Contig 000186:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF019N21Sequence543000186 (4)723010065 (3)ref|XP_009593728.1|2e-93PREDICTED: probable receptor-like protein kinase At5g18500 [Nicotiana tomentosi
JMFF033B16Sequence478000186 (4)713014879ref|XP_009593728.1|1e-44PREDICTED: probable receptor-like protein kinase At5g18500 [Nicotiana tomentosi
JMSF007D01Sequence742000186 (4)emb|CDP15187.1|4e-14unnamed protein product [Coffea canephora]
JMSF042L23Sequence724000186 (4)ref|XP_011092198.1|2e-49PREDICTED: LOW QUALITY PROTEIN: probable receptor-like protein kinase At5g18500701010065 (3)ref|XP_009593728.1|1e-74PREDICTED: probable receptor-like protein kinase At5g18500 [Nicotiana tomentosi

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF042L23+ CGTAAACCAGTGACCCCAACCCAAGTG
                      ____________________________________________________________
consensus CGTAAACCAGTGACCCCAACCCAAGTG
 
. : . : . : . : . : . :
JMSF042L23+ AGAAACCTCGGGCAGGCCGGTTAGAGGAGATGGAGCAGCTATCGGATGCGAGGAGTATTT
                      ____________________________________________________________
consensus AGAAACCTCGGGCAGGCCGGTTAGAGGAGATGGAGCAGCTATCGGATGCGAGGAGTATTT
 
. : . : . : . : . : . :
JMSF042L23+ GTGATGAACCGCAAATTTGGCTGAATTCCTTTCTTCTCGTGAATGTGACCCGTGATACTC
                      ____________________________________________________________
consensus GTGATGAACCGCAAATTTGGCTGAATTCCTTTCTTCTCGTGAATGTGACCCGTGATACTC
 
. : . : . : . : . : . :
JMSF042L23+ CTTGTCAACAAGATGAAACGAATCCGATTGACCGTTATTATCGCCATTCTTTGTTTTCCA
                      ____________________________________________________________
consensus CTTGTCAACAAGATGAAACGAATCCGATTGACCGTTATTATCGCCATTCTTTGTTTTCCA
 
. : . : . : . : . : . :
JMSF042L23+ TTCCCCATCAGATTCTTTCTCAGTGGATTTATCTTGAACAGTAGGGAAATTCCCATCTTC
rJMSF007D01+ TCCCCATCAGATTCTTTCTCAGTGGATTTATC-TGAACAGTAGGGAAATTCCCATCTTC
                      ____________________________________________________________
consensus TTCCCCATCAGATTCTTTCTCAGTGGATTTATCTTGAACAGTAGGGAAATTCCCATCTTC
 
. : . : . : . : . : . :
JMSF042L23+ ATTTTTCGACACTTGATCCACCTGAACCTCCTTAATTTCCTTTGAAACTTTCGGAATTTG
rJMSF007D01+ ATTTTTCGACACTTGATCCACCTGAACCTCCTTAATTTCCTTTGAAACTTTCGGAATTTG
                      ____________________________________________________________
consensus ATTTTTCGACACTTGATCCACCTGAACCTCCTTAATTTCCTTTGAAACTTTCGGAATTTG
 
. : . : . : . : . : . :
JMSF042L23+ ACAAAGGGGGAGGCTTTCTTTCGCCCGCATTGATTTCTTCCGCAACGTGAGATAAAAAGT
JMFF019N21+ CCCGCATTGATTTCTTCCGCAACGTGAGATAAAAAGT
rJMSF007D01+ ACAAAGGGGGAGGCTTTCTTTCGCCCGCATTGATTTCTTCCGCAACGTGAGATAAAAAGT
                      ____________________________________________________________
consensus ACAAAGGGGGAGGCTTTCTTTCGCCCGCATTGATTTCTTCCGCAACGTGAGATAAAAAGT
 
. : . : . : . : . : . :
JMSF042L23+ TACTGATAAGAGGATGAATACTATCAAAAAGACAACAATAATCCCAATCAGCTCCCACAC
JMFF019N21+ TACTGATAAGAGGATGAATACTATCAAAAAGACAACAATAATCCCAATCAGCTCCCACAC
rJMSF007D01+ TACTGATAAGAGGATGAATACTATCAAAAAGACAACAATAATCCCAATCAGCTCCCACAC
                      ____________________________________________________________
consensus TACTGATAAGAGGATGAATACTATCAAAAAGACAACAATAATCCCAATCAGCTCCCACAC
 
. : . : . : . : . : . :
JMSF042L23+ CTTGAGCCCAAAAACAGCAGTTTCTTTGGACATACCCTCATTCAGATTAGAGCCCATCTT
JMFF019N21+ CTTGAGCCCAAAAACAGCAGTTTCTTTGGACATACCCTCATTCAGATTAGAACCCATCTT
rJMSF007D01+ CTTGAGCCCAAAAACAGCAGTTTCTTTGGACATACCCTCATTCAGATTAGAACCCATCTT
                      ____________________________________________________________
consensus CTTGAGCCCAAAAACAGCAGTTTCTTTGGACATACCCTCATTCAGATTAGAACCCATCTT
 
. : . : . : . : . : . :
JMSF042L23+ CTTGGATGTCAAAAGACCTTCCAGAAAGACTCAATCTGCAATCTTTAAACCTCAGATCTC
JMFF019N21+ CTTGGATGTCAAAAGACCTTCCAGAAAGACTCAATCTGCAATCTTTAAACCTCAGATCTC
rJMSF007D01+ CTTGGATGTCAAAAGACCTTCCAGAAAGACTCAATCTGCAATCTTTAAACCTCAGATCTC
JMFF033B16+ TGGATGTCAAAAGACCTTCCAGAAAGACTCAATCTGCAATCTTTAAACCTCAGATCTC
                      ____________________________________________________________
consensus CTTGGATGTCAAAAGACCTTCCAGAAAGACTCAATCTGCAATCTTTAAACCTCAGATCTC
 
. : . : . : . : . : . :
JMSF042L23+ TGAAACTCCACCACCATATCCCTTGCTCAGACAATGAAAGGAAGCCCAATTCAATCACAG
JMFF019N21+ TGAAACTCCACCACCATATCCCTTGCTCAGACAATGAAAGGAAGCCCAATTCAATCACAG
rJMSF007D01+ TGAAACTCCACCACCATATCCCTTGCTCAGACAATGAAAGGAAGCCCAATTCAATCACAG
JMFF033B16+ TGAAACTCCACCACCATATCCCTTGCTCAGACAATGAAAGGAAGCCCAATTCAATCACAG
                      ____________________________________________________________
consensus TGAAACTCCACCACCATATCCCTTGCTCAGACAATGAAAGGAAGCCCAATTCAATCACAG
 
. : . : . : . : . : . :
JMSF042L23+ ATCTCAAACCAAGCAAGCCTAACAAAACCCAATGTCCAAAACACCCAAATAAATGAAATA
JMFF019N21+ ATCTCAAACCAAGCAAGCCTAACAAAACCCAATGTCCAAAACACCCAAATAAATGAAATA
rJMSF007D01+ ATCTCAAACCAAGCAAGCCTAACAAAACCCAATGTCCAAAACACCCAAATAAATGAAATA
JMFF033B16+ ATCTCAAACCAAGCAAGCCTAACAAAACCCAATGTCCAAAACACCCAAATAAATGAAATA
                      ____________________________________________________________
consensus ATCTCAAACCAAGCAAGCCTAACAAAACCCAATGTCCAAAACACCCAAATAAATGAAATA
 
. : . : . : . : . : . :
JMSF042L23+ ATCTTGCCTCACAGGAACACCAA
JMFF019N21+ ATCTTGCCTCACAGGAACACCAACTGGTAAAAATCAAGTCTTGATCAAATTCCCAAAGTG
rJMSF007D01+ ATCTTGCCTCACAGGAACACCAACTGGTAAAAATCAAGTCTTGATCAAATTCCCAAAGTG
JMFF033B16+ ATCTTGCCTCACAGGAACACCAACTGGTAAAAATCAAGTCTTGATCAAATTCCCAAAGTG
                      ____________________________________________________________
consensus ATCTTGCCTCACAGGAACACCAACTGGTAAAAATCAAGTCTTGATCAAATTCCCAAAGTG
 
. : . : . : . : . : . :
JMFF019N21+ GGTTTTTACAGCATTGATCGATTTGACACAAAGCCTGAGCAGAGGTGCATAAAAAGTGGT
rJMSF007D01+ GGTTTTTACAGCATTGATCGATTTGACACAAAGCCTGAGCAGAGGTGCATAAAAAGTGGT
JMFF033B16+ GGTTTTTACAGCATTGATCGATTTGACACAAAGCCTGAGCAGAGGTGCATAAAAAGTGGT
                      ____________________________________________________________
consensus GGTTTTTACAGCATTGATCGATTTGACACAAAGCCTGAGCAGAGGTGCATAAAAAGTGGT
 
. : . : . : . : . : . :
JMFF019N21+ TCTGACACCACCACCACCTTCTTCACCTTAATGACAGCTGACCCAACAACAAAGGGGCTG
rJMSF007D01+ TCTGACACCACCACCACCTTCTTCACCTTAATGACAGCTGACCCAACAACAAAGGGGCTG
JMFF033B16+ TCTGACACCACCACCACCTTCTTCACCTTAATGACAGCTGACCCAACAACAAAGGGGCTG
                      ____________________________________________________________
consensus TCTGACACCACCACCACCTTCTTCACCTTAATGACAGCTGACCCAACAACAAAGGGGCTG
 
. : . : . : . : . : . :
JMFF019N21+ CTGTTCTTGCAGGGAGGAGTAAAGAT
rJMSF007D01+ CTGTTCTTGCAGGGAGGAGTAAAGATGCATAAAATTGCAAAATGCTAATGATATCAACTG
JMFF033B16+ CTGTTCTTGCAGGGAGGAGTAAAGATGCATAAAATTGCAAAATGCTAATGATATCAACTG
                      ____________________________________________________________
consensus CTGTTCTTGCAGGGAGGAGTAAAGATGCATAAAATTGCAAAATGCTAATGATATCAACTG
 
. : . : . : . : . : . :
rJMSF007D01+ GCTTAGAAATGTTTCGAGAAATGC
JMFF033B16+ GCTTAGAAATGTTTCGAGAAATGCTACTAGAAGGTAAGGAAGGGTGGAGTTATCAGTGGT
                      ____________________________________________________________
consensus GCTTAGAAATGTTTCGAGAAATGCTACTAGAAGGTAAGGAAGGGTGGAGTTATCAGTGGT