________
consensus             CTCCTTCACATTCTCCTCAACCGATCCCTTCTTCTCCTTCTTCTCCCCTTTTTTAAAAAT
 
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JMFF028O02+                                                                      C
JMFF045M15+           ATCCTTCCACCGCTTCGAACCGCCAACCATGGCGCCGCCGCCGCCAGACGACCCGTCCAC
                      ____________________________________________________________
consensus             ATCCTTCCACCGCTTCGAACCGCCAACCATGGCGCCGCCGCCGCCAGACGACCCGTCCAC
 
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JMFF028O02+           CGCCGCCGCCGCAGAAACCCCGGGTCGGGTCGACCCGGACGTTTCCGGCGGGTCAGTATC
JMFF045M15+           CGCCGCCGCCGCAGAAACCCCGGGTCGGGTCGACCCGGACGTTTCCGGCGGGTCAGTATC
                      ____________________________________________________________
consensus             CGCCGCCGCCGCAGAAACCCCGGGTCGGGTCGACCCGGACGTTTCCGGCGGGTCAGTATC
 
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JMFF028O02+           ACATGACCCAAAAATTTCTCCCGGAGACTCATCGGAGCAAGCGTTACCTTCNTGCGGGAG
JMFF045M15+           ACATGACCCAAAAATTTCTCCCGGAGACTCATCGGAGCAAGCGTTACCTTCCTGCGGGAG
                      ____________________________________________________________
consensus             ACATGACCCAAAAATTTCTCCCGGAGACTCATCGGAGCAAGCGTTACCTTCCTGCGGGAG
 
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JMFF028O02+           GAGATCAAGCGGTAACAGGACTCCATCGGAGAAAAGCTCATCGGCGGAGAGAAGGTTGGG
JMFF045M15+           GAGATCAAGCGGTAACAGGACTCCATCGGAGAAAAGCTCATCGGCGGAGAGAAGGTTGGG
                      ____________________________________________________________
consensus             GAGATCAAGCGGTAACAGGACTCCATCGGAGAAAAGCTCATCGGCGGAGAGAAGGTTGGG
 
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JMFF028O02+           CTGAGGGAAAGACGGGTTCCGGAGCATCCAGAACTNGAATTCCGGCGAGGTGGCATCCCC
JMFF045M15+           CTGAGGGAAAGACGGGTTCCGGAGCATCCAGAACTCAAATTCCGGCGAGGTGGCATCCCC
                      ____________________________________________________________
consensus             CTGAGGGAAAGACGGGTTCCGGAGCATCCAGAACTCGAATTCCGGCGAGGTGGCATCCCC
 
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JMFF028O02+           GCTTCTTCTTCCACTGCTGCATGGCGAGAGAATTCCCGGCCGCTGACCATCCATTTCCTC
JMFF045M15+           GCTTCTTCTTCCACTGCTGCATGGCGAGAGAATTCCCGGCCGCTGACCATCCATTTCCTC
                      ____________________________________________________________
consensus             GCTTCTTCTTCCACTGCTGCATGGCGAGAGAATTCCCGGCCGCTGACCATCCATTTCCTC
 
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JMFF028O02+           TTCTTCCTTCCCTCTCTGGTTCTGTGTGTTTCCCGGAGCTTTTAGTGAGAGAATGG    
JMFF045M15+           TTCTTCCTTCCCTCTCTGGTTCTGTGTGTTTCCCGGAGCTTTTAGTGAGAGAATGGTCCT
                      ____________________________________________________________
consensus             TTCTTCCTTCCCTCTCTGGTTCTGTGTGTTTCCCGGAGCTTTTAGTGAGAGAATGGTCCT