Contig 000246:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF044D07Sequence650000246 (2)gb|EYU44206.1|2e-11hypothetical protein MIMGU_mgv1a001236mg [Erythranthe guttata]644010528 (3)ref|XP_009792505.1|6e-46PREDICTED: protein LONGIFOLIA 1-like [Nicotiana sylvestris]
JMFF047E05Sequence541000246 (2)ref|XP_011099024.1|5e-08PREDICTED: protein LONGIFOLIA 2-like [Sesamum indicum]475010528 (3)ref|XP_009623904.1|1e-23PREDICTED: protein LONGIFOLIA 2-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMFF044D07+                     AGAAGAAGACGAAGAAGAAAGGACCTTGTATGACTCATCAGAACCCACCA
                      ____________________________________________________________
consensus                       AGAAGAAGACGAAGAAGAAAGGACCTTGTATGACTCATCAGAACCCACCA
 
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JMFF044D07+           CTCGTTCCACTTCCATTTCTGTTGCGATTCTGGGCTCCCCATTGTGGTTTGCACCTGTAA
                      ____________________________________________________________
consensus             CTCGTTCCACTTCCATTTCTGTTGCGATTCTGGGCTCCCCATTGTGGTTTGCACCTGTAA
 
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JMFF047E05+                         TTATGGCAATCGGCTCGTTTGCCAGTGAAGAAATGGTGCCTGTCGA
JMFF044D07+           CGGGTTTTTTGTTGTTATGGCAATCGGCTCGTTTGCCAGTGAAGAAATGGTGCCTGTCGA
                      ____________________________________________________________
consensus             CGGGTTTTTTGTTGTTATGGCAATCGGCTCGTTTGCCAGTGAAGAAATGGTGCCTGTCGA
 
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JMFF047E05+           ACAGCTGGAATATCACATTTATGCACCCAATCTGCTTGCGTAGATCATGGTGGGCATCTT
JMFF044D07+           ACAGCTGGAATATCACATTTATGCACCCAATCTGCTTGCGTAGATCATGGTGGGCATCTT
                      ____________________________________________________________
consensus             ACAGCTGGAATATCACATTTATGCACCCAATCTGCTTGCGTAGATCATGGTGGGCATCTT
 
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JMFF047E05+           TCACCGAAGATGGTATCCCCGAAGACATCTCTCTAGTCTCTCCTCTCTTCTTCTAACACG
JMFF044D07+           TCACCGAAGATGGTATCCCCGAAGACATCTCTCTAGTCTCTCCTCTCTTCTTCTAACACG
                      ____________________________________________________________
consensus             TCACCGAAGATGGTATCCCCGAAGACATCTCTCTAGTCTCTCCTCTCTTCTTCTAACACG
 
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JMFF047E05+           CTGACTGGTTAGAACGACAGAATCTCTCCCATTCCCTCCTCCTCCAGGTATCTTCGCGTA
JMFF044D07+           CTGACTGGTTAGAACGACAGAATCTCTCCCATTCCCTCCTCCTCCAGGTATCTTCGCGTA
                      ____________________________________________________________
consensus             CTGACTGGTTAGAACGACAGAATCTCTCCCATTCCCTCCTCCTCCAGGTATCTTCGCGTA
 
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JMFF047E05+           TCAATGGTGCAGACGGGACGAGACTATAACAGAACGAAGCTTCCTCAACACCCACCACTG
JMFF044D07+           TCAATGGTGCAGACGGGACGAGACTATAACAGAACGAAGCTTCCTCAACACCCACCACTG
                      ____________________________________________________________
consensus             TCAATGGTGCAGACGGGACGAGACTATAACAGAACGAAGCTTCCTCAACACCCACCACTG
 
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JMFF047E05+           AAAACTAGCGGGTAAGCATCTGTTTCCTCCTTCGCCTTACACGCTATATATGCTGCAAAA
JMFF044D07+           AAAACTAGCGGGTAAGCATCTGTTTCCTCCTTCGCCTTACACGCTATATATGCTGCAAAA
                      ____________________________________________________________
consensus             AAAACTAGCGGGTAAGCATCTGTTTCCTCCTTCGCCTTACACGCTATATATGCTGCAAAA
 
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JMFF047E05+           TGAGTAGACTGTGTGTGTATTGTGTATGTAATGTATGTTAAGTAGAATTGAAGGGAAATC
JMFF044D07+           TGAGTAGACTGTGTGTGTATTGTGTATGTAATGTATGTTAAGTAGAATTGAAGGGAAATC
                      ____________________________________________________________
consensus             TGAGTAGACTGTGTGTGTATTGTGTATGTAATGTATGTTAAGTAGAATTGAAGGGAAATC
 
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JMFF047E05+           TTGAGGGCCAAGAAGAGAAGTCCTTTTGGGTTTCTTAACAGAAAGGAAAAAGTTTGCAGG
JMFF044D07+           TTGAGGGCCAAGAAGAGAAGTCCTTTTGGGTTTCTTAACAGAAAGGAAAAAGTTTGCAGG
                      ____________________________________________________________
consensus             TTGAGGGCCAAGAAGAGAAGTCCTTTTGGGTTTCTTAACAGAAAGGAAAAAGTTTGCAGG
 
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JMFF047E05+           CAGAGTTTTGTCTTTTGTCACTCTCAAGGAAGGAGGGAGATGCTGCTTAGTTAATTCCGG
JMFF044D07+           CAGAGTTTTGTCTTTTGTCACTCTCAAGGAAGGAGGGAGATGCTGCTTAGTTTATTCCGG
                      ____________________________________________________________
consensus             CAGAGTTTTGTCTTTTGTCACTCTCAAGGAAGGAGGGAGATGCTGCTTAGTTTATTCCGG