Contig 000164:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005K03Sequence483000164 (7)ref|XP_004237877.1|5e-19PREDICTED: membrane-anchored ubiquitin-fold protein 3 isoform X2 [Solanum lycop800017984ref|XP_009591939.1|1e-62PREDICTED: membrane-anchored ubiquitin-fold protein 6-like [Nicotiana tomentosi
JMFF021N19Sequence463000164 (7)ref|XP_004237877.1|2e-14PREDICTED: membrane-anchored ubiquitin-fold protein 3 isoform X2 [Solanum lycop745000164 (7)ref|XP_009591939.1|3e-63PREDICTED: membrane-anchored ubiquitin-fold protein 6-like [Nicotiana tomentosi
JMFF029C17Sequence585000164 (7)ref|XP_010320147.1|1e-41PREDICTED: membrane-anchored ubiquitin-fold protein 3 isoform X1 [Solanum lycop788000164 (7)ref|XP_009591939.1|9e-63PREDICTED: membrane-anchored ubiquitin-fold protein 6-like [Nicotiana tomentosi
JMFF037L20Sequence566000164 (7)ref|XP_010320147.1|2e-37PREDICTED: membrane-anchored ubiquitin-fold protein 3 isoform X1 [Solanum lycop767000164 (7)ref|XP_009591939.1|7e-63PREDICTED: membrane-anchored ubiquitin-fold protein 6-like [Nicotiana tomentosi

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF021N19-                                      AGAGTATAGCATTCCTTGTCTTAACAACCCAG
rJMFF037L20-                                     TAGAGTATAGCATTCCTTGTCTTAACAACCCAG
rJMFF029C17-                                      AGAGTATAGCATTCCTTGTCTTAACAACCCAG
                      ____________________________________________________________
consensus                                        TAGAGTATAGCATTCCTTGTCTTAACAACCCAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF021N19-          TAACAATGAATTCCAAACTAAAACCCAAAGCCAAACTATGATCTTTTTCAACAATAATGT
rJMFF037L20-          TAACAATGAATTCCAAACTAAAACCCAAAGCCAAACTATGATCTTTTTCAACAATAATGT
rJMFF029C17-          TAACAATGAATTCCAAACTAAAACCCAAAGCCAAACTATGATCTTTTTCAACAATAATGT
                      ____________________________________________________________
consensus             TAACAATGAATTCCAAACTAAAACCCAAAGCCAAACTATGATCTTTTTCAACAATAATGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF021N19-          TTTTTTACATTGTTGGTGCCCACAGAACATAAAATATGAAAAAGGTTGGTTTTCAAAGTT
rJMFF037L20-          TTTTTTACATTGTTGGTGCCCACAGAACATAAAATATGAAAAAGGTTGGTTTTCAAAGTT
rJMFF029C17-          TTTTTTACATTGTTGGTGCCCACAGAACATAAAATATGAAAAAGGTTGGTTTTCAAAGTT
                      ____________________________________________________________
consensus             TTTTTTACATTGTTGGTGCCCACAGAACATAAAATATGAAAAAGGTTGGTTTTCAAAGTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF021N19-          CCTACCAAGCAATCCACCATATCACTTTCTTGCCTTCTGCCAACTTTTACCAGGGAATTC
rJMFF037L20-          CCTACCAAGCAATCCACCATATCACTTTCTTGCCTTCTGCCAACTTTTACCAGGGAATTC
rJMFF029C17-          CCTACCAAGCAATCCACCATATCACTTTCTTGCCTTCTGCCAACTTTTACCAGGGAATTG
                      ____________________________________________________________
consensus             CCTACCAAGCAATCCACCATATCACTTTCTTGCCTTCTGCCAACTTTTACCAGGGAATTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF021N19-          CAATTTGCAAGATCCTGTGTTGATGAGAATGACAAGGTACCACGACTTCAACAATACTAG
rJMFF037L20-          CAATTTGCAAGATCCTGTGTTGATGAGAATGACAAGGTACCACGACTTCAACAATACTAG
rJMFF029C17-          CAATTTGCAAGATCCTGTGTTGATGAGAATGACAAGGTACCACGACTTCAACAATACTAG
                      ____________________________________________________________
consensus             CAATTTGCAAGATCCTGTGTTGATGAGAATGACAAGGTACCACGACTTCAACAATACTAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF021N19-          ATCCCAAGGAACGCCGCCAATTTGTGTTGATAATATAGAACGAAGATGAAGAAGCTGAAT
rJMFF037L20-          ATCCCAAGGAACGCCGCCAATTTGTGTTGATAATATAGAACGAAGATGAAGAAGCTGAAT
rJMFF029C17-          ATCCCAAGGAACGCCGCCAATTTGTGTTGATAATATAGAACGAAGATGAAGAAGCTGAAT
                      ____________________________________________________________
consensus             ATCCCAAGGAACGCCGCCAATTTGTGTTGATAATATAGAACGAAGATGAAGAAGCTGAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF021N19-          TAGGTTATCTGTCAGATGAGTTACAAGATTGAACATGAACACCCGCCCTTTATTGGGGTA
rJMFF037L20-          TAGGTTATCTGTCAGATGAGTTACAAGATTGAACATGAACACCCGCCCTTTATTGGGGTA
rJMFF029C17-          TAGGTTATCTGTCAGATGAGTTACAAGATTGAACATGAACACCCGCCCTTTATTGGGGTA
                      ____________________________________________________________
consensus             TAGGTTATCTGTCAGATGAGTTACAAGATTGAACATGAACACCCGCCCTTTATTGGGGTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF021N19-          TCATCGTGCAGTTTATCATTGTTTTTGTCCACCATGGGAGGGCGCACGACAACATGCATA
rJMFF037L20-          TCATCGTGCAGTTTATCATTGTTTTTGTCCACCATGGGAGGGCGCACGACAACATGCATA
rJMFF029C17-          TCATCGTGCAGTTTATCATTGTTTTTGTCCACCATGGGAGGGCGCACGACAACATGCATA
                      ____________________________________________________________
consensus             TCATCGTGCAGTTTATCATTGTTTTTGTCCACCATGGGAGGGCGCACGACAACATGCATA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF021N19-          GTGATGACACCACCTGCAACTTCAGCGACTGGAAGTCTAGATTCAGAAAGCGTTCTGTTG
rJMFF037L20-          GTGATGACACCACCTGCAACTTCAGCGACTGGAAGTCTAGATTCAGAAAGCGTTCTGTTG
rJMFF029C17-          GTGATGACACCACCTGCAACTTCAGCGACTGGAAGTCTAGATTCAGAAAGCGTTCTGTTG
JMFF037L20+                                             GTCTAGATTCAGAAAGCGTTCTGTTG
JMFF029C17+                          GCAACTTCAGCGACTGGAAGTCTAGATTCAGAAAGCGTTCTGTTG
                      ____________________________________________________________
consensus             GTGATGACACCACCTGCAACTTCAGCGACTGGAAGTCTAGATTCAGAAAGCGTTCTGTTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF021N19-          TTTTCCAGTATCTTTCCAGCATTAATAAGCTTCACATCATTGATCGTCTTGGGTCCATTT
rJMFF037L20-          TTTTCCAGTATCTTTCCAGCATTAATAAGCTTCACATCATTGATCGTCTTGGGTCCATTT
rJMFF029C17-          TTTTCCAGTATCTTTCCAGCATTAATAAGCTTCACATCATTGATCGTCTTGGGTCCATTT
JMFF037L20+           TTTTCCAGTATCTTTCCAGCATTAATAAGCTTCACATCATTGATCGTCTTGGGTCCATTT
JMFF005K03+                                                                    TTT
JMFF029C17+           TTTTCCAGTATCTTTCCAGCATTAATAAGCTTCACATCATTGATCGTCTTGGGTCCATTT
                      ____________________________________________________________
consensus             TTTTCCAGTATCTTTCCAGCATTAATAAGCTTCACATCATTGATCGTCTTGGGTCCATTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF021N19-          TCTTTATCTTTGGGCCATTGTGCAATTATCTTCTCTTTGAGGGATCCCACAGTGCTACTA
rJMFF037L20-          TCTTTATCTTTGGGCCATTGTGCAATTATCTTCTCTTTGAGGGATCCCACAGTGCTACTA
rJMFF029C17-          TCTTTATCTTTGGGCCATTGTGCAATTATCTTCTCTTTGAGGGATCCCACAGTGCTACTA
JMFF037L20+           TCTTTATCTTTGGGCCATTGTGCAATTATCTTCTCTTTGAGGGATCCCACAGTGCTACTA
JMFF005K03+           TCTTTATCTTTGGGCCATTGTGCAATTATCTTCTCTTTGAGGGATCCCACAGTGCTACTA
JMFF021N19+                            TTGTGCAATTATCTTCTCTTTGAGGGATCCCACAGTGCTACTA
JMFF029C17+           TCTTTATCTTTGGGCCATTGTGCAATTATCTTCTCTTTGAGGGATCCCACAGTGCTACTA
                      ____________________________________________________________
consensus             TCTTTATCTTTGGGCCATTGTGCAATTATCTTCTCTTTGAGGGATCCCACAGTGCTACTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF021N19-          NGACTATACTTGTTTGGTCCAATATCACTGCCATCAGCAAGCCTGAATTTGATCTCAACC
rJMFF037L20-          GGACTATACTTGTTTGGTCCAATATCACTGCCATCAGCAAGCCTGAATTTGATCTCAACC
rJMFF029C17-          GGACTATACTTGTTTGGTCCAATATCACTGCCATCAGCAAGCCTGAATTTGATCTCAACC
JMFF037L20+           GGACTATACTTGTTTGGTCCAATATCACTGCCATCAGCAAGCCTGAATTTGATCTCAACC
JMFF005K03+           GGACTATACTTGTTTGGTCCAATATCACTGCCATCAGCAAGCCTGAATTTGATCTCAACC
JMFF021N19+           GGACTATACTTGTTTGGTCCAATATCACTGCCATCAGCAAGCCTGAATTTGATCTCAACC
JMFF029C17+           GGACTATACTTGTTTGGTCCAATATCACTGCCATCAGCAAGCCTGAATTTGATCTCAACC
                      ____________________________________________________________
consensus             GGACTATACTTGTTTGGTCCAATATCACTGCCATCAGCAAGCCTGAATTTGATCTCAACC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF021N19-          AACTCTGCTACAGCCATTGAAACACCTCTTCAGATTCTCATAATACACTACAC       
rJMFF037L20-          AACTCTGCTACAGCCATTGAAACACCTCTTCAGATTCTCATAATACACTACACNAACCAA
rJMFF029C17-          AACTCTGCTACAGCCATTGAAACACCTCTTCAGATTCTCATAATACACTACACAAACCAA
JMFF037L20+           AACTCTGCTACAGCCATTGAAACACCTCTTCAGATTCTCATAATACACTACACAAACCAA
JMFF005K03+           AACTCTGCTACAGCCATTGAAACACCTCTTCAGATTCTCATAATACACTACACAAACCAA
JMFF021N19+           AACTCTGCTACAGCCATTGAAACACCTCTTCAGATTCTCATAATACACTACACAAACCAA
JMFF029C17+           AACTCTGCTACAGCCATTGAAACACCTCTTCAGATTCTCATAATACACTACACAAACCAA
                      ____________________________________________________________
consensus             AACTCTGCTACAGCCATTGAAACACCTCTTCAGATTCTCATAATACACTACACAAACCAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF037L20-          TCCCCTCAGTAACC                                              
rJMFF029C17-          TCCCCTCAGTAACCAGCCTAAATCTTGATCCTATT                         
JMFF037L20+           TCCCCTCAGTAACCAGCCTAAATCTTGATCCTATTCCCCTTCCCCTTCCAAATCAGAAAA
JMFF005K03+           TCCCCTCAGTAACCAGCCTAAATCTTGATCCTATTCCCCTTCCCCTTCCAAATCAGAAAA
JMFF021N19+           TCCCCTCAGTAACCAGCCTAAATCTTGATCCTATTCCCCTTCCCCTTCCAAATCAGAAAA
JMFF029C17+           TCCCCTCAGTAACCAGCCTAAATCTTGATCCTATTCCCCTTCCCCTTCCAAATCAGAAAA
                      ____________________________________________________________
consensus             TCCCCTCAGTAACCAGCCTAAATCTTGATCCTATTCCCCTTCCCCTTCCAAATCAGAAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF037L20+           ATAGAGCCAATATGAACACAAGCCCAGATCAACAACTCAAAATCCCAATAAAATAACAAA
JMFF005K03+           ATAGAGCCAATATGAACACAAGCCCAGATCAACAACTCAAAATCCCAATAAAATAACAAA
JMFF021N19+           ATAGAGCCAATATGAACACAAGCCCAGATCAACAACTCAAAATCCCAATAAAATAACAAA
JMFF029C17+           ATAGAGCCAATATGAACACAAGCCCAGATCAACAACTCAAAATCCCAATAAAATAACAAA
                      ____________________________________________________________
consensus             ATAGAGCCAATATGAACACAAGCCCAGATCAACAACTCAAAATCCCAATAAAATAACAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF037L20+           GACCCAGATCAAGTTTCTCAAAACACACCCTGCATACTCTCACGCTAGACCCAAAGAATG
JMFF005K03+           GACCCAGATCAAGTTTCTCAAAACACACCCTGCATACTCTCACGCTAGACCCAAAGAATG
JMFF021N19+           GACCCAGATCAAGTTTCTCAAAACACACCCTGCATACTCTCACGCTAGACCCAAAGAATG
JMFF029C17+           GACCCAGATCAAGTTTCTCAAAACACACCCTGCATACTCTCACGCTAGACCCAAAGAATG
                      ____________________________________________________________
consensus             GACCCAGATCAAGTTTCTCAAAACACACCCTGCATACTCTCACGCTAGACCCAAAGAATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF037L20+           ACCTAATAATCCACACCCCAGATCAATACTCAAGTACAGAGATGGAAAATCACTGGAGAT
JMFF005K03+           ACCTAATAATCCACACCCCAGATCAATACTCAAGTACAGAGATGGAAAATCACTGGAGAT
JMFF021N19+           ACCTAATAATCCACACCCCAGATCAATACTCAAGTACAGAGATGGAAAATCACTGGAGAT
JMFF029C17+           ACCTAATAATCCACACCCCAGATCAATACTCAAGTACAGAGATGGAAAATCACTGGAGAT
                      ____________________________________________________________
consensus             ACCTAATAATCCACACCCCAGATCAATACTCAAGTACAGAGATGGAAAATCACTGGAGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF037L20+           AAACAAAAATCAATTTGGAAACTTCTTAATAACAGTAACCAAGGAAGGAAGTCTCAATTT
JMFF005K03+           AAACAAAAATCAATTTGGAAACTTCTTAATAACAGTAACCAAGGAAGGAAGTCTCAATTT
JMFF021N19+           AAACAAAAATCAATTTGGAAACTTCTTAATAACAGTAACCAAGGAAGGAAGTCTCAATTT
JMFF029C17+           AAACAAAAATCAATTTGGAAACTTCTTAATAACAGTAACCAAGGAAGGAAGTCTCAATTT
                      ____________________________________________________________
consensus             AAACAAAAATCAATTTGGAAACTTCTTAATAACAGTAACCAAGGAAGGAAGTCTCAATTT