Contig 000208:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF036N03Sequence526000208 (4)767006928 (5)ref|XP_009781661.1|2e-83PREDICTED: lysine-specific demethylase JMJ25-like [Nicotiana sylvestris]
JMFF048M11Sequence576000208 (4)610006928 (5)ref|XP_004237549.1|2e-64PREDICTED: lysine-specific demethylase JMJ25-like [Solanum lycopersicum]
JMFS164G05Sequence582000208 (4)
JMSF007N20Sequence333000208 (4)808006928 (5)ref|XP_009781661.1|3e-84PREDICTED: lysine-specific demethylase JMJ25-like [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS164G05+ TCCATCTTTCCCTCTAAATTCCCCT
                      ____________________________________________________________
consensus TCCATCTTTCCCTCTAAATTCCCCT
 
. : . : . : . : . : . :
JMFS164G05+ TATCTGACGCAAAAACTGTCTCGCTACTAATATTCTTCTTCGGGGGTCTTCCTCTTTTCC
JMFF048M11+ TCTTCGGGGGTCTTCCTCTTTTCC
                      ____________________________________________________________
consensus TATCTGACGCAAAAACTGTCTCGCTACTAATATTCTTCTTCGGGGGTCTTCCTCTTTTCC
 
. : . : . : . : . : . :
JMFS164G05+ GGCGAGGCTTCTGCTCCGGCGGAGAGGCATCTTTTATATTCTCCGGCTTTACCATATTTT
JMFF048M11+ GGCGAGGCTTCTGCTCCGGCGGAGAGGCATCTNTTATATTCTCCGGCTTTACCATATTTT
JMFF036N03+ TCCGGCGGAGAGGCATCTTTTATATTCTCCGGCTTTACCATATTTT
                      ____________________________________________________________
consensus GGCGAGGCTTCTGCTCCGGCGGAGAGGCATCTTTTATATTCTCCGGCTTTACCATATTTT
 
. : . : . : . : . : . :
JMFS164G05+ CAACCTCGGAAGCGCCGTTCATTTTCATTTCACATCCCGCTGAACCCGCATTCCCTTTCC
JMFF048M11+ CAACCTCGGAAGCGCCGTTCATTTTCATTTCACATCCCGCTGAACCCGCATTCCCTTTCC
JMFF036N03+ CAACCTCGGAAGCGCCGTTCATTTTCATTTCACATCCCGCTGAACCCGCATTCCCTTTCC
                      ____________________________________________________________
consensus CAACCTCGGAAGCGCCGTTCATTTTCATTTCACATCCCGCTGAACCCGCATTCCCTTTCC
 
. : . : . : . : . : . :
JMFS164G05+ CATCAGTAAAACTAACGGCTTCTTCTGGTCGAGTCAGCTCCGGCGACTTCTCCTTTTCCT
JMFF048M11+ CATCAGTAAAACTAACGGCTTCTTCTGGTCGAGTCAGCTCCGGCGACTTCTCCTTTTCCT
JMFF036N03+ CATCAGTAAAACTAACGGCTTCTTCTGGTCGAGTCAGCTCCGGCGACTTCTCCTTTTCCT
                      ____________________________________________________________
consensus CATCAGTAAAACTAACGGCTTCTTCTGGTCGAGTCAGCTCCGGCGACTTCTCCTTTTCCT
 
. : . : . : . : . : . :
JMFS164G05+ CCGGCCGGTACAGTTCGAGCCTTGTATCCAAATTCAAGCAGATCTCGAGCTTAACATCCT
JMFF048M11+ CCGGCCGGTACAGTTCGAGCCTTGTATCCAAATTCAAGCAGATCTCGAGCTTAACATCCT
JMSF007N20+ GGCCGGTACAGTTCGAGCCTNGTATCCAAATTCAAGCAGATCTCGAGCTTAACATCCT
JMFF036N03+ CCGGCCGGTACAGTTCGAGCCTTGTATCCAAATTCAAGCAGATCTCGAGCTTAACATCCT
                      ____________________________________________________________
consensus CCGGCCGGTACAGTTCGAGCCTTGTATCCAAATTCAAGCAGATCTCGAGCTTAACATCCT
 
. : . : . : . : . : . :
JMFS164G05+ GCTCGTTCGATCCCTCCATAGCTCCCACCTTCAGGCTTCAGCCCGCCTACTTAATTGGAA
JMFF048M11+ GCTCGTTCGATCCCTCCATAGCTCCCACCTTCAGGCTTCAGCCCGCCTACTTAATTGGAA
JMSF007N20+ GCTCGTTCGATCCCTCCATAGCTCCCACCTTCAGGCTTCAGCCCGCCTACTTAATTGGAA
JMFF036N03+ GCTCGTTCGATCCCTCCATAGCTCCCACCTTCAGGCTTCAGCCCGCCTACTTAATTGGAA
                      ____________________________________________________________
consensus GCTCGTTCGATCCCTCCATAGCTCCCACCTTCAGGCTTCAGCCCGCCTACTTAATTGGAA
 
. : . : . : . : . : . :
JMFS164G05+ TATTACAGCAATTTTTCACAGTCAACAGAGTGAAATTCGGCAAAAATCGAGAACAACAAA
JMFF048M11+ TATTACAGCAATTTTTCACAGTCAACAGAGTGAAATTCGGCAAAAATCGAGAACAACAAA
JMSF007N20+ TATTACAGCAATTTTTCACAGTCAACAGAGTGAAATTCGGCAAAAATCGAGAACAACAAA
JMFF036N03+ TATTACAGCAATTTTTCACAGTCAACAGAGTGAAATTCGGCAAAAATCGAGAACAACAAA
                      ____________________________________________________________
consensus TATTACAGCAATTTTTCACAGTCAACAGAGTGAAATTCGGCAAAAATCGAGAACAACAAA
 
. : . : . : . : . : . :
JMFS164G05+ TATTCTCTAAAAAAATTCAATTTTTTTGGCCGCTGGATTTGAGGAGTGAGAATGAATGGT
JMFF048M11+ TATTCTCTAAAAAAATTCAATTTTTTTGGCCGCTGGATTTGAGGAGTGAGAATGAATGGT
JMSF007N20+ TATTCTCTAAAAAAATTCAATTTTTTTGGCCGCTGGATTTGAGGAGTGAGAATGAATGGT
JMFF036N03+ TATTCTCTAAAAAAATTCAATTTTTTTGGCCGCTGGATTTGAGGAGTGAGAATGAATGGT
                      ____________________________________________________________
consensus TATTCTCTAAAAAAATTCAATTTTTTTGGCCGCTGGATTTGAGGAGTGAGAATGAATGGT
 
. : . : . : . : . : . :
JMFS164G05+ TTTGAAACTGTGGGTGGGAAGAGTGAATGCGGTAAATAAATATGCTTTTTAAAAAATCCC
JMFF048M11+ TTTGAAACTGTGGGTGGGAAGAGTGAATGCGGTAAATAAATATGCTTTTTAAAAAATCCC
JMSF007N20+ TTTGAAACTGTGGGTGGGAAGAGTGAATGCGGTAAATAAATATGCTTTTTAAAAAATCCC
JMFF036N03+ TTTGAAACTGTGGGTGGGAAGAGTGAATGCGGTAAATAAATATGCTTTTTAAAAAATCCC
                      ____________________________________________________________
consensus TTTGAAACTGTGGGTGGGAAGAGTGAATGCGGTAAATAAATATGCTTTTTAAAAAATCCC
 
. : . : . : . : . : . :
JMFS164G05+ GCCTTCCCTTCCCTTCC
JMFF048M11+ GCCTTCCCTTCCCTTCCCTATCAATTCATCAATCAACAGCAGATTTGGGGGCCGGAGC
JMSF007N20+ GCCTTCCCTTCCCTTCCCTATCAATTCATCAATC
JMFF036N03+ GCCTTCCCTTCCCTTCCCTATCAATTCATCAATCAACAGCAGATTTGGGGGCCGGAGCAG
                      ____________________________________________________________
consensus GCCTTCCCTTCCCTTCCCTATCAATTCATCAATCAACAGCAGATTTGGGGGCCGGAGCAG