Contig 000161:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF028I08Sequence545000161 (5)ref|XP_004232317.1|186PREDICTED: uncharacterized protein LOC101257032 [Solanum lycopersicum]521000161 (5)ref|XP_004232317.1|186PREDICTED: uncharacterized protein LOC101257032 [Solanum lycopersicum]
JMSF008B02Sequence282004976 (2)685000161 (5)ref|XP_009631034.1|183PREDICTED: uncharacterized protein LOC104120867 [Nicotiana tomentosiformis]
JMSF035H18Sequence631022177688000161 (5)ref|XP_004232317.1|187PREDICTED: uncharacterized protein LOC101257032 [Solanum lycopersicum]
JMSF051F12Sequence679004976 (2)729000161 (5)ref|XP_009631034.1|183PREDICTED: uncharacterized protein LOC104120867 [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF051F12+ GCATACATATTAATCAT
                      ____________________________________________________________
consensus GCATACATATTAATCAT
 
. : . : . : . : . : . :
rJMSF051F12+ TNGTCTTATGAATGTGTCATTAATTGCTGTTTCTTTTATNATAAACAGTTGAAGCTTGAC
rJMSF008B02+ GAAGCTTGAC
                      ____________________________________________________________
consensus TNGTCTTATGAATGTGTCATTAATTGCTGTTTCTTTTATNATAAACAGTTGAAGCTTGAC
 
. : . : . : . : . : . :
rJMSF051F12+ GATTTCTCAAATAGGAAGAGCCCATGGAGGGGCAATTCTTGATTTTGTTAAAGTACGCAA
rJMSF008B02+ GATTTCTCAAATAGGAAGAGCCCATGGAGGGGCAATTCTTGATTTTGTTAAAGTACGCAA
                      ____________________________________________________________
consensus GATTTCTCAAATAGGAAGAGCCCATGGAGGGGCAATTCTTGATTTTGTTAAAGTACGCAA
 
. : . : . : . : . : . :
rJMSF051F12+ GTTTCCTGCTAAAACCGGCTATTTAGCACCAAGGTTGTGCTTGACCGTCGCAAATGGTGG
rJMSF008B02+ GTTTCCTGCTAAAACCGGCTATTTAGCACCAAGGTTGTGCTTGACCGTCGCAAATGGTGG
                      ____________________________________________________________
consensus GTTTCCTGCTAAAACCGGCTATTTAGCACCAAGGTTGTGCTTGACCGTCGCAAATGGTGG
 
. : . : . : . : . : . :
rJMSF051F12+ CTTTAAAGGGGAAAGGAATTGTATTAAAGTTGGTGATGGTGTGATAATTGTTGACCATGG
rJMSF008B02+ CTTTAAAGGGGAAAGGAATTGTATTAAAGTTGGTGATGGTGTGATAATTGTTGACCATGG
                      ____________________________________________________________
consensus CTTTAAAGGGGAAAGGAATTGTATTAAAGTTGGTGATGGTGTGATAATTGTTGACCATGG
 
. : . : . : . : . : . :
rJMSF051F12+ ATCGCGTCGAAAAGAGTCCAATCTTATGCTAAGAGCTGGCAGAGCCTTCTATCAAAGATG
rJMSF008B02+ ATCGCGTCGAAAAGAGTCCAATCTTATGCTAAGAGCTGGCAGAGCCTTCTATCAAAGATG
rJMFF028I08+ GAGCTGGCAGAGCCTTCTATCAAAGATG
rJMSF035H18+ CTGGCAGAGCCTTCTATCAAAGATG
JMFF028I08- GAGCTGGCAGAGCCTTCTATCAAAGATG
                      ____________________________________________________________
consensus ATCGCGTCGAAAAGAGTCCAATCTTATGCTAAGAGCTGGCAGAGCCTTCTATCAAAGATG
 
. : . : . : . : . : . :
rJMSF051F12+ CATTTAATTCCTGTGTTCAACAGGGAGCACGTCGAATTATAGTTTCCCCATTCTTCCTTT
rJMSF008B02+ CATTTAATTCCTGTGTTCAACAGGGAGCACGTCGAATTATAGTTTCCCCATTCTTCCTTT
rJMFF028I08+ CATTTAATTCCTGTGTTCAACAGGGAGCACGTCGAATTATAGTTTCCCCATTCTTCCTTT
rJMSF035H18+ CATTTAATGCTTGTGTTCAACAGGGAGCACGTCGAATTATAGTTTCCCCGTTCTTCCTTT
JMFF028I08- CATTTAATTCCTGTGTTCAACAGGGAGCACGTCGAATTATAGTTTCCCCATTCTTCCTTT
                      ____________________________________________________________
consensus CATTTAATTCCTGTGTTCAACAGGGAGCACGTCGAATTATAGTTTCCCCATTCTTCCTTT
 
. : . : . : . : . : . :
rJMSF051F12+ TTCCTGGACGACACTGGCAACAGGATATTCCTTCACTAACCGCCGAAGCTGCCAAGCTGC
rJMSF008B02+ TTCCTGGACGACACTGGCAACAGGATATTCCTTCACTAACCGCCGAAGCTGCCAAGCTGC
rJMFF028I08+ TTCCTGGACGACACTGGCAACAGGATATTCCTTCACTAACCGCCGAAGCTGCCAAGCTGC
rJMSF035H18+ TTCCTGGACGACACTGGCAACAGGATATTCCTTCACTAACTGCTGAAGCTGCCAAGCTGC
JMFF028I08- TTCCTGGACGACACTGGCAACAGGATATTCCTTCACTAACCGCCGAAGCTGCCAAGCTGC
                      ____________________________________________________________
consensus TTCCTGGACGACACTGGCAACAGGATATTCCTTCACTAACCGCCGAAGCTGCCAAGCTGC
 
. : . : . : . : . : . :
rJMSF051F12+ ATCCTGGGATACCATTCATTATTACTGCACCTCTTGGTGTCCATGAATTGCTTGTGGACG
rJMSF008B02+ ATCCTGGGATACCATTCATTATTACTGCACCTCTTGGTGTCCATGAATTGCTTGTGGACG
rJMFF028I08+ ATCCTGGGATACCATTCATTATTACTGCACCTCTTGGTGTCCATGAATTGCTTGTGGACG
rJMSF035H18+ ATCCTGGGATACCATTCATTATTACTGCACCTCTTGGTGTGCATGAATTGCTTGTGGACG
JMFF028I08- ATCCTGGGATACCATTCATTATTACTGCACCTCTTGGTGTCCATGAATTGCTTGTGGACG
                      ____________________________________________________________
consensus ATCCTGGGATACCATTCATTATTACTGCACCTCTTGGTGTCCATGAATTGCTTGTGGACG
 
. : . : . : . : . : . :
rJMSF051F12+ TTATAAATGACAGACTTGACCATTGCTTAAGTCACATTGATGGGAATGCAGATGAGTGTT
rJMSF008B02+ TTATAAATGACAGACTTGACCATTGCTTAAGTCACATTGATGGGAATGCAGATGAGTGTT
rJMFF028I08+ TTATAAATGACAGACTTGACCATTGCTTAAGTCACATTGATGGGAATGCAGATGAGTGTT
rJMSF035H18+ TTATAAATGACAGAATTGATCATTGCTTAAGTCACATTGATGGGAATGCAGATGAGTGTT
JMFF028I08- TTATAAATGACAGACTTGACCATTGCTTAAGTCACATTGATGGGAATGCAGATGAGTGTT
                      ____________________________________________________________
consensus TTATAAATGACAGACTTGACCATTGCTTAAGTCACATTGATGGGAATGCAGATGAGTGTT
 
. : . : . : . : . : . :
rJMSF051F12+ CAGTTTGTGCTGGTACAGGAAAATGTCAACTTTATGAATAGCATACTTTGAATATCNGAG
rJMSF008B02+ CAGTTTGTGCTGGTACAGGAAAATGTCAACTTTATGAATAGCATACTTTGAATATCTGAG
rJMFF028I08+ CAGTTTGTGCTGGTACAGGAAAATGTCAACTTTATGAATAGCATACTTTGAATATCTGAG
rJMSF035H18+ CAGTTTGTGCTGGAACAGGAAAATGTCAACTTTATGAATAGCATACTTTGAATATCTGAG
JMFF028I08- CAGTTTGTGCTGGTACAGGAAAATGTCAACTTTATGAATAGCATACTTTGAATATCTGAG
                      ____________________________________________________________
consensus CAGTTTGTGCTGGTACAGGAAAATGTCAACTTTATGAATAGCATACTTTGAATATCTGAG
 
. : . : . : . : . : . :
rJMSF051F12+ GATTCCTTGACCTAGATATTNGAAGATGTATTATTCTNTTAACAATAAATACTAACATGG
rJMSF008B02+ GATTCCTTGACCTAGATATTNGAAGATGTATTATTCTNTTAACAATAAATACTAACATGG
rJMFF028I08+ GATTCCTTGACCTAGATATTTGAAGATGTATTATTCTTTTAACAATAAATACT-ACATGG
rJMSF035H18+ GATTCCTTGA
JMFF028I08- GATTCCTTGACCTAGATATTTGAAGATGTATTATTCTTTTAACAATAAATACT-ACATGG
                      ____________________________________________________________
consensus GATTCCTTGACCTAGATATTTGAAGATGTATTATTCTTTTAACAATAAATACT-ACATGG
 
. : . : . : . : . : . :
rJMSF051F12+ TCTGAATATANTTACTGCTTCAGCCTTGNGANTTTTTTAAATTTAAATTCTT
rJMSF008B02+ TCTGAATATANTTACTGCTTCAGCCTTGNGATTTTTTNAAATTTAAATTCTT
rJMFF028I08+ TCTGAATATATTTACTGCTTCAGCCTTGTGATTTTTTTAAATTTAAATTCTTCCTTGTGT
JMFF028I08- TCTGAATATATTTACTGCTTCAGCCTTGTGATTTTTTTAAATTTAAATTCTTCCTTGTGT
                      ____________________________________________________________
consensus TCTGAATATATTTACTGCTTCAGCCTTGTGATTTTTTTAAATTTAAATTCTTCCTTGTGT
 
. : . : . : . : . : . :
rJMFF028I08+ CACCGACTTCTTGTAATATTGATCAA
JMFF028I08- CACCGACTTCTTGTAATATTGATCAATGAAGAAAATTTGCAGTAGTATTTAAAACTTGTA
                      ____________________________________________________________
consensus CACCGACTTCTTGTAATATTGATCAATGAAGAAAATTTGCAGTAGTATTTAAAACTTGTA