Contig 000202:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF035O05-                     TTATGATCTTACAATAGTAAAAAATACTGGATGTCTAAAACGATCATAC
                      ____________________________________________________________
consensus                        TTATGATCTTACAATAGTAAAAAATACTGGATGTCTAAAACGATCATAC
 
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rJMFF035O05-          TAGAAAATGAAGATTCAATTGACCAACATCAAGACTATACTTTCTAGTTTCTATACCATG
                      ____________________________________________________________
consensus             TAGAAAATGAAGATTCAATTGACCAACATCAAGACTATACTTTCTAGTTTCTATACCATG
 
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rJMFF035O05-          AACGCTACAAGAGACATATTTCAACAATGTAAATTTTAGTTTCCACTTTGGTATATAATG
                      ____________________________________________________________
consensus             AACGCTACAAGAGACATATTTCAACAATGTAAATTTTAGTTTCCACTTTGGTATATAATG
 
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rJMFF035O05-          TCCCAGTTAAGTAACTAGTGCATTTTGCCATCTGCTAGCTTTATTCACACACTAATGGGA
                      ____________________________________________________________
consensus             TCCCAGTTAAGTAACTAGTGCATTTTGCCATCTGCTAGCTTTATTCACACACTAATGGGA
 
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rJMFF035O05-          CCGTCTCGCGCCTCTTTTGTCCTCTTTCCTTGTTGCAGTTGATGAGAAGCTCTGGTTCAG
                      ____________________________________________________________
consensus             CCGTCTCGCGCCTCTTTTGTCCTCTTTCCTTGTTGCAGTTGATGAGAAGCTCTGGTTCAG
 
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rJMFF035O05-          GTTCACACTTGGCTGCTCATTCTGAAATGTTCCGTCTCCATAGATGGGTCTCGTGCTACT
                      ____________________________________________________________
consensus             GTTCACACTTGGCTGCTCATTCTGAAATGTTCCGTCTCCATAGATGGGTCTCGTGCTACT
 
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rJMFF035O05-          AGACTGAGGCACTCTCTCTGTTGAAGGAAGCGCCCAACCTCCCCTGCTTGCCACTCCATT
JMFS103E09+                  GGCACTCTCTCTGTTGAAGGAAGCGCCCAACCTCCCCTGCTTGCCACTCCATT
                      ____________________________________________________________
consensus             AGACTGAGGCACTCTCTCTGTTGAAGGAAGCGCCCAACCTCCCCTGCTTGCCACTCCATT
 
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rJMFF035O05-          CTGAGCATTGCTTCCATCTCCAATAGCACCGTTGGCATTCAACCCCTCGCTCCAACTAGG
JMFS103E09+           CTGAGCATTGCTTCCATCTCCAATAGCACCGTTGGCATTCAACCCCTCGCTCCAACTAGG
                      ____________________________________________________________
consensus             CTGAGCATTGCTTCCATCTCCAATAGCACCGTTGGCATTCAACCCCTCGCTCCAACTAGG
 
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rJMFF035O05-          AAGATGCATTTTAGCTTTCCCCTTCCAATCTTCCTCAAAACTTGAGAGTTCATCTTCATT
JMFS103E09+           AAGATGCATTTTAGCTTTCCCCTTCCAATCTTCCTCAAAACTTGAGAGTTCATCTTCATT
                      ____________________________________________________________
consensus             AAGATGCATTTTAGCTTTCCCCTTCCAATCTTCCTCAAAACTTGAGAGTTCATCTTCATT
 
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rJMFF035O05-          AAGGTTGTGCAAAGTTTGCATTGTATCCACTCTACCATCTGGATTCAGTTTCCGCATGAC
JMFS103E09+           AAGGTTGTGCAAAGTTTGCATTGTATCCACTCTACCATCTGGATTCAGTTTCCGCATGAC
                      ____________________________________________________________
consensus             AAGGTTGTGCAAAGTTTGCATTGTATCCACTCTACCATCTGGATTCAGTTTCCGCATGAC
 
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rJMFF035O05-          AGAATGACCCTTATCATGGATCCCCCTTGAAATCTTATGGCGTGCTTGACCAGTTGCTGA
JMFS103E09+           AGAATGACCCTTATCATGGATCCCCCTTGAAATCTTATGGCGTGCTTGACCAGTTGCTGA
                      ____________________________________________________________
consensus             AGAATGACCCTTATCATGGATCCCCCTTGAAATCTTATGGCGTGCTTGACCAGTTGCTGA
 
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rJMFF035O05-          ATTAGCTTCTTTACTTTCTTCAAATGCCAATCCATCACTCCCTGTCCTCCTG        
JMFS103E09+           ATTAGCTTCTTTACTTTCTTCAAATGCCAATCCATCACTCCCTGTCCTCCTGGTTCTAGA
                      ____________________________________________________________
consensus             ATTAGCTTCTTTACTTTCTTCAAATGCCAATCCATCACTCCCTGTCCTCCTGGTTCTAGA
 
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JMFS103E09+           TGAAGTATAATATGCACCATTAGCCCCGCCATAGGTAACAGTTGAACTCTGGAATGTGAA
                      ____________________________________________________________
consensus             TGAAGTATAATATGCACCATTAGCCCCGCCATAGGTAACAGTTGAACTCTGGAATGTGAA
 
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JMFS103E09+           ACTTTGTCCCTGGGGCTGTGGTTGAAAATGTTGCATCTGCCTCTGCCCAAACTCATTCCC
JMFS095F02+                                 TGAAAATGTTGCATCTGCCTCTGCCCAAACTCATTCCC
                      ____________________________________________________________
consensus             ACTTTGTCCCTGGGGCTGTGGTTGAAAATGTTGCATCTGCCTCTGCCCAAACTCATTCCC
 
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JMFS103E09+           ATAGTGAATATGCTTCCTCCTCCGCTCTTCAGATTCATCATCTGGGTCCTCAACAAAAGG
JMFS095F02+           ATAGTGAATATGCTTCCTCCTCCGCTCTTCAGATTCATCATCTGGGTCCTCAACAAAAGG
JMFF035O05+                                                            TCAACAAAAGG
                      ____________________________________________________________
consensus             ATAGTGAATATGCTTCCTCCTCCGCTCTTCAGATTCATCATCTGGGTCCTCAACAAAAGG
 
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JMFS103E09+           CTCTTCACTCAATCTT-CCATGCTTTC                                 
JMFS095F02+           CTCTTCACTCAATCTT-CCATGCTTTCTTGGATTTCCTTCCATAGTGGTTCTTTCCTTCT
JMFF035O05+           CTCTTCACTCAATCTTCCCATGCTTTCTTGGATTTCCTTCCATAGTGGTTCTTTCCTTCT
                      ____________________________________________________________
consensus             CTCTTCACTCAATCTT-CCATGCTTTCTTGGATTTCCTTCCATAGTGGTTCTTTCCTTCT
 
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JMFS095F02+           CTTCGGTTTCATCATCAGAATTTAATTCTTCAATTATAGGCCCCCGAGATGCAGTGCGTT
JMFF035O05+           CTTCGGTTTCATCATCAGAATTTAATTCTTCAATTATAGGCCCCCGAGATGCAGTGCGTT
                      ____________________________________________________________
consensus             CTTCGGTTTCATCATCAGAATTTAATTCTTCAATTATAGGCCCCCGAGATGCAGTGCGTT
 
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JMFS095F02+           GCGGGAGCTGCTGCTGTTCAAGGAATCCAGTTGGACGTGAGTCCATAAATTGACTTGCAT
JMFF035O05+           GCGGGAGCTGCTGCTGTTCAAGGAATCCAGTTGGACGTGAGTCCATAAATTGACTTCCAT
                      ____________________________________________________________
consensus             GCGGGAGCTGCTGCTGTTCAAGGAATCCAGTTGGACGTGAGTCCATAAATTGACTTGCAT
 
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JMFS095F02+           TAGGCCCAAAAATCCCTGAATTAGGAAATCCAGCTACACGAGAGCCCATAAATTGACTTC
JMFF035O05+           TAGGCCCAAAAATCCCTGAATTAGGAAATCCAGCTACACGAGAGCCCATAAATTGACTTC
                      ____________________________________________________________
consensus             TAGGCCCAAAAATCCCTGAATTAGGAAATCCAGCTACACGAGAGCCCATAAATTGACTTC
 
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JMFS095F02+           CATTAGGCCCAAAAATCCCTGGATTAGGAAATCCAGGTAGATTTGGGCCCACATTCGGAC
JMFF035O05+           CATTAGGCCCAAAAATCCCTGGATTAGGAAATCCAGGTAGATTTGGGCCCACATTCGGAC
                      ____________________________________________________________
consensus             CATTAGGCCCAAAAATCCCTGGATTAGGAAATCCAGGTAGATTTGGGCCCACATTCGGAC
 
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JMFS095F02+           CAAAAAAGCTCGACTCAAACAAGCCCCCAAATGGTTGTGTGAAGAATGGGTCATCAAAAG
JMFF035O05+           CAAAAAAGCTCGACTCAAACAAGCCCCCAAATGGTTGTGTGAAGAATGGGTCATCAAAAG
                      ____________________________________________________________
consensus             CAAAAAAGCTCGACTCAAACAAGCCCCCAAATGGTTGTGTGAAGAATGGGTCATCAAAAG
 
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JMFS095F02+           GATCTCTCCCGCCAAAAAAGCTTGACATTAAACTTCTATGATCTCCAAAACTACCAAAAG
JMFF035O05+           GATCTCTCCCGCCAAAAAAGCTTGACATTAAACTTCTATGATCTCCAAAACTACCAAAAG
                      ____________________________________________________________
consensus             GATCTCTCCCGCCAAAAAAGCTTGACATTAAACTTCTATGATCTCCAAAACTACCAAAAG
 
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JMFS095F02+           GGTTACCAAAGCCAAAGAAAGGATCTCTTCCTCCCTCCATTTCACCTTTGATCAATCTGT
JMFF035O05+           GGTTACCAAAGCCAAAGAAAGGATCTCTTCCTCCCTCCATTTCACCTTTGATCAATCTGT
                      ____________________________________________________________
consensus             GGTTACCAAAGCCAAAGAAAGGATCTCTTCCTCCCTCCATTTCACCTTTGATCAATCTGT
 
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JMFS095F02+           CCTG                                                        
JMFF035O05+           CCTGTCGACGAGAGAGTGAAAAGGGAAGCTCAGCAATGGAGAAAACTTGAAGCCTTAGTT
                      ____________________________________________________________
consensus             CCTGTCGACGAGAGAGTGAAAAGGGAAGCTCAGCAATGGAGAAAACTTGAAGCCTTAGTT